RNA–Protein interactions for RNA: ENST00000556567.5

TTC8-213, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 2

Gene TTC8, Length 943 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-213ENST00000556567 MMP10P09238 476 aa17.41■□□□□ 0.38
TTC8-213ENST00000556567 FLT4P35916 1363 aa17.4■□□□□ 0.38
TTC8-213ENST00000556567 C10orf71Q711Q0 1435 aa17.4■□□□□ 0.38
TTC8-213ENST00000556567 SMG6Q86US8 1419 aaKnown RBP17.4■□□□□ 0.38
TTC8-213ENST00000556567 HMGB2P26583 209 aaKnown RBP17.4■□□□□ 0.38
TTC8-213ENST00000556567 HTRA3P83110 453 aa17.4■□□□□ 0.38
TTC8-213ENST00000556567 COL13A1Q5TAT6 717 aaPredicted RBP17.4■□□□□ 0.38
TTC8-213ENST00000556567 SLC4A9Q96Q91 983 aa17.4■□□□□ 0.38
TTC8-213ENST00000556567 N4BP2Q86UW6 1770 aaPredicted RBP17.39■□□□□ 0.37
TTC8-213ENST00000556567 A0A0G2JLW4 131 aa17.39■□□□□ 0.37
TTC8-213ENST00000556567 GNPATO15228 680 aa17.39■□□□□ 0.37
TTC8-213ENST00000556567 KIF24Q5T7B8 1368 aa17.39■□□□□ 0.37
TTC8-213ENST00000556567 KCNA3P22001 575 aa17.38■□□□□ 0.37
TTC8-213ENST00000556567 JMYQ8N9B5 988 aa17.38■□□□□ 0.37
TTC8-213ENST00000556567 EMILIN1Q9Y6C2 1016 aa17.38■□□□□ 0.37
TTC8-213ENST00000556567 KDRP35968 1356 aa17.38■□□□□ 0.37
TTC8-213ENST00000556567 TGFB2P61812 414 aa17.37■□□□□ 0.37
TTC8-213ENST00000556567 ATG3Q9NT62 314 aa17.37■□□□□ 0.37
TTC8-213ENST00000556567 WDR90Q96KV7 1748 aa17.37■□□□□ 0.37
TTC8-213ENST00000556567 DPEP1P16444 411 aa17.36■□□□□ 0.37
TTC8-213ENST00000556567 BCS1LQ9Y276 419 aa17.36■□□□□ 0.37
TTC8-213ENST00000556567 BRCA1P38398 1863 aaKnown RBP17.35■□□□□ 0.37
TTC8-213ENST00000556567 ATP6V1AP38606 617 aa17.35■□□□□ 0.37
TTC8-213ENST00000556567 CARD14Q9BXL6 1004 aa17.35■□□□□ 0.37
TTC8-213ENST00000556567 TONSLQ96HA7 1378 aa17.35■□□□□ 0.37
TTC8-213ENST00000556567 RBM46Q8TBY0 533 aaKnown RBP17.34■□□□□ 0.37
TTC8-213ENST00000556567 KLRG1Q96E93 195 aa17.34■□□□□ 0.37
TTC8-213ENST00000556567 ARHGAP27Q6ZUM4 889 aa17.33■□□□□ 0.36
TTC8-213ENST00000556567 TMOD3Q9NYL9 352 aa17.33■□□□□ 0.36
TTC8-213ENST00000556567 GYS1P13807 737 aa17.32■□□□□ 0.36
TTC8-213ENST00000556567 PHKG2P15735 406 aa17.32■□□□□ 0.36
TTC8-213ENST00000556567 ARHGEF1Q92888 912 aaKnown RBP17.32■□□□□ 0.36
TTC8-213ENST00000556567 EYA1Q99502 592 aa17.32■□□□□ 0.36
TTC8-213ENST00000556567 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.32■□□□□ 0.36
TTC8-213ENST00000556567 C4AP0C0L4 1744 aa17.32■□□□□ 0.36
TTC8-213ENST00000556567 ANKRD26Q9UPS8 1709 aa17.32■□□□□ 0.36
TTC8-213ENST00000556567 TMF1P82094 1093 aa17.31■□□□□ 0.36
TTC8-213ENST00000556567 C9orf131Q5VYM1 1079 aa17.31■□□□□ 0.36
TTC8-213ENST00000556567 NLGN1Q8N2Q7 840 aa17.31■□□□□ 0.36
TTC8-213ENST00000556567 SPG7Q9UQ90 795 aa17.31■□□□□ 0.36
TTC8-213ENST00000556567 KIF20BQ96Q89 1820 aa17.31■□□□□ 0.36
TTC8-213ENST00000556567 TRAPPC3LQ5T215 181 aa17.3■□□□□ 0.36
TTC8-213ENST00000556567 KCPQ6ZWJ8 1503 aa17.3■□□□□ 0.36
TTC8-213ENST00000556567 WASHC2AQ641Q2 1341 aa17.29■□□□□ 0.36
TTC8-213ENST00000556567 FCHSD2O94868 740 aa17.29■□□□□ 0.36
TTC8-213ENST00000556567 DCAF5Q96JK2 942 aa17.29■□□□□ 0.36
TTC8-213ENST00000556567 ZNF831Q5JPB2 1677 aa17.29■□□□□ 0.36
TTC8-213ENST00000556567 COL5A3P25940 1745 aaPredicted RBP17.28■□□□□ 0.36
TTC8-213ENST00000556567 RTCBQ9Y3I0 505 aaKnown RBP17.28■□□□□ 0.36
TTC8-213ENST00000556567 MYH14Q7Z406 1995 aaKnown RBP17.28■□□□□ 0.36
TTC8-213ENST00000556567 CNTNAP4Q9C0A0 1308 aa17.27■□□□□ 0.36
TTC8-213ENST00000556567 ARFGEF1Q9Y6D6 1849 aa17.27■□□□□ 0.36
TTC8-213ENST00000556567 FSTL1Q12841 308 aa17.27■□□□□ 0.36
TTC8-213ENST00000556567 RC3H1Q5TC82 1133 aaKnown RBP17.27■□□□□ 0.36
TTC8-213ENST00000556567 IFNL2Q8IZJ0 200 aa17.27■□□□□ 0.36
TTC8-213ENST00000556567 U3KPZ7 1027 aaPredicted RBP17.27■□□□□ 0.36
TTC8-213ENST00000556567 PLEKHG2Q9H7P9 1386 aa17.27■□□□□ 0.35
TTC8-213ENST00000556567 RPS6KA4O75676 772 aa17.26■□□□□ 0.35
TTC8-213ENST00000556567 DDR1Q08345 913 aa17.26■□□□□ 0.35
TTC8-213ENST00000556567 CCDC87Q9NVE4 849 aa17.26■□□□□ 0.35
TTC8-213ENST00000556567 SLC24A1O60721 1099 aa17.25■□□□□ 0.35
TTC8-213ENST00000556567 KDM6AO15550 1401 aaPredicted RBP17.24■□□□□ 0.35
TTC8-213ENST00000556567 PRELPP51888 382 aa17.24■□□□□ 0.35
TTC8-213ENST00000556567 RRAGCQ9HB90 399 aa17.24■□□□□ 0.35
TTC8-213ENST00000556567 POLKQ9UBT6 870 aa17.24■□□□□ 0.35
TTC8-213ENST00000556567 PPM1GO15355 546 aaPredicted RBP17.23■□□□□ 0.35
TTC8-213ENST00000556567 CAPN15O75808 1086 aa17.23■□□□□ 0.35
TTC8-213ENST00000556567 PIM2Q9P1W9 311 aa17.23■□□□□ 0.35
TTC8-213ENST00000556567 SRP68Q9UHB9 627 aaKnown RBP17.23■□□□□ 0.35
TTC8-213ENST00000556567 PARP3Q9Y6F1 533 aa17.23■□□□□ 0.35
TTC8-213ENST00000556567 ADAMTS7Q9UKP4 1686 aa17.23■□□□□ 0.35
TTC8-213ENST00000556567 ERVV-2B6SEH9 535 aa17.22■□□□□ 0.35
TTC8-213ENST00000556567 CHRNA5P30532 468 aa17.22■□□□□ 0.35
TTC8-213ENST00000556567 EIF4A2Q14240 407 aaKnown RBP17.22■□□□□ 0.35
TTC8-213ENST00000556567 FKBP8Q14318 412 aa17.22■□□□□ 0.35
TTC8-213ENST00000556567 RBM42Q9BTD8 480 aaKnown RBP17.22■□□□□ 0.35
TTC8-213ENST00000556567 RNF181Q9P0P0 153 aa17.22■□□□□ 0.35
TTC8-213ENST00000556567 SBF1O95248 1867 aa17.21■□□□□ 0.35
TTC8-213ENST00000556567 RFC4P35249 363 aa17.21■□□□□ 0.35
TTC8-213ENST00000556567 DALRD3Q5D0E6 543 aaKnown RBP17.2■□□□□ 0.34
TTC8-213ENST00000556567 TNS4Q8IZW8 715 aa17.2■□□□□ 0.34
TTC8-213ENST00000556567 KDM2BQ8NHM5 1336 aa17.2■□□□□ 0.34
TTC8-213ENST00000556567 USP42Q9H9J4 1324 aaKnown RBP17.2■□□□□ 0.34
TTC8-213ENST00000556567 C16orf71Q8IYS4 520 aaPredicted RBP17.19■□□□□ 0.34
TTC8-213ENST00000556567 TNRC6CQ9HCJ0 1690 aaKnown RBP17.19■□□□□ 0.34
TTC8-213ENST00000556567 POLRMTO00411 1230 aaKnown RBP17.18■□□□□ 0.34
TTC8-213ENST00000556567 TM4SF1P30408 202 aa17.18■□□□□ 0.34
TTC8-213ENST00000556567 CRKLP46109 303 aaKnown RBP17.18■□□□□ 0.34
TTC8-213ENST00000556567 RASSF7Q02833 373 aa17.17■□□□□ 0.34
TTC8-213ENST00000556567 TJP1Q07157 1748 aa17.16■□□□□ 0.34
TTC8-213ENST00000556567 POTECB2RU33 542 aa17.16■□□□□ 0.34
TTC8-213ENST00000556567 INTS5Q6P9B9 1019 aaKnown RBP17.16■□□□□ 0.34
TTC8-213ENST00000556567 SMC1BQ8NDV3 1235 aa17.16■□□□□ 0.34
TTC8-213ENST00000556567 PTCD1O75127 700 aaKnown RBP17.15■□□□□ 0.34
TTC8-213ENST00000556567 HSPA1AP0DMV8 641 aaKnown RBP17.15■□□□□ 0.34
TTC8-213ENST00000556567 HSPA1BP0DMV9 641 aaKnown RBP17.15■□□□□ 0.34
TTC8-213ENST00000556567 ZC3H4Q9UPT8 1303 aaKnown RBP17.13■□□□□ 0.33
TTC8-213ENST00000556567 GLTPD2A6NH11 291 aa17.12■□□□□ 0.33
TTC8-213ENST00000556567 CABP4P57796 275 aa17.12■□□□□ 0.33
TTC8-213ENST00000556567 AEBP1Q8IUX7 1158 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms