RNA–Protein interactions for RNA: ENST00000555962.5

CHD8-210, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-210ENST00000555962 UPF1Q92900 1129 aaKnown RBP eCLIP12.05□□□□□ -0.48
CHD8-210ENST00000555962 RYDENQ9NUL5 291 aaKnown RBP12.05□□□□□ -0.48
CHD8-210ENST00000555962 NHSQ6T4R5 1651 aa12.05□□□□□ -0.48
CHD8-210ENST00000555962 U2SURPO15042 1029 aaKnown RBP12.04□□□□□ -0.48
CHD8-210ENST00000555962 PYGBP11216 843 aa12.04□□□□□ -0.48
CHD8-210ENST00000555962 DLG5Q8TDM6 1919 aa12.03□□□□□ -0.48
CHD8-210ENST00000555962 BTAF1O14981 1849 aa12.03□□□□□ -0.48
CHD8-210ENST00000555962 FAM196AQ6ZSG2 479 aa12.03□□□□□ -0.48
CHD8-210ENST00000555962 DDX54Q8TDD1 881 aaKnown RBP12.03□□□□□ -0.48
CHD8-210ENST00000555962 BCL9O00512 1426 aa12.03□□□□□ -0.48
CHD8-210ENST00000555962 SCN11AQ9UI33 1791 aa12.02□□□□□ -0.48
CHD8-210ENST00000555962 CYP27B1O15528 508 aa12.02□□□□□ -0.49
CHD8-210ENST00000555962 PLEKHG2Q9H7P9 1386 aa12.02□□□□□ -0.49
CHD8-210ENST00000555962 CCDC184Q52MB2 194 aa12.01□□□□□ -0.49
CHD8-210ENST00000555962 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.01□□□□□ -0.492e-7■■■□□ 18
CHD8-210ENST00000555962 NUDCQ9Y266 331 aa12.01□□□□□ -0.49
CHD8-210ENST00000555962 PCDH11XQ9BZA7 1347 aa12.01□□□□□ -0.49
CHD8-210ENST00000555962 PCDH11YQ9BZA8 1340 aa12.01□□□□□ -0.49
CHD8-210ENST00000555962 ANP32CO43423 234 aa12□□□□□ -0.49
CHD8-210ENST00000555962 TRIM37O94972 964 aa12□□□□□ -0.49
CHD8-210ENST00000555962 U2AF1L5P0DN76 240 aaPredicted RBP12□□□□□ -0.49
CHD8-210ENST00000555962 U2AF1Q01081 240 aaKnown RBP eCLIP12□□□□□ -0.49
CHD8-210ENST00000555962 PTF1AQ7RTS3 328 aa12□□□□□ -0.49
CHD8-210ENST00000555962 RSPH6AQ9H0K4 717 aa12□□□□□ -0.49
CHD8-210ENST00000555962 SPG7Q9UQ90 795 aa12□□□□□ -0.49
CHD8-210ENST00000555962 ACSBG1Q96GR2 724 aa11.99□□□□□ -0.49
CHD8-210ENST00000555962 RGPD3A6NKT7 1758 aaPredicted RBP11.98□□□□□ -0.49
CHD8-210ENST00000555962 RGPD4Q7Z3J3 1758 aa11.98□□□□□ -0.49
CHD8-210ENST00000555962 ADAMTS7Q9UKP4 1686 aa11.98□□□□□ -0.49
CHD8-210ENST00000555962 PITPNM1O00562 1244 aa11.98□□□□□ -0.49
CHD8-210ENST00000555962 KCNQ2O43526 872 aa11.98□□□□□ -0.49
CHD8-210ENST00000555962 PHKG2P15735 406 aa11.98□□□□□ -0.49
CHD8-210ENST00000555962 PRKAR2BP31323 418 aa11.98□□□□□ -0.49
CHD8-210ENST00000555962 PLEKHO1Q53GL0 409 aaPredicted RBP11.98□□□□□ -0.49
CHD8-210ENST00000555962 RREB1Q92766 1687 aa11.97□□□□□ -0.49
CHD8-210ENST00000555962 MTHFSDQ2M296 383 aaKnown RBP11.97□□□□□ -0.49
CHD8-210ENST00000555962 AMOTQ4VCS5 1084 aa11.97□□□□□ -0.49
CHD8-210ENST00000555962 ZNF530Q6P9A1 599 aaPredicted RBP11.97□□□□□ -0.49
CHD8-210ENST00000555962 IFNL2Q8IZJ0 200 aa11.97□□□□□ -0.49
CHD8-210ENST00000555962 PHACTR3Q96KR7 559 aa11.97□□□□□ -0.49
CHD8-210ENST00000555962 LY75O60449 1722 aa11.97□□□□□ -0.49
CHD8-210ENST00000555962 KDM6AO15550 1401 aaPredicted RBP11.96□□□□□ -0.49
CHD8-210ENST00000555962 FCHSD2O94868 740 aa11.96□□□□□ -0.49
CHD8-210ENST00000555962 DEFB132Q7Z7B7 95 aa11.96□□□□□ -0.49
CHD8-210ENST00000555962 CCDC125Q86Z20 511 aa11.96□□□□□ -0.49
CHD8-210ENST00000555962 SIPA1L3O60292 1781 aaPredicted RBP11.95□□□□□ -0.5
CHD8-210ENST00000555962 PRIM1P49642 420 aaKnown RBP11.95□□□□□ -0.5
CHD8-210ENST00000555962 NUP188Q5SRE5 1749 aa11.94□□□□□ -0.5
CHD8-210ENST00000555962 PLEKHF1Q96S99 279 aa11.94□□□□□ -0.5
CHD8-210ENST00000555962 APBA3O96018 575 aa11.93□□□□□ -0.5
CHD8-210ENST00000555962 EN1Q05925 392 aaPredicted RBP11.93□□□□□ -0.5
CHD8-210ENST00000555962 SF3B2Q13435 895 aaKnown RBP11.93□□□□□ -0.5
CHD8-210ENST00000555962 AKAP4Q5JQC9 854 aa11.93□□□□□ -0.5
CHD8-210ENST00000555962 C1orf141Q5JVX7 400 aa11.93□□□□□ -0.5
CHD8-210ENST00000555962 MPRIPQ6WCQ1 1025 aa11.93□□□□□ -0.5
CHD8-210ENST00000555962 SYTL4Q96C24 671 aaPredicted RBP11.93□□□□□ -0.5
CHD8-210ENST00000555962 ADAMTS8Q9UP79 889 aa11.93□□□□□ -0.5
CHD8-210ENST00000555962 BAG6P46379 1132 aa11.92□□□□□ -0.5
CHD8-210ENST00000555962 WDR43Q15061 677 aaKnown RBP eCLIP11.92□□□□□ -0.5
CHD8-210ENST00000555962 DIEXFQ68CQ4 756 aaKnown RBP11.92□□□□□ -0.5
CHD8-210ENST00000555962 LGR6Q9HBX8 967 aa11.92□□□□□ -0.5
CHD8-210ENST00000555962 MRS2Q9HD23 443 aa11.92□□□□□ -0.5
CHD8-210ENST00000555962 TAF1LQ8IZX4 1826 aa11.92□□□□□ -0.5
CHD8-210ENST00000555962 MAP3K5Q99683 1374 aa11.92□□□□□ -0.5
CHD8-210ENST00000555962 PAPPAQ13219 1627 aa11.91□□□□□ -0.5
CHD8-210ENST00000555962 HSP90AB1P08238 724 aaKnown RBP11.91□□□□□ -0.5
CHD8-210ENST00000555962 EZH2Q15910 746 aaKnown RBP11.91□□□□□ -0.5
CHD8-210ENST00000555962 CCDC146Q8IYE0 955 aa11.91□□□□□ -0.5
CHD8-210ENST00000555962 GAS2L2Q8NHY3 880 aa11.91□□□□□ -0.5
CHD8-210ENST00000555962 PNISRQ8TF01 805 aaKnown RBP11.91□□□□□ -0.5
CHD8-210ENST00000555962 DCAF5Q96JK2 942 aa11.91□□□□□ -0.5
CHD8-210ENST00000555962 CAMKK2Q96RR4 588 aa11.91□□□□□ -0.5
CHD8-210ENST00000555962 MRC1P22897 1456 aa11.9□□□□□ -0.5
CHD8-210ENST00000555962 RNMTO43148 476 aaKnown RBP11.9□□□□□ -0.5
CHD8-210ENST00000555962 PIGBQ92521 554 aa11.9□□□□□ -0.5
CHD8-210ENST00000555962 GNAT3A8MTJ3 354 aa11.89□□□□□ -0.51
CHD8-210ENST00000555962 ERVV-2B6SEH9 535 aa11.89□□□□□ -0.51
CHD8-210ENST00000555962 PLSCR1O15162 318 aa11.89□□□□□ -0.51
CHD8-210ENST00000555962 ZNF467Q7Z7K2 595 aaPredicted RBP11.89□□□□□ -0.51
CHD8-210ENST00000555962 IL17REQ8NFR9 667 aa11.89□□□□□ -0.51
CHD8-210ENST00000555962 TSPYL2Q9H2G4 693 aaPredicted RBP11.89□□□□□ -0.51
CHD8-210ENST00000555962 UBR2Q8IWV8 1755 aa11.89□□□□□ -0.51
CHD8-210ENST00000555962 MAPK8IP3Q9UPT6 1336 aa11.88□□□□□ -0.51
CHD8-210ENST00000555962 C5P01031 1676 aa11.88□□□□□ -0.51
CHD8-210ENST00000555962 PNNQ9H307 717 aaKnown RBP11.88□□□□□ -0.51
CHD8-210ENST00000555962 TMOD3Q9NYL9 352 aa11.88□□□□□ -0.51
CHD8-210ENST00000555962 TUBGCP6Q96RT7 1819 aa11.88□□□□□ -0.51
CHD8-210ENST00000555962 NEFMP07197 916 aa11.87□□□□□ -0.51
CHD8-210ENST00000555962 CABP4P57796 275 aa11.87□□□□□ -0.51
CHD8-210ENST00000555962 NFE2L2Q16236 605 aa11.87□□□□□ -0.51
CHD8-210ENST00000555962 NFATC2IPQ8NCF5 419 aa11.87□□□□□ -0.51
CHD8-210ENST00000555962 RUNDC1Q96C34 613 aa11.87□□□□□ -0.51
CHD8-210ENST00000555962 CEMIPQ8WUJ3 1361 aa11.87□□□□□ -0.51
CHD8-210ENST00000555962 KDM3BQ7LBC6 1761 aa11.87□□□□□ -0.51
CHD8-210ENST00000555962 TJP1Q07157 1748 aa11.86□□□□□ -0.51
CHD8-210ENST00000555962 DCTN1Q14203 1278 aa11.86□□□□□ -0.51
CHD8-210ENST00000555962 TXNRD1Q16881 649 aa11.86□□□□□ -0.51
CHD8-210ENST00000555962 MCM10Q7L590 875 aa11.86□□□□□ -0.51
CHD8-210ENST00000555962 SLC52A2Q9HAB3 445 aa11.86□□□□□ -0.51
CHD8-210ENST00000555962 ASAP1Q9ULH1 1129 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms