RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 SSFA2P28290 1259 aa20.33■□□□□ 0.85
CHD8-211ENST00000556833 N4BP2Q86UW6 1770 aaPredicted RBP20.33■□□□□ 0.84
CHD8-211ENST00000556833 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.32■□□□□ 0.84
CHD8-211ENST00000556833 TIMELESSQ9UNS1 1208 aa20.32■□□□□ 0.84
CHD8-211ENST00000556833 EIF4G2P78344 907 aaKnown RBP eCLIP20.31■□□□□ 0.84
CHD8-211ENST00000556833 ZNF530Q6P9A1 599 aaPredicted RBP20.31■□□□□ 0.84
CHD8-211ENST00000556833 AEBP1Q8IUX7 1158 aa20.31■□□□□ 0.84
CHD8-211ENST00000556833 COL5A3P25940 1745 aaPredicted RBP20.3■□□□□ 0.84
CHD8-211ENST00000556833 SLC4A9Q96Q91 983 aa20.3■□□□□ 0.84
CHD8-211ENST00000556833 CICQ96RK0 1608 aaPredicted RBP20.3■□□□□ 0.84
CHD8-211ENST00000556833 KDM6AO15550 1401 aaPredicted RBP20.29■□□□□ 0.84
CHD8-211ENST00000556833 MMP10P09238 476 aa20.29■□□□□ 0.84
CHD8-211ENST00000556833 HMGB2P26583 209 aaKnown RBP20.29■□□□□ 0.84
CHD8-211ENST00000556833 KDRP35968 1356 aa20.29■□□□□ 0.84
CHD8-211ENST00000556833 C4AP0C0L4 1744 aa20.28■□□□□ 0.84
CHD8-211ENST00000556833 MORC1Q86VD1 984 aa20.28■□□□□ 0.84
CHD8-211ENST00000556833 MYH14Q7Z406 1995 aaKnown RBP20.28■□□□□ 0.84
CHD8-211ENST00000556833 KIAA1551Q9HCM1 1747 aa20.27■□□□□ 0.83
CHD8-211ENST00000556833 PLEKHO1Q53GL0 409 aaPredicted RBP20.26■□□□□ 0.83
CHD8-211ENST00000556833 GPBP1L1Q9HC44 474 aaPredicted RBP20.26■□□□□ 0.83
CHD8-211ENST00000556833 RTCBQ9Y3I0 505 aaKnown RBP20.26■□□□□ 0.83
CHD8-211ENST00000556833 CLSPNQ9HAW4 1339 aa20.26■□□□□ 0.83
CHD8-211ENST00000556833 CEP350Q5VT06 3117 aa20.25■□□□□ 0.83
CHD8-211ENST00000556833 PTCD1O75127 700 aaKnown RBP20.25■□□□□ 0.83
CHD8-211ENST00000556833 CABP4P57796 275 aa20.25■□□□□ 0.83
CHD8-211ENST00000556833 CCER1Q8TC90 406 aaPredicted RBP20.25■□□□□ 0.83
CHD8-211ENST00000556833 KIF13BQ9NQT8 1826 aa20.25■□□□□ 0.83
CHD8-211ENST00000556833 TRAPPC3LQ5T215 181 aa20.24■□□□□ 0.83
CHD8-211ENST00000556833 DCAF5Q96JK2 942 aa20.24■□□□□ 0.83
CHD8-211ENST00000556833 PXDNLA1KZ92 1463 aa20.24■□□□□ 0.83
CHD8-211ENST00000556833 ADCY9O60503 1353 aa20.23■□□□□ 0.83
CHD8-211ENST00000556833 VIRMAQ69YN4 1812 aaKnown RBP20.23■□□□□ 0.83
CHD8-211ENST00000556833 ERVV-2B6SEH9 535 aa20.23■□□□□ 0.83
CHD8-211ENST00000556833 C1orf141Q5JVX7 400 aa20.23■□□□□ 0.83
CHD8-211ENST00000556833 SULT6B1Q6IMI4 303 aa20.23■□□□□ 0.83
CHD8-211ENST00000556833 ZNF831Q5JPB2 1677 aa20.22■□□□□ 0.83
CHD8-211ENST00000556833 TJP1Q07157 1748 aa20.22■□□□□ 0.83
CHD8-211ENST00000556833 A0A0G2JLW4 131 aa20.22■□□□□ 0.83
CHD8-211ENST00000556833 HSP90AB1P08238 724 aaKnown RBP20.22■□□□□ 0.83
CHD8-211ENST00000556833 MTHFSP49914 203 aa20.22■□□□□ 0.83
CHD8-211ENST00000556833 ARHGEF1Q92888 912 aaKnown RBP20.22■□□□□ 0.83
CHD8-211ENST00000556833 SCN11AQ9UI33 1791 aa20.21■□□□□ 0.83
CHD8-211ENST00000556833 BCS1LQ9Y276 419 aa20.21■□□□□ 0.83
CHD8-211ENST00000556833 RFC4P35249 363 aa20.2■□□□□ 0.82
CHD8-211ENST00000556833 KNSTRNQ9Y448 316 aa20.2■□□□□ 0.82
CHD8-211ENST00000556833 GYS1P13807 737 aa20.19■□□□□ 0.82
CHD8-211ENST00000556833 CNGB1Q14028 1251 aaPredicted RBP20.19■□□□□ 0.82
CHD8-211ENST00000556833 AMOTQ4VCS5 1084 aa20.19■□□□□ 0.82
CHD8-211ENST00000556833 NFATC2IPQ8NCF5 419 aa20.19■□□□□ 0.82
CHD8-211ENST00000556833 SRP68Q9UHB9 627 aaKnown RBP20.19■□□□□ 0.82
CHD8-211ENST00000556833 CNTNAP4Q9C0A0 1308 aa20.19■□□□□ 0.82
CHD8-211ENST00000556833 C10orf71Q711Q0 1435 aa20.19■□□□□ 0.82
CHD8-211ENST00000556833 BRCA1P38398 1863 aaKnown RBP20.18■□□□□ 0.82
CHD8-211ENST00000556833 RPS6KA4O75676 772 aa20.17■□□□□ 0.82
CHD8-211ENST00000556833 DPEP1P16444 411 aa20.17■□□□□ 0.82
CHD8-211ENST00000556833 CRKLP46109 303 aaKnown RBP20.17■□□□□ 0.82
CHD8-211ENST00000556833 HMOX1P09601 288 aa20.16■□□□□ 0.82
CHD8-211ENST00000556833 IL13P35225 146 aa20.16■□□□□ 0.82
CHD8-211ENST00000556833 RC3H1Q5TC82 1133 aaKnown RBP20.16■□□□□ 0.82
CHD8-211ENST00000556833 NLGN1Q8N2Q7 840 aa20.16■□□□□ 0.82
CHD8-211ENST00000556833 PARP3Q9Y6F1 533 aa20.16■□□□□ 0.82
CHD8-211ENST00000556833 PLEKHG2Q9H7P9 1386 aa20.16■□□□□ 0.82
CHD8-211ENST00000556833 CCDC87Q9NVE4 849 aa20.15■□□□□ 0.82
CHD8-211ENST00000556833 ADRA2BP18089 450 aa20.14■□□□□ 0.81
CHD8-211ENST00000556833 ARHGAP27Q6ZUM4 889 aa20.14■□□□□ 0.81
CHD8-211ENST00000556833 FCHSD2O94868 740 aa20.13■□□□□ 0.81
CHD8-211ENST00000556833 FKBP8Q14318 412 aa20.13■□□□□ 0.81
CHD8-211ENST00000556833 LGR6Q9HBX8 967 aa20.13■□□□□ 0.81
CHD8-211ENST00000556833 KIF7Q2M1P5 1343 aa20.12■□□□□ 0.81
CHD8-211ENST00000556833 SLC39A6Q13433 755 aa20.12■□□□□ 0.81
CHD8-211ENST00000556833 ADAMTS7Q9UKP4 1686 aa20.11■□□□□ 0.81
CHD8-211ENST00000556833 TGFB2P61812 414 aa20.11■□□□□ 0.81
CHD8-211ENST00000556833 DDR1Q08345 913 aa20.11■□□□□ 0.81
CHD8-211ENST00000556833 AMER1Q5JTC6 1135 aaPredicted RBP20.11■□□□□ 0.81
CHD8-211ENST00000556833 CC2D1BQ5T0F9 858 aaKnown RBP20.11■□□□□ 0.81
CHD8-211ENST00000556833 DNAJC10Q8IXB1 793 aa20.11■□□□□ 0.81
CHD8-211ENST00000556833 KIF3CO14782 793 aa20.1■□□□□ 0.81
CHD8-211ENST00000556833 ARFGEF1Q9Y6D6 1849 aa20.1■□□□□ 0.81
CHD8-211ENST00000556833 USP42Q9H9J4 1324 aaKnown RBP20.09■□□□□ 0.81
CHD8-211ENST00000556833 HSPA6P17066 643 aa20.09■□□□□ 0.81
CHD8-211ENST00000556833 AKAP4Q5JQC9 854 aa20.09■□□□□ 0.81
CHD8-211ENST00000556833 CHRNA5P30532 468 aa20.08■□□□□ 0.81
CHD8-211ENST00000556833 INTS5Q6P9B9 1019 aaKnown RBP20.08■□□□□ 0.81
CHD8-211ENST00000556833 SLC52A2Q9HAB3 445 aa20.08■□□□□ 0.81
CHD8-211ENST00000556833 AFDNP55196 1824 aaKnown RBP20.07■□□□□ 0.8
CHD8-211ENST00000556833 RNMTO43148 476 aaKnown RBP20.07■□□□□ 0.8
CHD8-211ENST00000556833 KCNA3P22001 575 aa20.07■□□□□ 0.8
CHD8-211ENST00000556833 USPL1Q5W0Q7 1092 aa20.07■□□□□ 0.8
CHD8-211ENST00000556833 NMRK2Q9NPI5 230 aa20.06■□□□□ 0.8
CHD8-211ENST00000556833 KCPQ6ZWJ8 1503 aa20.06■□□□□ 0.8
CHD8-211ENST00000556833 MRC1P22897 1456 aa20.05■□□□□ 0.8
CHD8-211ENST00000556833 MTHFSDQ2M296 383 aaKnown RBP20.05■□□□□ 0.8
CHD8-211ENST00000556833 ZPR1O75312 459 aa20.04■□□□□ 0.8
CHD8-211ENST00000556833 C9orf131Q5VYM1 1079 aa20.04■□□□□ 0.8
CHD8-211ENST00000556833 SOS1Q07889 1333 aaPredicted RBP20.03■□□□□ 0.8
CHD8-211ENST00000556833 POLRMTO00411 1230 aaKnown RBP20.03■□□□□ 0.8
CHD8-211ENST00000556833 DIAPH1O60610 1272 aaKnown RBP20.03■□□□□ 0.8
CHD8-211ENST00000556833 PIM2Q9P1W9 311 aa20.03■□□□□ 0.8
CHD8-211ENST00000556833 ZBTB1Q9Y2K1 713 aa20.03■□□□□ 0.8
CHD8-211ENST00000556833 CYP19A1P11511 503 aaPredicted RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms