RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 TWISTNBQ3B726 338 aaPredicted RBP12.46□□□□□ -0.42
PRKCH-211ENST00000555082 L1TD1Q5T7N2 865 aaKnown RBP12.46□□□□□ -0.42
PRKCH-211ENST00000555082 ANTXR1Q9H6X2 564 aa12.46□□□□□ -0.42
PRKCH-211ENST00000555082 RLBP1P12271 317 aa12.45□□□□□ -0.42
PRKCH-211ENST00000555082 C1orf141Q5JVX7 400 aa12.45□□□□□ -0.42
PRKCH-211ENST00000555082 PDZRN3Q9UPQ7 1066 aa12.45□□□□□ -0.42
PRKCH-211ENST00000555082 NCAPD2Q15021 1401 aa12.45□□□□□ -0.42
PRKCH-211ENST00000555082 NECTIN2Q92692 538 aa12.45□□□□□ -0.42
PRKCH-211ENST00000555082 AMOTQ4VCS5 1084 aa12.44□□□□□ -0.42
PRKCH-211ENST00000555082 AKAP4Q5JQC9 854 aa12.44□□□□□ -0.42
PRKCH-211ENST00000555082 UPF2Q9HAU5 1272 aaKnown RBP12.44□□□□□ -0.42
PRKCH-211ENST00000555082 CYP27B1O15528 508 aa12.44□□□□□ -0.42
PRKCH-211ENST00000555082 ABCA3Q99758 1704 aa12.44□□□□□ -0.42
PRKCH-211ENST00000555082 GOLGA6L3A6NEY3 463 aa12.44□□□□□ -0.42
PRKCH-211ENST00000555082 RNMTO43148 476 aaKnown RBP12.44□□□□□ -0.42
PRKCH-211ENST00000555082 NOB1Q9ULX3 412 aaKnown RBP12.44□□□□□ -0.42
PRKCH-211ENST00000555082 PHLPP1O60346 1717 aa12.43□□□□□ -0.42
PRKCH-211ENST00000555082 COL16A1Q07092 1604 aaPredicted RBP12.43□□□□□ -0.42
PRKCH-211ENST00000555082 PDE3AQ14432 1141 aa12.43□□□□□ -0.42
PRKCH-211ENST00000555082 HTATSF1O43719 755 aaKnown RBP12.42□□□□□ -0.42
PRKCH-211ENST00000555082 TAF7Q15545 349 aaPredicted RBP12.42□□□□□ -0.42
PRKCH-211ENST00000555082 DDX54Q8TDD1 881 aaKnown RBP12.42□□□□□ -0.42
PRKCH-211ENST00000555082 TBC1D32Q96NH3 1257 aa12.42□□□□□ -0.42
PRKCH-211ENST00000555082 PHKG2P15735 406 aa12.42□□□□□ -0.42
PRKCH-211ENST00000555082 TEFQ10587 303 aa12.42□□□□□ -0.42
PRKCH-211ENST00000555082 LMO7Q8WWI1 1683 aa12.42□□□□□ -0.42
PRKCH-211ENST00000555082 FAM208AQ9UK61 1670 aaKnown RBP12.42□□□□□ -0.42
PRKCH-211ENST00000555082 HSPA1LP34931 641 aa12.41□□□□□ -0.42
PRKCH-211ENST00000555082 MFAP1P55081 439 aaKnown RBP12.41□□□□□ -0.42
PRKCH-211ENST00000555082 CARD10Q9BWT7 1032 aa12.41□□□□□ -0.42
PRKCH-211ENST00000555082 MCM4P33991 863 aa12.41□□□□□ -0.42
PRKCH-211ENST00000555082 SLC39A6Q13433 755 aa12.41□□□□□ -0.42
PRKCH-211ENST00000555082 SPG7Q9UQ90 795 aa12.41□□□□□ -0.42
PRKCH-211ENST00000555082 CEMIPQ8WUJ3 1361 aa12.41□□□□□ -0.42
PRKCH-211ENST00000555082 TRIM27P14373 513 aa12.4□□□□□ -0.42
PRKCH-211ENST00000555082 IL2RBP14784 551 aa12.4□□□□□ -0.42
PRKCH-211ENST00000555082 C8orf37Q96NL8 207 aa12.4□□□□□ -0.42
PRKCH-211ENST00000555082 BTBD11A6QL63 1104 aa12.4□□□□□ -0.42
PRKCH-211ENST00000555082 CT47B1P0C2W7 299 aaPredicted RBP12.4□□□□□ -0.42
PRKCH-211ENST00000555082 MRPL50Q8N5N7 158 aaKnown RBP12.4□□□□□ -0.42
PRKCH-211ENST00000555082 IFNL2Q8IZJ0 200 aa12.39□□□□□ -0.43
PRKCH-211ENST00000555082 NFATC2IPQ8NCF5 419 aa12.39□□□□□ -0.43
PRKCH-211ENST00000555082 ZCRB1Q8TBF4 217 aaKnown RBP12.39□□□□□ -0.43
PRKCH-211ENST00000555082 PRAMEF22A3QJZ6 481 aa12.39□□□□□ -0.43
PRKCH-211ENST00000555082 ZKSCAN2Q63HK3 967 aa12.39□□□□□ -0.43
PRKCH-211ENST00000555082 CCDC9Q9Y3X0 531 aaKnown RBP12.39□□□□□ -0.43
PRKCH-211ENST00000555082 KDM6AO15550 1401 aaPredicted RBP12.39□□□□□ -0.43
PRKCH-211ENST00000555082 TRAK2O60296 914 aa12.38□□□□□ -0.43
PRKCH-211ENST00000555082 EIF2S2P20042 333 aaKnown RBP12.38□□□□□ -0.43
PRKCH-211ENST00000555082 OVOS2A0A0G2JMS6 1433 aa12.37□□□□□ -0.43
PRKCH-211ENST00000555082 ALDH1L2Q3SY69 923 aa12.37□□□□□ -0.43
PRKCH-211ENST00000555082 ATF7IPQ6VMQ6 1270 aa12.37□□□□□ -0.43
PRKCH-211ENST00000555082 G2E3Q7L622 706 aa12.37□□□□□ -0.43
PRKCH-211ENST00000555082 FTSJ3Q8IY81 847 aaKnown RBP12.37□□□□□ -0.43
PRKCH-211ENST00000555082 ABCC6O95255 1503 aa12.37□□□□□ -0.43
PRKCH-211ENST00000555082 EIF4A1P60842 406 aaKnown RBP12.37□□□□□ -0.43
PRKCH-211ENST00000555082 DZIP1LQ8IYY4 767 aaKnown RBP12.37□□□□□ -0.43
PRKCH-211ENST00000555082 NGLY1Q96IV0 654 aa12.37□□□□□ -0.43
PRKCH-211ENST00000555082 ANXA1P04083 346 aa12.36□□□□□ -0.43
PRKCH-211ENST00000555082 SLC4A2P04920 1241 aa12.36□□□□□ -0.43
PRKCH-211ENST00000555082 TMEM57Q8N5G2 664 aa12.36□□□□□ -0.43
PRKCH-211ENST00000555082 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.36□□□□□ -0.43
PRKCH-211ENST00000555082 FSD2A1L4K1 749 aa12.36□□□□□ -0.43
PRKCH-211ENST00000555082 C22orf23Q9BZE7 217 aa12.36□□□□□ -0.43
PRKCH-211ENST00000555082 COL22A1Q8NFW1 1626 aaPredicted RBP12.35□□□□□ -0.43
PRKCH-211ENST00000555082 VSIG10Q8N0Z9 540 aa12.35□□□□□ -0.43
PRKCH-211ENST00000555082 RWDD1Q9H446 243 aaPredicted RBP12.35□□□□□ -0.43
PRKCH-211ENST00000555082 SLC52A2Q9HAB3 445 aa12.35□□□□□ -0.43
PRKCH-211ENST00000555082 JCADQ9P266 1359 aa12.35□□□□□ -0.43
PRKCH-211ENST00000555082 ITPRIPQ8IWB1 547 aa12.35□□□□□ -0.43
PRKCH-211ENST00000555082 VIRMAQ69YN4 1812 aaKnown RBP12.35□□□□□ -0.43
PRKCH-211ENST00000555082 DCAF5Q96JK2 942 aa12.34□□□□□ -0.43
PRKCH-211ENST00000555082 LRRC37A3O60309 1634 aa12.34□□□□□ -0.43
PRKCH-211ENST00000555082 CHMP5Q9NZZ3 219 aa12.34□□□□□ -0.43
PRKCH-211ENST00000555082 KIF16BQ96L93 1317 aa12.34□□□□□ -0.43
PRKCH-211ENST00000555082 PCDH11XQ9BZA7 1347 aa12.34□□□□□ -0.43
PRKCH-211ENST00000555082 PCDH11YQ9BZA8 1340 aa12.34□□□□□ -0.43
PRKCH-211ENST00000555082 F6X3S4 739 aa12.34□□□□□ -0.43
PRKCH-211ENST00000555082 CABP4P57796 275 aa12.34□□□□□ -0.43
PRKCH-211ENST00000555082 FOXD4L1Q9NU39 408 aa12.34□□□□□ -0.43
PRKCH-211ENST00000555082 HSP90AA1P07900 732 aaKnown RBP12.33□□□□□ -0.44
PRKCH-211ENST00000555082 HDGFL1Q5TGJ6 251 aa12.33□□□□□ -0.44
PRKCH-211ENST00000555082 A0A0G2JS52 829 aa12.32□□□□□ -0.44
PRKCH-211ENST00000555082 CLCN1P35523 988 aa12.32□□□□□ -0.44
PRKCH-211ENST00000555082 PIP4K2AP48426 406 aaPredicted RBP12.32□□□□□ -0.44
PRKCH-211ENST00000555082 MVPQ14764 893 aaKnown RBP12.32□□□□□ -0.44
PRKCH-211ENST00000555082 ZNF428Q96B54 188 aa12.32□□□□□ -0.44
PRKCH-211ENST00000555082 LRP6O75581 1613 aa12.32□□□□□ -0.44
PRKCH-211ENST00000555082 COL14A1Q05707 1796 aaKnown RBP12.32□□□□□ -0.44
PRKCH-211ENST00000555082 SPATA31A1Q5TZJ5 1347 aa12.32□□□□□ -0.44
PRKCH-211ENST00000555082 IPO8O15397 1037 aaKnown RBP12.32□□□□□ -0.44
PRKCH-211ENST00000555082 HSP90AA2PQ14568 343 aaPredicted RBP12.32□□□□□ -0.44
PRKCH-211ENST00000555082 ZNF790Q6PG37 636 aa12.32□□□□□ -0.44
PRKCH-211ENST00000555082 ZNF496Q96IT1 587 aaPredicted RBP12.32□□□□□ -0.44
PRKCH-211ENST00000555082 PHAXQ9H814 394 aaKnown RBP12.32□□□□□ -0.44
PRKCH-211ENST00000555082 ERBB4Q15303 1308 aa12.31□□□□□ -0.44
PRKCH-211ENST00000555082 FAM98CQ17RN3 349 aaKnown RBP12.31□□□□□ -0.44
PRKCH-211ENST00000555082 PKNOX2Q96KN3 472 aa12.31□□□□□ -0.44
PRKCH-211ENST00000555082 GRPEL1Q9HAV7 217 aa12.31□□□□□ -0.44
PRKCH-211ENST00000555082 GIGYF1O75420 1035 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms