RNA–Protein interactions for RNA: ENST00000555049.5

CCNK-204, Transcript of cyclin K, humanhuman

TSL 1 (best) BASIC

Gene CCNK, Length 1,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-204ENST00000555049 PRDM4Q9UKN5 801 aa13.05□□□□□ -0.32
CCNK-204ENST00000555049 NCAPD2Q15021 1401 aa13.04□□□□□ -0.32
CCNK-204ENST00000555049 GOLGA6L3A6NEY3 463 aa13.04□□□□□ -0.32
CCNK-204ENST00000555049 CENPQQ7L2Z9 268 aaPredicted RBP13.04□□□□□ -0.32
CCNK-204ENST00000555049 MARCH10Q8NA82 808 aaPredicted RBP13.04□□□□□ -0.32
CCNK-204ENST00000555049 PARD3Q8TEW0 1356 aa13.04□□□□□ -0.32
CCNK-204ENST00000555049 PPP2R1AP30153 589 aa13.03□□□□□ -0.32
CCNK-204ENST00000555049 IL13P35225 146 aa13.03□□□□□ -0.32
CCNK-204ENST00000555049 TNS2Q63HR2 1409 aa13.03□□□□□ -0.32
CCNK-204ENST00000555049 EXOC5O00471 708 aa13.02□□□□□ -0.32
CCNK-204ENST00000555049 BECN1Q14457 450 aa13.02□□□□□ -0.32
CCNK-204ENST00000555049 KDM2BQ8NHM5 1336 aa13.02□□□□□ -0.32
CCNK-204ENST00000555049 COL3A1P02461 1466 aaPredicted RBP13.02□□□□□ -0.32
CCNK-204ENST00000555049 IGSF1Q8N6C5 1336 aa13.02□□□□□ -0.33
CCNK-204ENST00000555049 OVOS2A0A0G2JMS6 1433 aa13.02□□□□□ -0.33
CCNK-204ENST00000555049 MRE11P49959 708 aa13.01□□□□□ -0.33
CCNK-204ENST00000555049 NCLP19338 710 aaKnown RBP13□□□□□ -0.33
CCNK-204ENST00000555049 MTERF4Q7Z6M4 381 aaKnown RBP13□□□□□ -0.33
CCNK-204ENST00000555049 AEBP1Q8IUX7 1158 aa13□□□□□ -0.33
CCNK-204ENST00000555049 RAPGEF4Q8WZA2 1011 aa13□□□□□ -0.33
CCNK-204ENST00000555049 C8orf34Q49A92 452 aa12.99□□□□□ -0.33
CCNK-204ENST00000555049 FAM196AQ6ZSG2 479 aa12.99□□□□□ -0.33
CCNK-204ENST00000555049 RGPD1P0DJD0 1748 aa12.99□□□□□ -0.33
CCNK-204ENST00000555049 DIAPH1O60610 1272 aaKnown RBP12.99□□□□□ -0.33
CCNK-204ENST00000555049 XRCC6P12956 609 aaKnown RBP eCLIP12.99□□□□□ -0.33
CCNK-204ENST00000555049 TATP17735 454 aaPredicted RBP12.99□□□□□ -0.33
CCNK-204ENST00000555049 SMAP1Q8IYB5 467 aaPredicted RBP12.99□□□□□ -0.33
CCNK-204ENST00000555049 ZCRB1Q8TBF4 217 aaKnown RBP12.99□□□□□ -0.33
CCNK-204ENST00000555049 DDX54Q8TDD1 881 aaKnown RBP12.99□□□□□ -0.33
CCNK-204ENST00000555049 ESPNB1AK53 854 aa12.98□□□□□ -0.33
CCNK-204ENST00000555049 TRIM37O94972 964 aa12.98□□□□□ -0.33
CCNK-204ENST00000555049 KCNA4P22459 653 aa12.98□□□□□ -0.33
CCNK-204ENST00000555049 PDE4CQ08493 712 aa12.98□□□□□ -0.33
CCNK-204ENST00000555049 PTF1AQ7RTS3 328 aa12.98□□□□□ -0.33
CCNK-204ENST00000555049 SHANK3Q9BYB0 1731 aa12.97□□□□□ -0.33
CCNK-204ENST00000555049 SULT6B1Q6IMI4 303 aa12.97□□□□□ -0.33
CCNK-204ENST00000555049 BCL9O00512 1426 aa12.97□□□□□ -0.33
CCNK-204ENST00000555049 KDRP35968 1356 aa12.97□□□□□ -0.33
CCNK-204ENST00000555049 SLC4A3P48751 1232 aa12.96□□□□□ -0.33
CCNK-204ENST00000555049 RALBP1Q15311 655 aa12.96□□□□□ -0.33
CCNK-204ENST00000555049 ZBTB12Q9Y330 459 aaPredicted RBP12.96□□□□□ -0.33
CCNK-204ENST00000555049 CYP27B1O15528 508 aa12.95□□□□□ -0.34
CCNK-204ENST00000555049 MYCNP04198 464 aaPredicted RBP12.95□□□□□ -0.34
CCNK-204ENST00000555049 HMOX1P09601 288 aa12.95□□□□□ -0.34
CCNK-204ENST00000555049 DEFB132Q7Z7B7 95 aa12.95□□□□□ -0.34
CCNK-204ENST00000555049 CCDC125Q86Z20 511 aa12.95□□□□□ -0.34
CCNK-204ENST00000555049 KCNQ2O43526 872 aa12.95□□□□□ -0.34
CCNK-204ENST00000555049 ACSBG1Q96GR2 724 aa12.95□□□□□ -0.34
CCNK-204ENST00000555049 CFAP53Q96M91 514 aa12.95□□□□□ -0.34
CCNK-204ENST00000555049 MYBBP1AQ9BQG0 1328 aaKnown RBP12.94□□□□□ -0.34
CCNK-204ENST00000555049 U2SURPO15042 1029 aaKnown RBP12.94□□□□□ -0.34
CCNK-204ENST00000555049 PKD1L3Q7Z443 1732 aa12.94□□□□□ -0.34
CCNK-204ENST00000555049 TNS1Q9HBL0 1735 aaKnown RBP12.94□□□□□ -0.34
CCNK-204ENST00000555049 PCDH11XQ9BZA7 1347 aa12.93□□□□□ -0.34
CCNK-204ENST00000555049 PCDH11YQ9BZA8 1340 aa12.93□□□□□ -0.34
CCNK-204ENST00000555049 UTP14CQ5TAP6 766 aaKnown RBP12.93□□□□□ -0.34
CCNK-204ENST00000555049 MYH16Q9H6N6 1097 aa12.92□□□□□ -0.34
CCNK-204ENST00000555049 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.92□□□□□ -0.342e-7■■□□□ 12.4
CCNK-204ENST00000555049 SPG7Q9UQ90 795 aa12.92□□□□□ -0.34
CCNK-204ENST00000555049 EN1Q05925 392 aaPredicted RBP12.91□□□□□ -0.34
CCNK-204ENST00000555049 SF3B2Q13435 895 aaKnown RBP12.91□□□□□ -0.34
CCNK-204ENST00000555049 BCL11BQ9C0K0 894 aaPredicted RBP12.91□□□□□ -0.34
CCNK-204ENST00000555049 SBF2Q86WG5 1849 aa12.91□□□□□ -0.34
CCNK-204ENST00000555049 APBA3O96018 575 aa12.91□□□□□ -0.34
CCNK-204ENST00000555049 PHKG2P15735 406 aa12.91□□□□□ -0.34
CCNK-204ENST00000555049 ANTXR1Q9H6X2 564 aa12.91□□□□□ -0.34
CCNK-204ENST00000555049 PLEKHG2Q9H7P9 1386 aa12.9□□□□□ -0.34
CCNK-204ENST00000555049 A0A0U1RQG5 324 aaPredicted RBP12.9□□□□□ -0.34
CCNK-204ENST00000555049 PRIM1P49642 420 aaKnown RBP12.9□□□□□ -0.34
CCNK-204ENST00000555049 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.9□□□□□ -0.34
CCNK-204ENST00000555049 CRBNQ96SW2 442 aa12.9□□□□□ -0.34
CCNK-204ENST00000555049 NHSQ6T4R5 1651 aa12.89□□□□□ -0.35
CCNK-204ENST00000555049 U2AF1L5P0DN76 240 aaPredicted RBP12.89□□□□□ -0.35
CCNK-204ENST00000555049 BAG6P46379 1132 aa12.89□□□□□ -0.35
CCNK-204ENST00000555049 U2AF1Q01081 240 aaKnown RBP eCLIP12.89□□□□□ -0.35
CCNK-204ENST00000555049 NKX1-1Q15270 411 aaPredicted RBP12.89□□□□□ -0.35
CCNK-204ENST00000555049 EZH2Q15910 746 aaKnown RBP12.89□□□□□ -0.35
CCNK-204ENST00000555049 PLEKHO1Q53GL0 409 aaPredicted RBP12.89□□□□□ -0.35
CCNK-204ENST00000555049 PIP4P2Q8N4L2 257 aa12.89□□□□□ -0.35
CCNK-204ENST00000555049 TRIM44Q96DX7 344 aaPredicted RBP12.89□□□□□ -0.35
CCNK-204ENST00000555049 CAMKK2Q96RR4 588 aa12.89□□□□□ -0.35
CCNK-204ENST00000555049 DOT1LQ8TEK3 1739 aa12.89□□□□□ -0.35
CCNK-204ENST00000555049 PTMSP20962 102 aa12.88□□□□□ -0.35
CCNK-204ENST00000555049 MTHFSDQ2M296 383 aaKnown RBP12.88□□□□□ -0.35
CCNK-204ENST00000555049 AMOTQ4VCS5 1084 aa12.88□□□□□ -0.35
CCNK-204ENST00000555049 ZNF530Q6P9A1 599 aaPredicted RBP12.88□□□□□ -0.35
CCNK-204ENST00000555049 IFNL2Q8IZJ0 200 aa12.88□□□□□ -0.35
CCNK-204ENST00000555049 SYTL4Q96C24 671 aaPredicted RBP12.88□□□□□ -0.35
CCNK-204ENST00000555049 HAX1O00165 279 aa12.88□□□□□ -0.35
CCNK-204ENST00000555049 PRKAR2BP31323 418 aa12.88□□□□□ -0.35
CCNK-204ENST00000555049 PHACTR3Q96KR7 559 aa12.88□□□□□ -0.35
CCNK-204ENST00000555049 TOGARAM1Q9Y4F4 1720 aa12.87□□□□□ -0.35
CCNK-204ENST00000555049 OFD1O75665 1012 aa12.87□□□□□ -0.35
CCNK-204ENST00000555049 MCM4P33991 863 aa12.87□□□□□ -0.35
CCNK-204ENST00000555049 GRPEL1Q9HAV7 217 aa12.87□□□□□ -0.35
CCNK-204ENST00000555049 KDM6AO15550 1401 aaPredicted RBP12.86□□□□□ -0.35
CCNK-204ENST00000555049 DDX11L8A8MPP1 907 aa12.86□□□□□ -0.35
CCNK-204ENST00000555049 PROM2Q8N271 834 aa12.86□□□□□ -0.35
CCNK-204ENST00000555049 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.86□□□□□ -0.35
CCNK-204ENST00000555049 MAPK8IP3Q9UPT6 1336 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms