RNA–Protein interactions for RNA: ENST00000556618.1

RCCD1-206, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene RCCD1, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-206ENST00000556618 TRIM35Q9UPQ4 493 aa31.66■■■□□ 2.66
RCCD1-206ENST00000556618 TEFQ10587 303 aa31.65■■■□□ 2.66
RCCD1-206ENST00000556618 BAG6P46379 1132 aa31.64■■■□□ 2.66
RCCD1-206ENST00000556618 SENP3-EIF4A1A0A087X0R7 540 aa31.64■■■□□ 2.65
RCCD1-206ENST00000556618 PLSCR1O15162 318 aa31.63■■■□□ 2.65
RCCD1-206ENST00000556618 DEFB132Q7Z7B7 95 aa31.63■■■□□ 2.65
RCCD1-206ENST00000556618 THUMPD2Q9BTF0 503 aaKnown RBP31.63■■■□□ 2.65
RCCD1-206ENST00000556618 EN1Q05925 392 aaPredicted RBP31.61■■■□□ 2.65
RCCD1-206ENST00000556618 ASAP1Q9ULH1 1129 aa31.61■■■□□ 2.65
RCCD1-206ENST00000556618 RGPD3A6NKT7 1758 aaPredicted RBP31.6■■■□□ 2.65
RCCD1-206ENST00000556618 RGPD4Q7Z3J3 1758 aa31.6■■■□□ 2.65
RCCD1-206ENST00000556618 ATG3Q9NT62 314 aa31.6■■■□□ 2.65
RCCD1-206ENST00000556618 NCBP3Q53F19 620 aaKnown RBP31.59■■■□□ 2.65
RCCD1-206ENST00000556618 CAMKK2Q96RR4 588 aa31.59■■■□□ 2.65
RCCD1-206ENST00000556618 LY75O60449 1722 aa31.58■■■□□ 2.65
RCCD1-206ENST00000556618 SMARCC1Q92922 1105 aaPredicted RBP31.58■■■□□ 2.65
RCCD1-206ENST00000556618 TAF7Q15545 349 aaPredicted RBP31.56■■■□□ 2.64
RCCD1-206ENST00000556618 PALLDQ8WX93 1383 aa31.56■■■□□ 2.64
RCCD1-206ENST00000556618 EZH2Q15910 746 aaKnown RBP31.56■■■□□ 2.64
RCCD1-206ENST00000556618 CCDC27Q2M243 656 aa31.56■■■□□ 2.64
RCCD1-206ENST00000556618 PAPPAQ13219 1627 aa31.55■■■□□ 2.64
RCCD1-206ENST00000556618 SALL2Q9Y467 1007 aaPredicted RBP31.55■■■□□ 2.64
RCCD1-206ENST00000556618 SLC39A6Q13433 755 aa31.54■■■□□ 2.64
RCCD1-206ENST00000556618 PROM2Q8N271 834 aa31.54■■■□□ 2.64
RCCD1-206ENST00000556618 BTBD11A6QL63 1104 aa31.53■■■□□ 2.64
RCCD1-206ENST00000556618 NGEFQ8N5V2 710 aa31.52■■■□□ 2.64
RCCD1-206ENST00000556618 TXNRD1Q16881 649 aa31.51■■■□□ 2.64
RCCD1-206ENST00000556618 WWC1Q8IX03 1113 aa31.51■■■□□ 2.64
RCCD1-206ENST00000556618 MIS18AQ9NYP9 233 aa31.5■■■□□ 2.63
RCCD1-206ENST00000556618 RREB1Q92766 1687 aa31.49■■■□□ 2.63
RCCD1-206ENST00000556618 UBR2Q8IWV8 1755 aa31.49■■■□□ 2.63
RCCD1-206ENST00000556618 ZNF790Q6PG37 636 aa31.49■■■□□ 2.63
RCCD1-206ENST00000556618 KDM3BQ7LBC6 1761 aa31.48■■■□□ 2.63
RCCD1-206ENST00000556618 SLC27A3Q5K4L6 730 aa31.47■■■□□ 2.63
RCCD1-206ENST00000556618 TTC5Q8N0Z6 440 aa31.47■■■□□ 2.63
RCCD1-206ENST00000556618 LOC102724428A0A0B4J2F2 783 aa31.47■■■□□ 2.63
RCCD1-206ENST00000556618 KCNQ3O43525 872 aa31.47■■■□□ 2.63
RCCD1-206ENST00000556618 PTCD1O75127 700 aaKnown RBP31.47■■■□□ 2.63
RCCD1-206ENST00000556618 SIK1P57059 783 aa31.47■■■□□ 2.63
RCCD1-206ENST00000556618 CALD1Q05682 793 aaKnown RBP31.47■■■□□ 2.63
RCCD1-206ENST00000556618 RBM42Q9BTD8 480 aaKnown RBP31.47■■■□□ 2.63
RCCD1-206ENST00000556618 LRRC4BQ9NT99 713 aa31.46■■■□□ 2.63
RCCD1-206ENST00000556618 CCNL1Q9UK58 526 aaPredicted RBP31.46■■■□□ 2.63
RCCD1-206ENST00000556618 KCPQ6ZWJ8 1503 aa31.45■■■□□ 2.63
RCCD1-206ENST00000556618 KCNQ4P56696 695 aa31.45■■■□□ 2.63
RCCD1-206ENST00000556618 BABAM1Q9NWV8 329 aa31.45■■■□□ 2.63
RCCD1-206ENST00000556618 SLC4A9Q96Q91 983 aa31.44■■■□□ 2.62
RCCD1-206ENST00000556618 ZNF831Q5JPB2 1677 aa31.44■■■□□ 2.62
RCCD1-206ENST00000556618 CHL1O00533 1208 aa31.43■■■□□ 2.62
RCCD1-206ENST00000556618 LAS1LQ9Y4W2 734 aaKnown RBP31.43■■■□□ 2.62
RCCD1-206ENST00000556618 NUP188Q5SRE5 1749 aa31.43■■■□□ 2.62
RCCD1-206ENST00000556618 TAF1LQ8IZX4 1826 aa31.43■■■□□ 2.62
RCCD1-206ENST00000556618 CFAP44Q96MT7 982 aa31.43■■■□□ 2.62
RCCD1-206ENST00000556618 TSPYL4Q9UJ04 414 aa31.43■■■□□ 2.62
RCCD1-206ENST00000556618 ZNF496Q96IT1 587 aaPredicted RBP31.42■■■□□ 2.62
RCCD1-206ENST00000556618 ZNF853P0CG23 659 aa31.41■■■□□ 2.62
RCCD1-206ENST00000556618 ATP6V1AP38606 617 aa31.41■■■□□ 2.62
RCCD1-206ENST00000556618 WDR63Q8IWG1 891 aa31.41■■■□□ 2.62
RCCD1-206ENST00000556618 IFT57Q9NWB7 429 aa31.41■■■□□ 2.62
RCCD1-206ENST00000556618 GNAI1P63096 354 aa31.39■■■□□ 2.62
RCCD1-206ENST00000556618 FMNL2Q96PY5 1086 aa31.39■■■□□ 2.62
RCCD1-206ENST00000556618 ZNF521Q96K83 1311 aa31.39■■■□□ 2.62
RCCD1-206ENST00000556618 IL16Q14005 1332 aa31.38■■■□□ 2.61
RCCD1-206ENST00000556618 C5P01031 1676 aa31.38■■■□□ 2.61
RCCD1-206ENST00000556618 ITPK1Q13572 414 aa31.38■■■□□ 2.61
RCCD1-206ENST00000556618 VSIG10Q8N0Z9 540 aa31.38■■■□□ 2.61
RCCD1-206ENST00000556618 TJP1Q07157 1748 aa31.37■■■□□ 2.61
RCCD1-206ENST00000556618 HEG1Q9ULI3 1381 aa31.36■■■□□ 2.61
RCCD1-206ENST00000556618 EIF4A1P60842 406 aaKnown RBP31.36■■■□□ 2.61
RCCD1-206ENST00000556618 CICQ96RK0 1608 aaPredicted RBP31.36■■■□□ 2.61
RCCD1-206ENST00000556618 HNRNPUQ00839 825 aaKnown RBP eCLIP31.35■■■□□ 2.61
RCCD1-206ENST00000556618 MBIPQ9NS73 344 aa31.35■■■□□ 2.61
RCCD1-206ENST00000556618 COL5A3P25940 1745 aaPredicted RBP31.34■■■□□ 2.61
RCCD1-206ENST00000556618 HMGB2P26583 209 aaKnown RBP31.33■■■□□ 2.61
RCCD1-206ENST00000556618 LINC00116Q8NCU8 138 aa31.33■■■□□ 2.61
RCCD1-206ENST00000556618 DNAJC10Q8IXB1 793 aa31.32■■■□□ 2.6
RCCD1-206ENST00000556618 C4BP0C0L5 1744 aa31.31■■■□□ 2.6
RCCD1-206ENST00000556618 SNRPA1P09661 255 aaKnown RBP31.3■■■□□ 2.6
RCCD1-206ENST00000556618 MYH14Q7Z406 1995 aaKnown RBP31.3■■■□□ 2.6
RCCD1-206ENST00000556618 NBPF14Q5TI25 921 aa31.3■■■□□ 2.6
RCCD1-206ENST00000556618 SPINK5Q9NQ38 1064 aaPredicted RBP31.3■■■□□ 2.6
RCCD1-206ENST00000556618 TEX13AQ9BXU3 409 aaPredicted RBP31.29■■■□□ 2.6
RCCD1-206ENST00000556618 ANO8Q9HCE9 1232 aaPredicted RBP31.29■■■□□ 2.6
RCCD1-206ENST00000556618 PRAMEF22A3QJZ6 481 aa31.28■■■□□ 2.6
RCCD1-206ENST00000556618 GOLGA2Q08379 1002 aa31.28■■■□□ 2.6
RCCD1-206ENST00000556618 TSR2Q969E8 191 aaKnown RBP31.28■■■□□ 2.6
RCCD1-206ENST00000556618 GIGYF1O75420 1035 aaPredicted RBP31.27■■■□□ 2.6
RCCD1-206ENST00000556618 AKT1S1Q96B36 256 aa31.27■■■□□ 2.6
RCCD1-206ENST00000556618 CYP19A1P11511 503 aaPredicted RBP31.26■■■□□ 2.6
RCCD1-206ENST00000556618 ZNF827Q17R98 1081 aa31.26■■■□□ 2.59
RCCD1-206ENST00000556618 STK32BQ9NY57 414 aa31.26■■■□□ 2.59
RCCD1-206ENST00000556618 USP16Q9Y5T5 823 aa31.26■■■□□ 2.59
RCCD1-206ENST00000556618 SLC15A2Q16348 729 aa31.25■■■□□ 2.59
RCCD1-206ENST00000556618 KRT24Q2M2I5 525 aa31.25■■■□□ 2.59
RCCD1-206ENST00000556618 STARD3NLO95772 234 aa31.24■■■□□ 2.59
RCCD1-206ENST00000556618 CRKLP46109 303 aaKnown RBP31.24■■■□□ 2.59
RCCD1-206ENST00000556618 RC3H1Q5TC82 1133 aaKnown RBP31.24■■■□□ 2.59
RCCD1-206ENST00000556618 CNTNAP4Q9C0A0 1308 aa31.24■■■□□ 2.59
RCCD1-206ENST00000556618 MYH16Q9H6N6 1097 aa31.23■■■□□ 2.59
RCCD1-206ENST00000556618 FANCIQ9NVI1 1328 aa31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms