RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 SLC4A10Q6U841 1118 aa26.41■■□□□ 1.82
ARHGEF40-204ENST00000555038 SNX21Q969T3 373 aa26.41■■□□□ 1.82
ARHGEF40-204ENST00000555038 FKBP5Q13451 457 aaPredicted RBP26.41■■□□□ 1.82
ARHGEF40-204ENST00000555038 TTC22Q5TAA0 569 aa26.41■■□□□ 1.82
ARHGEF40-204ENST00000555038 TBC1D9Q6ZT07 1266 aa26.41■■□□□ 1.82
ARHGEF40-204ENST00000555038 DCCP43146 1447 aa26.4■■□□□ 1.82
ARHGEF40-204ENST00000555038 F6X3S4 739 aa26.39■■□□□ 1.82
ARHGEF40-204ENST00000555038 KRT28Q7Z3Y7 464 aa26.38■■□□□ 1.81
ARHGEF40-204ENST00000555038 HSCBQ8IWL3 235 aa26.38■■□□□ 1.81
ARHGEF40-204ENST00000555038 RGPD2P0DJD1 1756 aa26.38■■□□□ 1.81
ARHGEF40-204ENST00000555038 HDGFL1Q5TGJ6 251 aa26.38■■□□□ 1.81
ARHGEF40-204ENST00000555038 GSPT1P15170 499 aaKnown RBP26.37■■□□□ 1.81
ARHGEF40-204ENST00000555038 ALS2Q96Q42 1657 aa26.37■■□□□ 1.81
ARHGEF40-204ENST00000555038 EIF4A1P60842 406 aaKnown RBP26.36■■□□□ 1.81
ARHGEF40-204ENST00000555038 ZNF530Q6P9A1 599 aaPredicted RBP26.35■■□□□ 1.81
ARHGEF40-204ENST00000555038 FRAT2O75474 233 aaPredicted RBP26.34■■□□□ 1.81
ARHGEF40-204ENST00000555038 ANKRD24Q8TF21 1146 aa26.34■■□□□ 1.81
ARHGEF40-204ENST00000555038 SLKQ9H2G2 1235 aaPredicted RBP26.34■■□□□ 1.81
ARHGEF40-204ENST00000555038 OSBPL3Q9H4L5 887 aa26.34■■□□□ 1.81
ARHGEF40-204ENST00000555038 TEFQ10587 303 aa26.33■■□□□ 1.81
ARHGEF40-204ENST00000555038 ZBTB7CA1YPR0 619 aa26.33■■□□□ 1.8
ARHGEF40-204ENST00000555038 C1orf141Q5JVX7 400 aa26.33■■□□□ 1.8
ARHGEF40-204ENST00000555038 LRRC59Q96AG4 307 aaKnown RBP26.33■■□□□ 1.8
ARHGEF40-204ENST00000555038 PLEKHG2Q9H7P9 1386 aa26.32■■□□□ 1.8
ARHGEF40-204ENST00000555038 ATP8B2P98198 1209 aa26.32■■□□□ 1.8
ARHGEF40-204ENST00000555038 CASC1Q6TDU7 716 aa26.31■■□□□ 1.8
ARHGEF40-204ENST00000555038 LGR6Q9HBX8 967 aa26.31■■□□□ 1.8
ARHGEF40-204ENST00000555038 ADAMTS7Q9UKP4 1686 aa26.3■■□□□ 1.8
ARHGEF40-204ENST00000555038 ABCC6O95255 1503 aa26.3■■□□□ 1.8
ARHGEF40-204ENST00000555038 XPCQ01831 940 aaPredicted RBP26.3■■□□□ 1.8
ARHGEF40-204ENST00000555038 GSE1Q14687 1217 aa26.3■■□□□ 1.8
ARHGEF40-204ENST00000555038 CHMP5Q9NZZ3 219 aa26.3■■□□□ 1.8
ARHGEF40-204ENST00000555038 RNMTO43148 476 aaKnown RBP26.29■■□□□ 1.8
ARHGEF40-204ENST00000555038 C16orf71Q8IYS4 520 aaPredicted RBP26.29■■□□□ 1.8
ARHGEF40-204ENST00000555038 BTBD11A6QL63 1104 aa26.28■■□□□ 1.8
ARHGEF40-204ENST00000555038 ATF3P18847 181 aa26.28■■□□□ 1.8
ARHGEF40-204ENST00000555038 LMOD2Q6P5Q4 547 aa26.28■■□□□ 1.8
ARHGEF40-204ENST00000555038 NECTIN2Q92692 538 aa26.28■■□□□ 1.8
ARHGEF40-204ENST00000555038 KIF2CQ99661 725 aa26.27■■□□□ 1.8
ARHGEF40-204ENST00000555038 PXDNQ92626 1479 aa26.26■■□□□ 1.8
ARHGEF40-204ENST00000555038 ERBB3P21860 1342 aa26.26■■□□□ 1.79
ARHGEF40-204ENST00000555038 TMEM94Q12767 1356 aa26.26■■□□□ 1.79
ARHGEF40-204ENST00000555038 IBTKQ9P2D0 1353 aaPredicted RBP26.26■■□□□ 1.79
ARHGEF40-204ENST00000555038 SMARCA5O60264 1052 aaPredicted RBP26.25■■□□□ 1.79
ARHGEF40-204ENST00000555038 UBTFL1P0CB47 393 aaPredicted RBP26.25■■□□□ 1.79
ARHGEF40-204ENST00000555038 SRCIN1Q9C0H9 1055 aa26.25■■□□□ 1.79
ARHGEF40-204ENST00000555038 USP44Q9H0E7 712 aa26.25■■□□□ 1.79
ARHGEF40-204ENST00000555038 SIPA1L3O60292 1781 aaPredicted RBP26.25■■□□□ 1.79
ARHGEF40-204ENST00000555038 SDSP20132 328 aa26.25■■□□□ 1.79
ARHGEF40-204ENST00000555038 LRRCC1Q9C099 1032 aa26.25■■□□□ 1.79
ARHGEF40-204ENST00000555038 HEG1Q9ULI3 1381 aa26.24■■□□□ 1.79
ARHGEF40-204ENST00000555038 OTUD7AQ8TE49 926 aaPredicted RBP26.24■■□□□ 1.79
ARHGEF40-204ENST00000555038 MPRIPQ6WCQ1 1025 aa26.23■■□□□ 1.79
ARHGEF40-204ENST00000555038 PHAXQ9H814 394 aaKnown RBP26.23■■□□□ 1.79
ARHGEF40-204ENST00000555038 PDE1AP54750 535 aa26.23■■□□□ 1.79
ARHGEF40-204ENST00000555038 CIZ1Q9ULV3 898 aaPredicted RBP26.23■■□□□ 1.79
ARHGEF40-204ENST00000555038 AXIN2Q9Y2T1 843 aa26.23■■□□□ 1.79
ARHGEF40-204ENST00000555038 SALL3Q9BXA9 1300 aa26.22■■□□□ 1.79
ARHGEF40-204ENST00000555038 DBF4Q9UBU7 674 aaPredicted RBP26.22■■□□□ 1.79
ARHGEF40-204ENST00000555038 LRRFIP2Q9Y608 721 aaKnown RBP26.22■■□□□ 1.79
ARHGEF40-204ENST00000555038 CADPS2Q86UW7 1296 aa26.21■■□□□ 1.79
ARHGEF40-204ENST00000555038 SSH3Q8TE77 659 aa26.21■■□□□ 1.79
ARHGEF40-204ENST00000555038 CHPF2Q9P2E5 772 aa26.21■■□□□ 1.79
ARHGEF40-204ENST00000555038 NPHP3Q7Z494 1330 aa26.21■■□□□ 1.79
ARHGEF40-204ENST00000555038 APBB1O00213 710 aa26.2■■□□□ 1.79
ARHGEF40-204ENST00000555038 EIF2S2P20042 333 aaKnown RBP26.2■■□□□ 1.79
ARHGEF40-204ENST00000555038 DNAAF4Q8WXU2 420 aa26.2■■□□□ 1.79
ARHGEF40-204ENST00000555038 AOX1Q06278 1338 aa26.2■■□□□ 1.79
ARHGEF40-204ENST00000555038 STRCP1A6NGW2 1772 aa26.2■■□□□ 1.78
ARHGEF40-204ENST00000555038 PNMA6EA0A0J9YXQ4 647 aa26.2■■□□□ 1.78
ARHGEF40-204ENST00000555038 REC8O95072 547 aa26.2■■□□□ 1.78
ARHGEF40-204ENST00000555038 DDIT3P35638 169 aa26.2■■□□□ 1.78
ARHGEF40-204ENST00000555038 RABEP1Q15276 862 aa26.2■■□□□ 1.78
ARHGEF40-204ENST00000555038 RGPD5Q99666 1765 aa26.2■■□□□ 1.78
ARHGEF40-204ENST00000555038 RAB11FIP3O75154 756 aa26.19■■□□□ 1.78
ARHGEF40-204ENST00000555038 USP26Q9BXU7 913 aa26.19■■□□□ 1.78
ARHGEF40-204ENST00000555038 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.19■■□□□ 1.782e-6■■■■□ 19.7
ARHGEF40-204ENST00000555038 EXOC6BQ9Y2D4 811 aa26.19■■□□□ 1.78
ARHGEF40-204ENST00000555038 HSP90AB1P08238 724 aaKnown RBP26.18■■□□□ 1.78
ARHGEF40-204ENST00000555038 STAP2Q9UGK3 403 aa26.18■■□□□ 1.78
ARHGEF40-204ENST00000555038 TNS3Q68CZ2 1445 aa26.18■■□□□ 1.78
ARHGEF40-204ENST00000555038 KCNQ3O43525 872 aa26.18■■□□□ 1.78
ARHGEF40-204ENST00000555038 BEND3Q5T5X7 828 aa26.18■■□□□ 1.78
ARHGEF40-204ENST00000555038 COL18A1P39060 1754 aa26.18■■□□□ 1.78
ARHGEF40-204ENST00000555038 K7ELQ4 463 aaPredicted RBP26.17■■□□□ 1.78
ARHGEF40-204ENST00000555038 GIGYF1O75420 1035 aaPredicted RBP26.17■■□□□ 1.78
ARHGEF40-204ENST00000555038 POLA2Q14181 598 aa26.17■■□□□ 1.78
ARHGEF40-204ENST00000555038 HDAC5Q9UQL6 1122 aa26.17■■□□□ 1.78
ARHGEF40-204ENST00000555038 TUBGCP6Q96RT7 1819 aa26.17■■□□□ 1.78
ARHGEF40-204ENST00000555038 RAPGEF4Q8WZA2 1011 aa26.16■■□□□ 1.78
ARHGEF40-204ENST00000555038 MX1P20591 662 aa26.15■■□□□ 1.78
ARHGEF40-204ENST00000555038 CRYBG1Q9Y4K1 1723 aa26.15■■□□□ 1.78
ARHGEF40-204ENST00000555038 PI4KAP2A4QPH2 592 aa26.15■■□□□ 1.78
ARHGEF40-204ENST00000555038 ERC2O15083 957 aa26.15■■□□□ 1.78
ARHGEF40-204ENST00000555038 PI4KAP1Q8N8J0 262 aa26.15■■□□□ 1.78
ARHGEF40-204ENST00000555038 ALDH1L1O75891 902 aa26.14■■□□□ 1.78
ARHGEF40-204ENST00000555038 ADCY9O60503 1353 aa26.14■■□□□ 1.77
ARHGEF40-204ENST00000555038 ZC3H6P61129 1189 aaKnown RBP26.13■■□□□ 1.77
ARHGEF40-204ENST00000555038 SPRYD3Q8NCJ5 442 aa26.13■■□□□ 1.77
ARHGEF40-204ENST00000555038 HYPKQ9NX55 129 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms