RNA–Protein interactions for RNA: ENST00000556744.1

MARK3-211, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 1,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-211ENST00000556744 NBPF4Q96M43 638 aa13.03□□□□□ -0.32
MARK3-211ENST00000556744 CAMKK2Q96RR4 588 aa13.03□□□□□ -0.32
MARK3-211ENST00000556744 EMILIN1Q9Y6C2 1016 aa13.03□□□□□ -0.32
MARK3-211ENST00000556744 PARD3Q8TEW0 1356 aa13.02□□□□□ -0.33
MARK3-211ENST00000556744 SMG6Q86US8 1419 aaKnown RBP13.02□□□□□ -0.33
MARK3-211ENST00000556744 TTLL13PA6NNM8 815 aa13.01□□□□□ -0.33
MARK3-211ENST00000556744 HAX1O00165 279 aa13.01□□□□□ -0.33
MARK3-211ENST00000556744 KCNV2Q8TDN2 545 aa13.01□□□□□ -0.33
MARK3-211ENST00000556744 LTV1Q96GA3 475 aaPredicted RBP13.01□□□□□ -0.33
MARK3-211ENST00000556744 KNSTRNQ9Y448 316 aa13.01□□□□□ -0.33
MARK3-211ENST00000556744 NPC1L1Q9UHC9 1359 aa13□□□□□ -0.33
MARK3-211ENST00000556744 EN1Q05925 392 aaPredicted RBP13□□□□□ -0.33
MARK3-211ENST00000556744 RGPD3A6NKT7 1758 aaPredicted RBP12.99□□□□□ -0.33
MARK3-211ENST00000556744 RGPD4Q7Z3J3 1758 aa12.99□□□□□ -0.33
MARK3-211ENST00000556744 PLSCR1O15162 318 aa12.99□□□□□ -0.33
MARK3-211ENST00000556744 MEGF6O75095 1541 aa12.98□□□□□ -0.33
MARK3-211ENST00000556744 APBA3O96018 575 aa12.98□□□□□ -0.33
MARK3-211ENST00000556744 SRCAPQ6ZRS2 3230 aa12.98□□□□□ -0.33
MARK3-211ENST00000556744 PLEKHG2Q9H7P9 1386 aa12.97□□□□□ -0.33
MARK3-211ENST00000556744 SHANK3Q9BYB0 1731 aa12.97□□□□□ -0.33
MARK3-211ENST00000556744 RREB1Q92766 1687 aa12.97□□□□□ -0.33
MARK3-211ENST00000556744 PDE4AP27815 886 aa12.97□□□□□ -0.33
MARK3-211ENST00000556744 EZH2Q15910 746 aaKnown RBP12.97□□□□□ -0.33
MARK3-211ENST00000556744 PTF1AQ7RTS3 328 aa12.97□□□□□ -0.33
MARK3-211ENST00000556744 MORC1Q86VD1 984 aa12.97□□□□□ -0.33
MARK3-211ENST00000556744 BMP2KQ9NSY1 1161 aaPredicted RBP12.97□□□□□ -0.33
MARK3-211ENST00000556744 ZCRB1Q8TBF4 217 aaKnown RBP12.96□□□□□ -0.33
MARK3-211ENST00000556744 EYA1Q99502 592 aa12.96□□□□□ -0.33
MARK3-211ENST00000556744 NHSQ6T4R5 1651 aa12.96□□□□□ -0.34
MARK3-211ENST00000556744 GALR2O43603 387 aaPredicted RBP12.95□□□□□ -0.34
MARK3-211ENST00000556744 EIF4A2Q14240 407 aaKnown RBP12.95□□□□□ -0.34
MARK3-211ENST00000556744 E2F4Q16254 413 aa12.95□□□□□ -0.34
MARK3-211ENST00000556744 KCNQ2O43526 872 aa12.94□□□□□ -0.34
MARK3-211ENST00000556744 USHBP1Q8N6Y0 703 aa12.94□□□□□ -0.34
MARK3-211ENST00000556744 RAPGEF4Q8WZA2 1011 aa12.94□□□□□ -0.34
MARK3-211ENST00000556744 ARHGEF1Q92888 912 aaKnown RBP12.94□□□□□ -0.34
MARK3-211ENST00000556744 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.94□□□□□ -0.342e-6■■■□□ 15.5
MARK3-211ENST00000556744 IGSF1Q8N6C5 1336 aa12.93□□□□□ -0.34
MARK3-211ENST00000556744 PPM1GO15355 546 aaPredicted RBP12.93□□□□□ -0.34
MARK3-211ENST00000556744 TATP17735 454 aaPredicted RBP12.93□□□□□ -0.34
MARK3-211ENST00000556744 TNNT2P45379 298 aaPredicted RBP12.93□□□□□ -0.34
MARK3-211ENST00000556744 NUP188Q5SRE5 1749 aa12.93□□□□□ -0.34
MARK3-211ENST00000556744 PKD1L3Q7Z443 1732 aa12.93□□□□□ -0.34
MARK3-211ENST00000556744 DDX54Q8TDD1 881 aaKnown RBP12.92□□□□□ -0.34
MARK3-211ENST00000556744 TRIM35Q9UPQ4 493 aa12.92□□□□□ -0.34
MARK3-211ENST00000556744 LARP6Q9BRS8 491 aaKnown RBP12.91□□□□□ -0.34
MARK3-211ENST00000556744 CYP27B1O15528 508 aa12.9□□□□□ -0.34
MARK3-211ENST00000556744 IL13P35225 146 aa12.9□□□□□ -0.34
MARK3-211ENST00000556744 CRISPLD2Q9H0B8 497 aa12.9□□□□□ -0.34
MARK3-211ENST00000556744 KDRP35968 1356 aa12.9□□□□□ -0.34
MARK3-211ENST00000556744 KAT6BQ8WYB5 2073 aa12.9□□□□□ -0.34
MARK3-211ENST00000556744 BTAF1O14981 1849 aa12.9□□□□□ -0.34
MARK3-211ENST00000556744 PCDH11XQ9BZA7 1347 aa12.89□□□□□ -0.35
MARK3-211ENST00000556744 PCDH11YQ9BZA8 1340 aa12.89□□□□□ -0.35
MARK3-211ENST00000556744 MTHFSP49914 203 aa12.89□□□□□ -0.35
MARK3-211ENST00000556744 MFSD10Q14728 455 aa12.89□□□□□ -0.35
MARK3-211ENST00000556744 ACSBG1Q96GR2 724 aa12.89□□□□□ -0.35
MARK3-211ENST00000556744 TXNRD1Q16881 649 aa12.88□□□□□ -0.35
MARK3-211ENST00000556744 TULP1O00294 542 aaPredicted RBP12.87□□□□□ -0.35
MARK3-211ENST00000556744 PRIM1P49642 420 aaKnown RBP12.87□□□□□ -0.35
MARK3-211ENST00000556744 CC2D1BQ5T0F9 858 aaKnown RBP12.87□□□□□ -0.35
MARK3-211ENST00000556744 NBPF14Q5TI25 921 aa12.87□□□□□ -0.35
MARK3-211ENST00000556744 DDX27Q96GQ7 796 aaKnown RBP12.87□□□□□ -0.35
MARK3-211ENST00000556744 SPG7Q9UQ90 795 aa12.87□□□□□ -0.35
MARK3-211ENST00000556744 DOT1LQ8TEK3 1739 aa12.87□□□□□ -0.35
MARK3-211ENST00000556744 EVX2Q03828 476 aa12.86□□□□□ -0.35
MARK3-211ENST00000556744 R3HDM1Q15032 1099 aaKnown RBP12.86□□□□□ -0.35
MARK3-211ENST00000556744 COL3A1P02461 1466 aaPredicted RBP12.85□□□□□ -0.35
MARK3-211ENST00000556744 PSDA5PKW4 1024 aaPredicted RBP12.85□□□□□ -0.35
MARK3-211ENST00000556744 LY75O60449 1722 aa12.85□□□□□ -0.35
MARK3-211ENST00000556744 LRP5O75197 1615 aa12.84□□□□□ -0.35
MARK3-211ENST00000556744 PAPPAQ13219 1627 aa12.84□□□□□ -0.35
MARK3-211ENST00000556744 PHKG2P15735 406 aa12.84□□□□□ -0.35
MARK3-211ENST00000556744 SLC27A3Q5K4L6 730 aa12.84□□□□□ -0.35
MARK3-211ENST00000556744 IFNL2Q8IZJ0 200 aa12.84□□□□□ -0.35
MARK3-211ENST00000556744 ANO8Q9HCE9 1232 aaPredicted RBP12.84□□□□□ -0.35
MARK3-211ENST00000556744 TOGARAM1Q9Y4F4 1720 aa12.84□□□□□ -0.35
MARK3-211ENST00000556744 ITGB4P16144 1822 aa12.83□□□□□ -0.35
MARK3-211ENST00000556744 AMOTQ4VCS5 1084 aa12.83□□□□□ -0.36
MARK3-211ENST00000556744 AEBP1Q8IUX7 1158 aa12.83□□□□□ -0.36
MARK3-211ENST00000556744 LRRC4BQ9NT99 713 aa12.83□□□□□ -0.36
MARK3-211ENST00000556744 DIAPH1O60610 1272 aaKnown RBP12.82□□□□□ -0.36
MARK3-211ENST00000556744 PLEKHO1Q53GL0 409 aaPredicted RBP12.82□□□□□ -0.36
MARK3-211ENST00000556744 SULT6B1Q6IMI4 303 aa12.82□□□□□ -0.36
MARK3-211ENST00000556744 ZEB1P37275 1124 aaPredicted RBP12.81□□□□□ -0.36
MARK3-211ENST00000556744 ATN1P54259 1190 aaPredicted RBP12.81□□□□□ -0.36
MARK3-211ENST00000556744 SLC15A2Q16348 729 aa12.81□□□□□ -0.36
MARK3-211ENST00000556744 IER5LQ5T953 404 aa12.81□□□□□ -0.36
MARK3-211ENST00000556744 ASTLQ6HA08 431 aaPredicted RBP12.81□□□□□ -0.36
MARK3-211ENST00000556744 CASZ1Q86V15 1759 aa12.81□□□□□ -0.36
MARK3-211ENST00000556744 ATMINO43313 823 aaPredicted RBP12.8□□□□□ -0.36
MARK3-211ENST00000556744 HSP90AB1P08238 724 aaKnown RBP12.8□□□□□ -0.36
MARK3-211ENST00000556744 PPP2R1AP30153 589 aa12.8□□□□□ -0.36
MARK3-211ENST00000556744 PIGBQ92521 554 aa12.8□□□□□ -0.36
MARK3-211ENST00000556744 SYTL4Q96C24 671 aaPredicted RBP12.8□□□□□ -0.36
MARK3-211ENST00000556744 ARIH1Q9Y4X5 557 aaPredicted RBP12.8□□□□□ -0.36
MARK3-211ENST00000556744 ERVV-2B6SEH9 535 aa12.79□□□□□ -0.36
MARK3-211ENST00000556744 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.79□□□□□ -0.36
MARK3-211ENST00000556744 DCAF5Q96JK2 942 aa12.79□□□□□ -0.36
MARK3-211ENST00000556744 HMGB2P26583 209 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms