RNA–Protein interactions for RNA: ENST00000556296.1

APEX1-213, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 4

Gene APEX1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-213ENST00000556296 ERVV-2B6SEH9 535 aa17.23■□□□□ 0.35
APEX1-213ENST00000556296 PER1O15534 1290 aaPredicted RBP17.23■□□□□ 0.35
APEX1-213ENST00000556296 AMOTQ4VCS5 1084 aa17.23■□□□□ 0.35
APEX1-213ENST00000556296 CHD4Q14839 1912 aa17.22■□□□□ 0.35
APEX1-213ENST00000556296 LINC00116Q8NCU8 138 aa17.22■□□□□ 0.35
APEX1-213ENST00000556296 DCAF5Q96JK2 942 aa17.22■□□□□ 0.35
APEX1-213ENST00000556296 ASAP1Q9ULH1 1129 aa17.22■□□□□ 0.35
APEX1-213ENST00000556296 RTCBQ9Y3I0 505 aaKnown RBP17.22■□□□□ 0.35
APEX1-213ENST00000556296 IGSF1Q8N6C5 1336 aa17.21■□□□□ 0.35
APEX1-213ENST00000556296 TRAPPC3LQ5T215 181 aa17.21■□□□□ 0.35
APEX1-213ENST00000556296 GPBP1L1Q9HC44 474 aaPredicted RBP17.21■□□□□ 0.35
APEX1-213ENST00000556296 GOLGB1Q14789 3259 aaKnown RBP17.2■□□□□ 0.34
APEX1-213ENST00000556296 ATG3Q9NT62 314 aa17.2■□□□□ 0.34
APEX1-213ENST00000556296 C4BP0C0L5 1744 aa17.19■□□□□ 0.34
APEX1-213ENST00000556296 NPC1L1Q9UHC9 1359 aa17.19■□□□□ 0.34
APEX1-213ENST00000556296 UBR3Q6ZT12 1888 aa17.19■□□□□ 0.34
APEX1-213ENST00000556296 CABP4P57796 275 aa17.19■□□□□ 0.34
APEX1-213ENST00000556296 AMER1Q5JTC6 1135 aaPredicted RBP17.19■□□□□ 0.34
APEX1-213ENST00000556296 C1orf141Q5JVX7 400 aa17.19■□□□□ 0.34
APEX1-213ENST00000556296 NLGN1Q8N2Q7 840 aa17.19■□□□□ 0.34
APEX1-213ENST00000556296 RBM42Q9BTD8 480 aaKnown RBP17.19■□□□□ 0.34
APEX1-213ENST00000556296 ADRA2BP18089 450 aa17.18■□□□□ 0.34
APEX1-213ENST00000556296 ITPK1Q13572 414 aa17.18■□□□□ 0.34
APEX1-213ENST00000556296 MORC1Q86VD1 984 aa17.18■□□□□ 0.34
APEX1-213ENST00000556296 RC3H1Q5TC82 1133 aaKnown RBP17.17■□□□□ 0.34
APEX1-213ENST00000556296 ZNF530Q6P9A1 599 aaPredicted RBP17.17■□□□□ 0.34
APEX1-213ENST00000556296 MMP10P09238 476 aa17.16■□□□□ 0.34
APEX1-213ENST00000556296 RFC4P35249 363 aa17.16■□□□□ 0.34
APEX1-213ENST00000556296 MTHFSP49914 203 aa17.16■□□□□ 0.34
APEX1-213ENST00000556296 TGFB2P61812 414 aa17.16■□□□□ 0.34
APEX1-213ENST00000556296 AMIGO3Q86WK7 504 aa17.16■□□□□ 0.34
APEX1-213ENST00000556296 ATP10DQ9P241 1426 aa17.15■□□□□ 0.34
APEX1-213ENST00000556296 CC2D1BQ5T0F9 858 aaKnown RBP17.15■□□□□ 0.34
APEX1-213ENST00000556296 SMIM5Q71RC9 77 aa17.14■□□□□ 0.33
APEX1-213ENST00000556296 CCDC87Q9NVE4 849 aa17.14■□□□□ 0.33
APEX1-213ENST00000556296 PARP3Q9Y6F1 533 aa17.13■□□□□ 0.33
APEX1-213ENST00000556296 CNTNAP4Q9C0A0 1308 aa17.13■□□□□ 0.33
APEX1-213ENST00000556296 ZNF831Q5JPB2 1677 aa17.13■□□□□ 0.33
APEX1-213ENST00000556296 RPS6KA4O75676 772 aa17.12■□□□□ 0.33
APEX1-213ENST00000556296 ZNF526Q8TF50 670 aaPredicted RBP17.12■□□□□ 0.33
APEX1-213ENST00000556296 KDRP35968 1356 aa17.12■□□□□ 0.33
APEX1-213ENST00000556296 CNGB1Q14028 1251 aaPredicted RBP17.11■□□□□ 0.33
APEX1-213ENST00000556296 SULT6B1Q6IMI4 303 aa17.11■□□□□ 0.33
APEX1-213ENST00000556296 AEBP1Q8IUX7 1158 aa17.11■□□□□ 0.33
APEX1-213ENST00000556296 ARHGEF1Q92888 912 aaKnown RBP17.11■□□□□ 0.33
APEX1-213ENST00000556296 WWC3Q9ULE0 1092 aa17.11■□□□□ 0.33
APEX1-213ENST00000556296 KDM6AO15550 1401 aaPredicted RBP17.11■□□□□ 0.33
APEX1-213ENST00000556296 IL13P35225 146 aa17.1■□□□□ 0.33
APEX1-213ENST00000556296 BCS1LQ9Y276 419 aa17.09■□□□□ 0.33
APEX1-213ENST00000556296 SCN11AQ9UI33 1791 aa17.08■□□□□ 0.33
APEX1-213ENST00000556296 COL5A3P25940 1745 aaPredicted RBP17.08■□□□□ 0.32
APEX1-213ENST00000556296 ADCY9O60503 1353 aa17.08■□□□□ 0.32
APEX1-213ENST00000556296 PTCD1O75127 700 aaKnown RBP17.08■□□□□ 0.32
APEX1-213ENST00000556296 RALBP1Q15311 655 aa17.08■□□□□ 0.32
APEX1-213ENST00000556296 NFATC2IPQ8NCF5 419 aa17.08■□□□□ 0.32
APEX1-213ENST00000556296 GYS1P13807 737 aa17.07■□□□□ 0.32
APEX1-213ENST00000556296 SLC4A9Q96Q91 983 aa17.07■□□□□ 0.32
APEX1-213ENST00000556296 VIRMAQ69YN4 1812 aaKnown RBP17.07■□□□□ 0.32
APEX1-213ENST00000556296 MYH14Q7Z406 1995 aaKnown RBP17.06■□□□□ 0.32
APEX1-213ENST00000556296 A0A0G2JLW4 131 aa17.06■□□□□ 0.32
APEX1-213ENST00000556296 ANP32CO43423 234 aa17.06■□□□□ 0.32
APEX1-213ENST00000556296 FCHSD2O94868 740 aa17.06■□□□□ 0.32
APEX1-213ENST00000556296 HSPA6P17066 643 aa17.06■□□□□ 0.32
APEX1-213ENST00000556296 AKAP4Q5JQC9 854 aa17.06■□□□□ 0.32
APEX1-213ENST00000556296 DIEXFQ68CQ4 756 aaKnown RBP17.06■□□□□ 0.32
APEX1-213ENST00000556296 ARHGAP27Q6ZUM4 889 aa17.06■□□□□ 0.32
APEX1-213ENST00000556296 CRKLP46109 303 aaKnown RBP17.05■□□□□ 0.32
APEX1-213ENST00000556296 ZPR1O75312 459 aa17.04■□□□□ 0.32
APEX1-213ENST00000556296 PRKRIP1Q9H875 184 aaPredicted RBP17.04■□□□□ 0.32
APEX1-213ENST00000556296 PIM2Q9P1W9 311 aa17.04■□□□□ 0.32
APEX1-213ENST00000556296 DPEP1P16444 411 aa17.03■□□□□ 0.32
APEX1-213ENST00000556296 CICQ96RK0 1608 aaPredicted RBP17.03■□□□□ 0.32
APEX1-213ENST00000556296 PXDNLA1KZ92 1463 aa17.02■□□□□ 0.32
APEX1-213ENST00000556296 C10orf71Q711Q0 1435 aa17.02■□□□□ 0.31
APEX1-213ENST00000556296 DALRD3Q5D0E6 543 aaKnown RBP17.01■□□□□ 0.31
APEX1-213ENST00000556296 SLC52A2Q9HAB3 445 aa17.01■□□□□ 0.31
APEX1-213ENST00000556296 ADAMTS7Q9UKP4 1686 aa17.01■□□□□ 0.31
APEX1-213ENST00000556296 MYBBP1AQ9BQG0 1328 aaKnown RBP17■□□□□ 0.31
APEX1-213ENST00000556296 USP42Q9H9J4 1324 aaKnown RBP17■□□□□ 0.31
APEX1-213ENST00000556296 COL3A1P02461 1466 aaPredicted RBP17■□□□□ 0.31
APEX1-213ENST00000556296 PPP2R1AP30153 589 aa17■□□□□ 0.31
APEX1-213ENST00000556296 TJP1Q07157 1748 aa17■□□□□ 0.31
APEX1-213ENST00000556296 C4AP0C0L4 1744 aa16.99■□□□□ 0.31
APEX1-213ENST00000556296 KIF13BQ9NQT8 1826 aa16.99■□□□□ 0.31
APEX1-213ENST00000556296 KIF3CO14782 793 aa16.99■□□□□ 0.31
APEX1-213ENST00000556296 TOMM70O94826 608 aa16.99■□□□□ 0.31
APEX1-213ENST00000556296 C16orf71Q8IYS4 520 aaPredicted RBP16.99■□□□□ 0.31
APEX1-213ENST00000556296 MRC1P22897 1456 aa16.99■□□□□ 0.31
APEX1-213ENST00000556296 DIAPH1O60610 1272 aaKnown RBP16.98■□□□□ 0.31
APEX1-213ENST00000556296 HMOX1P09601 288 aa16.98■□□□□ 0.31
APEX1-213ENST00000556296 APLP1P51693 650 aa16.98■□□□□ 0.31
APEX1-213ENST00000556296 FKBP8Q14318 412 aa16.98■□□□□ 0.31
APEX1-213ENST00000556296 INTS5Q6P9B9 1019 aaKnown RBP16.98■□□□□ 0.31
APEX1-213ENST00000556296 SRP68Q9UHB9 627 aaKnown RBP16.98■□□□□ 0.31
APEX1-213ENST00000556296 RNMTO43148 476 aaKnown RBP16.97■□□□□ 0.31
APEX1-213ENST00000556296 VSIG10Q8N0Z9 540 aa16.97■□□□□ 0.31
APEX1-213ENST00000556296 C9orf131Q5VYM1 1079 aa16.96■□□□□ 0.31
APEX1-213ENST00000556296 DNAJC10Q8IXB1 793 aa16.96■□□□□ 0.31
APEX1-213ENST00000556296 TTC5Q8N0Z6 440 aa16.96■□□□□ 0.31
APEX1-213ENST00000556296 KIAA1551Q9HCM1 1747 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms