RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 ZNF594Q96JF6 807 aaPredicted RBP7.93□□□□□ -1.14
SCFD1-214ENST00000554819 SLC4A9Q96Q91 983 aa7.93□□□□□ -1.14
SCFD1-214ENST00000554819 ZSCAN10Q96SZ4 725 aaPredicted RBP7.93□□□□□ -1.14
SCFD1-214ENST00000554819 STAU1O95793 577 aaKnown RBP7.92□□□□□ -1.14
SCFD1-214ENST00000554819 SMTNP53814 917 aa7.92□□□□□ -1.14
SCFD1-214ENST00000554819 PTK7Q13308 1070 aa7.92□□□□□ -1.14
SCFD1-214ENST00000554819 TLR1Q15399 786 aa7.92□□□□□ -1.14
SCFD1-214ENST00000554819 PRICKLE2Q7Z3G6 844 aa7.92□□□□□ -1.14
SCFD1-214ENST00000554819 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.92□□□□□ -1.14
SCFD1-214ENST00000554819 PBXIP1Q96AQ6 731 aa7.92□□□□□ -1.14
SCFD1-214ENST00000554819 SERTAD1Q9UHV2 236 aa7.92□□□□□ -1.14
SCFD1-214ENST00000554819 KIAA1024Q9UPX6 916 aa7.92□□□□□ -1.14
SCFD1-214ENST00000554819 SOBPA7XYQ1 873 aa7.91□□□□□ -1.14
SCFD1-214ENST00000554819 USP17L15C9J2P7 530 aa7.91□□□□□ -1.14
SCFD1-214ENST00000554819 USP17L10C9JJH3 530 aa7.91□□□□□ -1.14
SCFD1-214ENST00000554819 USP17L13C9JLJ4 530 aa7.91□□□□□ -1.14
SCFD1-214ENST00000554819 USP17L12C9JPN9 530 aa7.91□□□□□ -1.14
SCFD1-214ENST00000554819 USP17L11C9JVI0 530 aa7.91□□□□□ -1.14
SCFD1-214ENST00000554819 USP17L21D6R901 530 aa7.91□□□□□ -1.14
SCFD1-214ENST00000554819 USP17L18D6R9N7 530 aa7.91□□□□□ -1.14
SCFD1-214ENST00000554819 USP17L22D6RA61 530 aa7.91□□□□□ -1.14
SCFD1-214ENST00000554819 USP17L17D6RBQ6 530 aa7.91□□□□□ -1.14
SCFD1-214ENST00000554819 USP17L19D6RCP7 530 aa7.91□□□□□ -1.14
SCFD1-214ENST00000554819 USP17L20D6RJB6 530 aa7.91□□□□□ -1.14
SCFD1-214ENST00000554819 M0R2N6 131 aa7.91□□□□□ -1.14
SCFD1-214ENST00000554819 SEC13P55735 322 aa7.91□□□□□ -1.14
SCFD1-214ENST00000554819 USP17L24Q0WX57 530 aa7.91□□□□□ -1.14
SCFD1-214ENST00000554819 CRTC2Q53ET0 693 aaPredicted RBP7.91□□□□□ -1.14
SCFD1-214ENST00000554819 CDCA8Q53HL2 280 aa7.91□□□□□ -1.14
SCFD1-214ENST00000554819 WDR44Q5JSH3 913 aa7.91□□□□□ -1.14
SCFD1-214ENST00000554819 TMEM214Q6NUQ4 689 aaKnown RBP7.91□□□□□ -1.14
SCFD1-214ENST00000554819 ZNF358Q9NW07 568 aa7.91□□□□□ -1.14
SCFD1-214ENST00000554819 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.9□□□□□ -1.14
SCFD1-214ENST00000554819 A6NJY4 79 aa7.9□□□□□ -1.14
SCFD1-214ENST00000554819 SPATA31C2B4DYI2 1134 aa7.9□□□□□ -1.14
SCFD1-214ENST00000554819 PPP1R15AO75807 674 aaPredicted RBP7.9□□□□□ -1.14
SCFD1-214ENST00000554819 SRPK2P78362 688 aaKnown RBP7.9□□□□□ -1.14
SCFD1-214ENST00000554819 GNASQ5JWF2 1037 aa7.9□□□□□ -1.14
SCFD1-214ENST00000554819 ANKMY2Q8IV38 441 aa7.9□□□□□ -1.14
SCFD1-214ENST00000554819 FHDC1Q9C0D6 1143 aaPredicted RBP7.9□□□□□ -1.14
SCFD1-214ENST00000554819 ACIN1Q9UKV3 1341 aaKnown RBP7.89□□□□□ -1.15
SCFD1-214ENST00000554819 CDK2AP1O14519 115 aa7.89□□□□□ -1.15
SCFD1-214ENST00000554819 DPYDQ12882 1025 aa7.89□□□□□ -1.15
SCFD1-214ENST00000554819 MTFR1Q15390 333 aa7.89□□□□□ -1.15
SCFD1-214ENST00000554819 TAS1R3Q7RTX0 852 aa7.89□□□□□ -1.15
SCFD1-214ENST00000554819 PPARGC1BQ86YN6 1023 aaKnown RBP7.89□□□□□ -1.15
SCFD1-214ENST00000554819 NBPF15Q8N660 670 aa7.89□□□□□ -1.15
SCFD1-214ENST00000554819 FAM200AQ8TCP9 573 aa7.89□□□□□ -1.15
SCFD1-214ENST00000554819 RHBDD1Q8TEB9 315 aa7.89□□□□□ -1.15
SCFD1-214ENST00000554819 DKK1O94907 266 aa7.88□□□□□ -1.15
SCFD1-214ENST00000554819 ATG7O95352 703 aa7.88□□□□□ -1.15
SCFD1-214ENST00000554819 PTSQ03393 145 aa7.88□□□□□ -1.15
SCFD1-214ENST00000554819 POU4F2Q12837 409 aa7.88□□□□□ -1.15
SCFD1-214ENST00000554819 ELOAQ14241 798 aaKnown RBP7.88□□□□□ -1.15
SCFD1-214ENST00000554819 ARID3AQ99856 593 aa7.88□□□□□ -1.15
SCFD1-214ENST00000554819 SFI1A8K8P3 1242 aa7.87□□□□□ -1.15
SCFD1-214ENST00000554819 NBPF10Q6P3W6 841 aaKnown RBP7.87□□□□□ -1.15
SCFD1-214ENST00000554819 NPAS3Q8IXF0 933 aa7.87□□□□□ -1.15
SCFD1-214ENST00000554819 NXF1Q9UBU9 619 aaKnown RBP7.87□□□□□ -1.15
SCFD1-214ENST00000554819 NOVA2Q9UNW9 492 aaKnown RBP7.87□□□□□ -1.15
SCFD1-214ENST00000554819 TNS4Q8IZW8 715 aa7.86□□□□□ -1.15
SCFD1-214ENST00000554819 ARXQ96QS3 562 aa7.86□□□□□ -1.15
SCFD1-214ENST00000554819 HINFPQ9BQA5 517 aa7.86□□□□□ -1.15
SCFD1-214ENST00000554819 NIFKQ9BYG3 293 aaKnown RBP7.86□□□□□ -1.15
SCFD1-214ENST00000554819 SCHIP1Q9P0W5 487 aaPredicted RBP7.86□□□□□ -1.15
SCFD1-214ENST00000554819 SLC35F4A4IF30 521 aa7.85□□□□□ -1.15
SCFD1-214ENST00000554819 RHOQP17081 205 aa7.85□□□□□ -1.15
SCFD1-214ENST00000554819 CCDC155Q8N6L0 562 aa7.85□□□□□ -1.15
SCFD1-214ENST00000554819 TSEN2Q8NCE0 465 aaKnown RBP7.85□□□□□ -1.15
SCFD1-214ENST00000554819 TIMMDC1Q9NPL8 285 aa7.85□□□□□ -1.15
SCFD1-214ENST00000554819 EPHA4P54764 986 aa7.84□□□□□ -1.15
SCFD1-214ENST00000554819 FOXK2Q01167 660 aa7.84□□□□□ -1.15
SCFD1-214ENST00000554819 C4orf17Q53FE4 359 aa7.84□□□□□ -1.15
SCFD1-214ENST00000554819 GAS2L2Q8NHY3 880 aa7.84□□□□□ -1.15
SCFD1-214ENST00000554819 CABP1Q9NZU7 370 aa7.84□□□□□ -1.15
SCFD1-214ENST00000554819 IQSEC3Q9UPP2 1182 aaPredicted RBP7.84□□□□□ -1.15
SCFD1-214ENST00000554819 CHMP3Q9Y3E7 222 aa7.84□□□□□ -1.15
SCFD1-214ENST00000554819 DYRK1BQ9Y463 629 aa7.84□□□□□ -1.15
SCFD1-214ENST00000554819 TERTO14746 1132 aaKnown RBP7.83□□□□□ -1.16
SCFD1-214ENST00000554819 PHKA2P46019 1235 aa7.83□□□□□ -1.16
SCFD1-214ENST00000554819 SLC9A9Q8IVB4 645 aa7.83□□□□□ -1.16
SCFD1-214ENST00000554819 SLC16A10Q8TF71 515 aa7.83□□□□□ -1.16
SCFD1-214ENST00000554819 SENP3-EIF4A1A0A087X0R7 540 aa7.82□□□□□ -1.16
SCFD1-214ENST00000554819 A0A1B0GTH6 734 aa7.82□□□□□ -1.16
SCFD1-214ENST00000554819 PPFIA3O75145 1194 aa7.82□□□□□ -1.16
SCFD1-214ENST00000554819 SWI5Q1ZZU3 235 aa7.82□□□□□ -1.16
SCFD1-214ENST00000554819 PLA2G4AP47712 749 aa7.81□□□□□ -1.16
SCFD1-214ENST00000554819 PSMA6P60900 246 aaKnown RBP7.81□□□□□ -1.16
SCFD1-214ENST00000554819 TEAD4Q15561 434 aa7.81□□□□□ -1.16
SCFD1-214ENST00000554819 AIDAQ96BJ3 306 aa7.81□□□□□ -1.16
SCFD1-214ENST00000554819 ZNF775Q96BV0 537 aaPredicted RBP7.81□□□□□ -1.16
SCFD1-214ENST00000554819 GAS2L1Q99501 681 aaPredicted RBP7.81□□□□□ -1.16
SCFD1-214ENST00000554819 TSPAN10Q9H1Z9 355 aaPredicted RBP7.81□□□□□ -1.16
SCFD1-214ENST00000554819 ZMIZ1Q9ULJ6 1067 aa7.81□□□□□ -1.16
SCFD1-214ENST00000554819 ATAD2Q6PL18 1390 aa7.81□□□□□ -1.16
SCFD1-214ENST00000554819 H7C1W4 665 aa7.8□□□□□ -1.16
SCFD1-214ENST00000554819 F11P03951 625 aa7.8□□□□□ -1.16
SCFD1-214ENST00000554819 ITGA6P23229 1130 aa7.8□□□□□ -1.16
SCFD1-214ENST00000554819 NOS2P35228 1153 aa7.8□□□□□ -1.16
SCFD1-214ENST00000554819 NBPF1Q3BBV0 1214 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms