RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 CFAP53Q96M91 514 aa12.91□□□□□ -0.34
ACTN1-215ENST00000555616 ATF5Q9Y2D1 282 aaPredicted RBP12.91□□□□□ -0.34
ACTN1-215ENST00000555616 CICQ96RK0 1608 aaPredicted RBP12.91□□□□□ -0.34
ACTN1-215ENST00000555616 SCN11AQ9UI33 1791 aa12.9□□□□□ -0.34
ACTN1-215ENST00000555616 AKAP4Q5JQC9 854 aa12.9□□□□□ -0.34
ACTN1-215ENST00000555616 U2SURPO15042 1029 aaKnown RBP12.89□□□□□ -0.35
ACTN1-215ENST00000555616 CABP4P57796 275 aa12.89□□□□□ -0.35
ACTN1-215ENST00000555616 ITPK1Q13572 414 aa12.89□□□□□ -0.35
ACTN1-215ENST00000555616 RALBP1Q15311 655 aa12.89□□□□□ -0.35
ACTN1-215ENST00000555616 PRKRIP1Q9H875 184 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-215ENST00000555616 MAP3K5Q99683 1374 aa12.89□□□□□ -0.35
ACTN1-215ENST00000555616 MTHFSDQ2M296 383 aaKnown RBP12.88□□□□□ -0.35
ACTN1-215ENST00000555616 COL23A1Q86Y22 540 aaPredicted RBP12.88□□□□□ -0.35
ACTN1-215ENST00000555616 LINC00116Q8NCU8 138 aa12.88□□□□□ -0.35
ACTN1-215ENST00000555616 COL5A3P25940 1745 aaPredicted RBP12.88□□□□□ -0.35
ACTN1-215ENST00000555616 UBR3Q6ZT12 1888 aa12.87□□□□□ -0.35
ACTN1-215ENST00000555616 FLAD1Q8NFF5 587 aa12.87□□□□□ -0.35
ACTN1-215ENST00000555616 AK7Q96M32 723 aa12.87□□□□□ -0.35
ACTN1-215ENST00000555616 SLC4A9Q96Q91 983 aa12.87□□□□□ -0.35
ACTN1-215ENST00000555616 RNMTO43148 476 aaKnown RBP12.86□□□□□ -0.35
ACTN1-215ENST00000555616 ATP6V1AP38606 617 aa12.86□□□□□ -0.35
ACTN1-215ENST00000555616 AMIGO3Q86WK7 504 aa12.86□□□□□ -0.35
ACTN1-215ENST00000555616 MIER1Q8N108 512 aa12.86□□□□□ -0.35
ACTN1-215ENST00000555616 NFATC2IPQ8NCF5 419 aa12.86□□□□□ -0.35
ACTN1-215ENST00000555616 ARXQ96QS3 562 aa12.86□□□□□ -0.35
ACTN1-215ENST00000555616 RSPH6AQ9H0K4 717 aa12.86□□□□□ -0.35
ACTN1-215ENST00000555616 SLC52A2Q9HAB3 445 aa12.86□□□□□ -0.35
ACTN1-215ENST00000555616 NUDCQ9Y266 331 aa12.86□□□□□ -0.35
ACTN1-215ENST00000555616 TJP1Q07157 1748 aa12.85□□□□□ -0.35
ACTN1-215ENST00000555616 KCPQ6ZWJ8 1503 aa12.85□□□□□ -0.35
ACTN1-215ENST00000555616 SSFA2P28290 1259 aa12.85□□□□□ -0.35
ACTN1-215ENST00000555616 GAS2L2Q8NHY3 880 aa12.85□□□□□ -0.35
ACTN1-215ENST00000555616 CNTNAP4Q9C0A0 1308 aa12.85□□□□□ -0.35
ACTN1-215ENST00000555616 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.84□□□□□ -0.35
ACTN1-215ENST00000555616 POLD1P28340 1107 aa12.84□□□□□ -0.35
ACTN1-215ENST00000555616 PRKAR2BP31323 418 aa12.84□□□□□ -0.35
ACTN1-215ENST00000555616 FHDC1Q9C0D6 1143 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-215ENST00000555616 LGR6Q9HBX8 967 aa12.84□□□□□ -0.35
ACTN1-215ENST00000555616 MYBBP1AQ9BQG0 1328 aaKnown RBP12.84□□□□□ -0.35
ACTN1-215ENST00000555616 GNPATO15228 680 aa12.83□□□□□ -0.36
ACTN1-215ENST00000555616 U2AF1L5P0DN76 240 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-215ENST00000555616 U2AF1Q01081 240 aaKnown RBP eCLIP12.83□□□□□ -0.36
ACTN1-215ENST00000555616 RBM42Q9BTD8 480 aaKnown RBP12.83□□□□□ -0.36
ACTN1-215ENST00000555616 CEMIPQ8WUJ3 1361 aa12.82□□□□□ -0.36
ACTN1-215ENST00000555616 UBR2Q8IWV8 1755 aa12.82□□□□□ -0.36
ACTN1-215ENST00000555616 GNAT3A8MTJ3 354 aa12.82□□□□□ -0.36
ACTN1-215ENST00000555616 CCER2I3L3R5 266 aa12.82□□□□□ -0.36
ACTN1-215ENST00000555616 MSH5O43196 834 aa12.82□□□□□ -0.36
ACTN1-215ENST00000555616 FCHSD2O94868 740 aa12.82□□□□□ -0.36
ACTN1-215ENST00000555616 PHF14O94880 888 aa12.82□□□□□ -0.36
ACTN1-215ENST00000555616 RC3H1Q5TC82 1133 aaKnown RBP12.82□□□□□ -0.36
ACTN1-215ENST00000555616 PHACTR3Q96KR7 559 aa12.82□□□□□ -0.36
ACTN1-215ENST00000555616 SYT17Q9BSW7 474 aa12.82□□□□□ -0.36
ACTN1-215ENST00000555616 SIPA1L3O60292 1781 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-215ENST00000555616 PTCD1O75127 700 aaKnown RBP12.81□□□□□ -0.36
ACTN1-215ENST00000555616 MSL1Q68DK7 614 aa12.81□□□□□ -0.36
ACTN1-215ENST00000555616 VIRMAQ69YN4 1812 aaKnown RBP12.81□□□□□ -0.36
ACTN1-215ENST00000555616 ADRA2BP18089 450 aa12.8□□□□□ -0.36
ACTN1-215ENST00000555616 SMIM5Q71RC9 77 aa12.8□□□□□ -0.36
ACTN1-215ENST00000555616 IL17REQ8NFR9 667 aa12.79□□□□□ -0.36
ACTN1-215ENST00000555616 RTCBQ9Y3I0 505 aaKnown RBP12.79□□□□□ -0.36
ACTN1-215ENST00000555616 C4AP0C0L4 1744 aa12.79□□□□□ -0.36
ACTN1-215ENST00000555616 RPS6KA4O75676 772 aa12.78□□□□□ -0.36
ACTN1-215ENST00000555616 YY1P25490 414 aa12.78□□□□□ -0.36
ACTN1-215ENST00000555616 CRKLP46109 303 aaKnown RBP12.78□□□□□ -0.36
ACTN1-215ENST00000555616 TEFQ10587 303 aa12.78□□□□□ -0.36
ACTN1-215ENST00000555616 SLC39A6Q13433 755 aa12.78□□□□□ -0.36
ACTN1-215ENST00000555616 DNAJC10Q8IXB1 793 aa12.77□□□□□ -0.37
ACTN1-215ENST00000555616 VSIG10Q8N0Z9 540 aa12.77□□□□□ -0.37
ACTN1-215ENST00000555616 MYH14Q7Z406 1995 aaKnown RBP12.76□□□□□ -0.37
ACTN1-215ENST00000555616 DCAF8L1A6NGE4 600 aa12.76□□□□□ -0.37
ACTN1-215ENST00000555616 TRAPPC3LQ5T215 181 aa12.76□□□□□ -0.37
ACTN1-215ENST00000555616 INTS5Q6P9B9 1019 aaKnown RBP12.76□□□□□ -0.37
ACTN1-215ENST00000555616 MRS2Q9HD23 443 aa12.76□□□□□ -0.37
ACTN1-215ENST00000555616 HTATSF1O43719 755 aaKnown RBP12.75□□□□□ -0.37
ACTN1-215ENST00000555616 CYP19A1P11511 503 aaPredicted RBP12.75□□□□□ -0.37
ACTN1-215ENST00000555616 ZNF790Q6PG37 636 aa12.75□□□□□ -0.37
ACTN1-215ENST00000555616 TTC5Q8N0Z6 440 aa12.75□□□□□ -0.37
ACTN1-215ENST00000555616 KLHL34Q8N239 644 aa12.75□□□□□ -0.37
ACTN1-215ENST00000555616 NLGN2Q8NFZ4 835 aa12.75□□□□□ -0.37
ACTN1-215ENST00000555616 ARHGEF1Q92888 912 aaKnown RBP12.75□□□□□ -0.37
ACTN1-215ENST00000555616 PLEKHF1Q96S99 279 aa12.75□□□□□ -0.37
ACTN1-215ENST00000555616 CCDC87Q9NVE4 849 aa12.75□□□□□ -0.37
ACTN1-215ENST00000555616 HEG1Q9ULI3 1381 aa12.75□□□□□ -0.37
ACTN1-215ENST00000555616 SOS1Q07889 1333 aaPredicted RBP12.74□□□□□ -0.37
ACTN1-215ENST00000555616 USP42Q9H9J4 1324 aaKnown RBP12.74□□□□□ -0.37
ACTN1-215ENST00000555616 GYS1P13807 737 aa12.74□□□□□ -0.37
ACTN1-215ENST00000555616 ZNF496Q96IT1 587 aaPredicted RBP12.74□□□□□ -0.37
ACTN1-215ENST00000555616 CD2APQ9Y5K6 639 aa12.74□□□□□ -0.37
ACTN1-215ENST00000555616 C10orf71Q711Q0 1435 aa12.73□□□□□ -0.37
ACTN1-215ENST00000555616 MMP10P09238 476 aa12.73□□□□□ -0.37
ACTN1-215ENST00000555616 RFC4P35249 363 aa12.73□□□□□ -0.37
ACTN1-215ENST00000555616 MCM10Q7L590 875 aa12.73□□□□□ -0.37
ACTN1-215ENST00000555616 NLGN1Q8N2Q7 840 aa12.73□□□□□ -0.37
ACTN1-215ENST00000555616 RTF1Q92541 710 aaKnown RBP12.73□□□□□ -0.37
ACTN1-215ENST00000555616 COL15A1P39059 1388 aa12.72□□□□□ -0.37
ACTN1-215ENST00000555616 NEFMP07197 916 aa12.72□□□□□ -0.37
ACTN1-215ENST00000555616 ZBTB1Q9Y2K1 713 aa12.72□□□□□ -0.37
ACTN1-215ENST00000555616 MAPK8IP3Q9UPT6 1336 aa12.71□□□□□ -0.37
ACTN1-215ENST00000555616 BTBD11A6QL63 1104 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms