RNA–Protein interactions for RNA: ENST00000555690.5

PPP4R4-204, Transcript of protein phosphatase 4 regulatory subunit 4, human

TSL 3

Gene PPP4R4, Length 680 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R4-204	ENST00000555690	UBR3	Q6ZT12	1888 aa		33.44	■■■□□ 2.94
PPP4R4-204	ENST00000555690	SSFA2	P28290	1259 aa		33.43	■■■□□ 2.94
PPP4R4-204	ENST00000555690	ERVV-2	B6SEH9	535 aa		33.41	■■■□□ 2.94
PPP4R4-204	ENST00000555690	AEBP1	Q8IUX7	1158 aa		33.41	■■■□□ 2.94
PPP4R4-204	ENST00000555690	DCAF5	Q96JK2	942 aa		33.41	■■■□□ 2.94
PPP4R4-204	ENST00000555690	GNPAT	O15228	680 aa		33.4	■■■□□ 2.94
PPP4R4-204	ENST00000555690	HSP90AB1	P08238	724 aa	Known RBP	33.4	■■■□□ 2.94
PPP4R4-204	ENST00000555690	ZNF530	Q6P9A1	599 aa	Predicted RBP	33.4	■■■□□ 2.94
PPP4R4-204	ENST00000555690	GRIN3B	O60391	1043 aa		33.39	■■■□□ 2.94
PPP4R4-204	ENST00000555690	AMOT	Q4VCS5	1084 aa		33.39	■■■□□ 2.94
PPP4R4-204	ENST00000555690	SLC4A9	Q96Q91	983 aa		33.36	■■■□□ 2.93
PPP4R4-204	ENST00000555690	RBM42	Q9BTD8	480 aa	Known RBP	33.36	■■■□□ 2.93
PPP4R4-204	ENST00000555690	KDR	P35968	1356 aa		33.34	■■■□□ 2.93
PPP4R4-204	ENST00000555690	CABP4	P57796	275 aa		33.34	■■■□□ 2.93
PPP4R4-204	ENST00000555690	SULT6B1	Q6IMI4	303 aa		33.34	■■■□□ 2.93
PPP4R4-204	ENST00000555690	KDM6A	O15550	1401 aa	Predicted RBP	33.34	■■■□□ 2.93
PPP4R4-204	ENST00000555690	KIF7	Q2M1P5	1343 aa		33.33	■■■□□ 2.93
PPP4R4-204	ENST00000555690	AMER1	Q5JTC6	1135 aa	Predicted RBP	33.33	■■■□□ 2.93
PPP4R4-204	ENST00000555690	IL13	P35225	146 aa		33.32	■■■□□ 2.92
PPP4R4-204	ENST00000555690	MTHFS	P49914	203 aa		33.32	■■■□□ 2.92
PPP4R4-204	ENST00000555690	C1orf141	Q5JVX7	400 aa		33.31	■■■□□ 2.92
PPP4R4-204	ENST00000555690	RTCB	Q9Y3I0	505 aa	Known RBP	33.29	■■■□□ 2.92
PPP4R4-204	ENST00000555690	TRAPPC3L	Q5T215	181 aa		33.28	■■■□□ 2.92
PPP4R4-204	ENST00000555690	C1QTNF8	P60827	252 aa		33.26	■■■□□ 2.91
PPP4R4-204	ENST00000555690	NFATC2IP	Q8NCF5	419 aa		33.26	■■■□□ 2.91
PPP4R4-204	ENST00000555690	WWC3	Q9ULE0	1092 aa		33.26	■■■□□ 2.91
PPP4R4-204	ENST00000555690	RC3H1	Q5TC82	1133 aa	Known RBP	33.25	■■■□□ 2.91
PPP4R4-204	ENST00000555690	PTCD1	O75127	700 aa	Known RBP	33.24	■■■□□ 2.91
PPP4R4-204	ENST00000555690	MMP10	P09238	476 aa		33.24	■■■□□ 2.91
PPP4R4-204	ENST00000555690	ARHGEF1	Q92888	912 aa	Known RBP	33.23	■■■□□ 2.91
PPP4R4-204	ENST00000555690	ZNF831	Q5JPB2	1677 aa		33.22	■■■□□ 2.91
PPP4R4-204	ENST00000555690	CNTNAP4	Q9C0A0	1308 aa		33.22	■■■□□ 2.91
PPP4R4-204	ENST00000555690	PER1	O15534	1290 aa	Predicted RBP	33.21	■■■□□ 2.91
PPP4R4-204	ENST00000555690	GIGYF1	O75420	1035 aa	Predicted RBP	33.2	■■■□□ 2.91
PPP4R4-204	ENST00000555690	RPS6KA4	O75676	772 aa		33.2	■■■□□ 2.91
PPP4R4-204	ENST00000555690	ADRA2B	P18089	450 aa		33.19	■■■□□ 2.9
PPP4R4-204	ENST00000555690	CC2D1B	Q5T0F9	858 aa	Known RBP	33.19	■■■□□ 2.9
PPP4R4-204	ENST00000555690	NLGN1	Q8N2Q7	840 aa		33.19	■■■□□ 2.9
PPP4R4-204	ENST00000555690	RFC4	P35249	363 aa		33.18	■■■□□ 2.9
PPP4R4-204	ENST00000555690	COL5A3	P25940	1745 aa	Predicted RBP	33.18	■■■□□ 2.9
PPP4R4-204	ENST00000555690	HMOX1	P09601	288 aa		33.17	■■■□□ 2.9
PPP4R4-204	ENST00000555690	AKAP4	Q5JQC9	854 aa		33.17	■■■□□ 2.9
PPP4R4-204	ENST00000555690	SENP3-EIF4A1	A0A087X0R7	540 aa		33.15	■■■□□ 2.9
PPP4R4-204	ENST00000555690	GYS1	P13807	737 aa		33.15	■■■□□ 2.9
PPP4R4-204	ENST00000555690	MYH14	Q7Z406	1995 aa	Known RBP	33.15	■■■□□ 2.9
PPP4R4-204	ENST00000555690	CRKL	P46109	303 aa	Known RBP	33.14	■■■□□ 2.9
PPP4R4-204	ENST00000555690	LGR6	Q9HBX8	967 aa		33.14	■■■□□ 2.9
PPP4R4-204	ENST00000555690	ATP10D	Q9P241	1426 aa		33.13	■■■□□ 2.89
PPP4R4-204	ENST00000555690	SLC52A2	Q9HAB3	445 aa		33.12	■■■□□ 2.89
PPP4R4-204	ENST00000555690	CIC	Q96RK0	1608 aa	Predicted RBP	33.11	■■■□□ 2.89
PPP4R4-204	ENST00000555690	DIAPH1	O60610	1272 aa	Known RBP	33.11	■■■□□ 2.89
PPP4R4-204	ENST00000555690	SCN11A	Q9UI33	1791 aa		33.11	■■■□□ 2.89
PPP4R4-204	ENST00000555690	CNGB1	Q14028	1251 aa	Predicted RBP	33.1	■■■□□ 2.89
PPP4R4-204	ENST00000555690	PXDNL	A1KZ92	1463 aa		33.08	■■■□□ 2.89
PPP4R4-204	ENST00000555690	RNMT	O43148	476 aa	Known RBP	33.08	■■■□□ 2.89
PPP4R4-204	ENST00000555690		A0A0G2JLW4	131 aa		33.07	■■■□□ 2.88
PPP4R4-204	ENST00000555690	TGFB2	P61812	414 aa		33.07	■■■□□ 2.88
PPP4R4-204	ENST00000555690	MTHFSD	Q2M296	383 aa	Known RBP	33.07	■■■□□ 2.88
PPP4R4-204	ENST00000555690	CCDC87	Q9NVE4	849 aa		33.07	■■■□□ 2.88
PPP4R4-204	ENST00000555690	SRP68	Q9UHB9	627 aa	Known RBP	33.07	■■■□□ 2.88
PPP4R4-204	ENST00000555690	PARP3	Q9Y6F1	533 aa		33.07	■■■□□ 2.88
PPP4R4-204	ENST00000555690	C10orf71	Q711Q0	1435 aa		33.05	■■■□□ 2.88
PPP4R4-204	ENST00000555690	SLC39A6	Q13433	755 aa		33.05	■■■□□ 2.88
PPP4R4-204	ENST00000555690	INTS5	Q6P9B9	1019 aa	Known RBP	33.05	■■■□□ 2.88
PPP4R4-204	ENST00000555690	ADCY9	O60503	1353 aa		33.05	■■■□□ 2.88
PPP4R4-204	ENST00000555690	KIF13B	Q9NQT8	1826 aa		33.05	■■■□□ 2.88
PPP4R4-204	ENST00000555690	DNAJC10	Q8IXB1	793 aa		33.04	■■■□□ 2.88
PPP4R4-204	ENST00000555690	GPBP1L1	Q9HC44	474 aa	Predicted RBP	33.04	■■■□□ 2.88
PPP4R4-204	ENST00000555690	C4A	P0C0L4	1744 aa		33.04	■■■□□ 2.88
PPP4R4-204	ENST00000555690	TJP1	Q07157	1748 aa		33.04	■■■□□ 2.88
PPP4R4-204	ENST00000555690	ZNF526	Q8TF50	670 aa	Predicted RBP	33.03	■■■□□ 2.88
PPP4R4-204	ENST00000555690	USP42	Q9H9J4	1324 aa	Known RBP	33.02	■■■□□ 2.88
PPP4R4-204	ENST00000555690	FKBP8	Q14318	412 aa		33.02	■■■□□ 2.88
PPP4R4-204	ENST00000555690	BCS1L	Q9Y276	419 aa		33.02	■■■□□ 2.88
PPP4R4-204	ENST00000555690	N4BP2	Q86UW6	1770 aa	Predicted RBP	33.01	■■■□□ 2.88
PPP4R4-204	ENST00000555690	DPEP1	P16444	411 aa		33.01	■■■□□ 2.87
PPP4R4-204	ENST00000555690	KIAA1551	Q9HCM1	1747 aa		33.01	■■■□□ 2.87
PPP4R4-204	ENST00000555690	NPC1L1	Q9UHC9	1359 aa		33	■■■□□ 2.87
PPP4R4-204	ENST00000555690	MRC1	P22897	1456 aa		32.99	■■■□□ 2.87
PPP4R4-204	ENST00000555690	U2SURP	O15042	1029 aa	Known RBP	32.97	■■■□□ 2.87
PPP4R4-204	ENST00000555690	CYP19A1	P11511	503 aa	Predicted RBP	32.96	■■■□□ 2.87
PPP4R4-204	ENST00000555690	DDR1	Q08345	913 aa		32.96	■■■□□ 2.87
PPP4R4-204	ENST00000555690	COL3A1	P02461	1466 aa	Predicted RBP	32.95	■■■□□ 2.87
PPP4R4-204	ENST00000555690	VIRMA	Q69YN4	1812 aa	Known RBP	32.94	■■■□□ 2.86
PPP4R4-204	ENST00000555690	ZPR1	O75312	459 aa		32.94	■■■□□ 2.86
PPP4R4-204	ENST00000555690	FCHSD2	O94868	740 aa		32.93	■■■□□ 2.86
PPP4R4-204	ENST00000555690	KCNA3	P22001	575 aa		32.93	■■■□□ 2.86
PPP4R4-204	ENST00000555690	SOS1	Q07889	1333 aa	Predicted RBP	32.93	■■■□□ 2.86
PPP4R4-204	ENST00000555690	KCP	Q6ZWJ8	1503 aa		32.92	■■■□□ 2.86
PPP4R4-204	ENST00000555690	USPL1	Q5W0Q7	1092 aa		32.92	■■■□□ 2.86
PPP4R4-204	ENST00000555690	ARHGAP27	Q6ZUM4	889 aa		32.92	■■■□□ 2.86
PPP4R4-204	ENST00000555690	ADAMTS7	Q9UKP4	1686 aa		32.91	■■■□□ 2.86
PPP4R4-204	ENST00000555690	CEP350	Q5VT06	3117 aa		32.91	■■■□□ 2.86
PPP4R4-204	ENST00000555690	ZBTB1	Q9Y2K1	713 aa		32.91	■■■□□ 2.86
PPP4R4-204	ENST00000555690	TM4SF1	P30408	202 aa		32.9	■■■□□ 2.86
PPP4R4-204	ENST00000555690	POLRMT	O00411	1230 aa	Known RBP	32.89	■■■□□ 2.86
PPP4R4-204	ENST00000555690	VSIG10	Q8N0Z9	540 aa		32.89	■■■□□ 2.86
PPP4R4-204	ENST00000555690	PIM2	Q9P1W9	311 aa		32.88	■■■□□ 2.85
PPP4R4-204	ENST00000555690	GNAT3	A8MTJ3	354 aa		32.87	■■■□□ 2.85
PPP4R4-204	ENST00000555690	TTC5	Q8N0Z6	440 aa		32.87	■■■□□ 2.85

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms