RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-208ENST00000554698 RRP7AQ9Y3A4 280 aaKnown RBP28.26■■■□□ 2.12
SDR39U1-208ENST00000554698 APAF1O14727 1248 aa28.25■■■□□ 2.11
SDR39U1-208ENST00000554698 DCTN1Q14203 1278 aa28.25■■■□□ 2.11
SDR39U1-208ENST00000554698 PROM2Q8N271 834 aa28.25■■■□□ 2.11
SDR39U1-208ENST00000554698 SMARCC1Q92922 1105 aaPredicted RBP28.25■■■□□ 2.11
SDR39U1-208ENST00000554698 ASAP1Q9ULH1 1129 aa28.25■■■□□ 2.11
SDR39U1-208ENST00000554698 PALLDQ8WX93 1383 aa28.25■■■□□ 2.11
SDR39U1-208ENST00000554698 TEFQ10587 303 aa28.24■■■□□ 2.11
SDR39U1-208ENST00000554698 ATG3Q9NT62 314 aa28.24■■■□□ 2.11
SDR39U1-208ENST00000554698 LMOD3Q0VAK6 560 aa28.24■■■□□ 2.11
SDR39U1-208ENST00000554698 TXNRD1Q16881 649 aa28.23■■■□□ 2.11
SDR39U1-208ENST00000554698 NEUROD2Q15784 382 aa28.22■■■□□ 2.11
SDR39U1-208ENST00000554698 DLG5Q8TDM6 1919 aa28.21■■■□□ 2.11
SDR39U1-208ENST00000554698 TRIM35Q9UPQ4 493 aa28.21■■■□□ 2.11
SDR39U1-208ENST00000554698 THUMPD2Q9BTF0 503 aaKnown RBP28.2■■■□□ 2.1
SDR39U1-208ENST00000554698 VIRMAQ69YN4 1812 aaKnown RBP28.19■■■□□ 2.1
SDR39U1-208ENST00000554698 RREB1Q92766 1687 aa28.19■■■□□ 2.1
SDR39U1-208ENST00000554698 SLC27A3Q5K4L6 730 aa28.19■■■□□ 2.1
SDR39U1-208ENST00000554698 LY75O60449 1722 aa28.18■■■□□ 2.1
SDR39U1-208ENST00000554698 SIPA1L3O60292 1781 aaPredicted RBP28.17■■■□□ 2.1
SDR39U1-208ENST00000554698 LRRC4BQ9NT99 713 aa28.17■■■□□ 2.1
SDR39U1-208ENST00000554698 PAPPAQ13219 1627 aa28.16■■■□□ 2.1
SDR39U1-208ENST00000554698 LOC102724428A0A0B4J2F2 783 aa28.15■■■□□ 2.1
SDR39U1-208ENST00000554698 SIK1P57059 783 aa28.15■■■□□ 2.1
SDR39U1-208ENST00000554698 TAF7Q15545 349 aaPredicted RBP28.15■■■□□ 2.1
SDR39U1-208ENST00000554698 NCBP3Q53F19 620 aaKnown RBP28.15■■■□□ 2.1
SDR39U1-208ENST00000554698 CCNL1Q9UK58 526 aaPredicted RBP28.15■■■□□ 2.1
SDR39U1-208ENST00000554698 SLC39A6Q13433 755 aa28.14■■■□□ 2.1
SDR39U1-208ENST00000554698 NUP188Q5SRE5 1749 aa28.13■■■□□ 2.09
SDR39U1-208ENST00000554698 BTBD11A6QL63 1104 aa28.13■■■□□ 2.09
SDR39U1-208ENST00000554698 KCNQ4P56696 695 aa28.12■■■□□ 2.09
SDR39U1-208ENST00000554698 CCDC27Q2M243 656 aa28.12■■■□□ 2.09
SDR39U1-208ENST00000554698 ZNF790Q6PG37 636 aa28.12■■■□□ 2.09
SDR39U1-208ENST00000554698 SLC4A9Q96Q91 983 aa28.11■■■□□ 2.09
SDR39U1-208ENST00000554698 KCPQ6ZWJ8 1503 aa28.11■■■□□ 2.09
SDR39U1-208ENST00000554698 PTCD1O75127 700 aaKnown RBP28.11■■■□□ 2.09
SDR39U1-208ENST00000554698 TTC5Q8N0Z6 440 aa28.1■■■□□ 2.09
SDR39U1-208ENST00000554698 RBM42Q9BTD8 480 aaKnown RBP28.1■■■□□ 2.09
SDR39U1-208ENST00000554698 SENP3-EIF4A1A0A087X0R7 540 aa28.09■■■□□ 2.09
SDR39U1-208ENST00000554698 ZNF831Q5JPB2 1677 aa28.08■■■□□ 2.09
SDR39U1-208ENST00000554698 ATP6V1AP38606 617 aa28.08■■■□□ 2.09
SDR39U1-208ENST00000554698 NGEFQ8N5V2 710 aa28.08■■■□□ 2.09
SDR39U1-208ENST00000554698 KCNQ3O43525 872 aa28.07■■■□□ 2.08
SDR39U1-208ENST00000554698 HMGB2P26583 209 aaKnown RBP28.07■■■□□ 2.08
SDR39U1-208ENST00000554698 ITPK1Q13572 414 aa28.07■■■□□ 2.08
SDR39U1-208ENST00000554698 BABAM1Q9NWV8 329 aa28.07■■■□□ 2.08
SDR39U1-208ENST00000554698 MIS18AQ9NYP9 233 aa28.07■■■□□ 2.08
SDR39U1-208ENST00000554698 UBR2Q8IWV8 1755 aa28.07■■■□□ 2.08
SDR39U1-208ENST00000554698 WWC1Q8IX03 1113 aa28.06■■■□□ 2.08
SDR39U1-208ENST00000554698 ZNF496Q96IT1 587 aaPredicted RBP28.06■■■□□ 2.08
SDR39U1-208ENST00000554698 ANO8Q9HCE9 1232 aaPredicted RBP28.06■■■□□ 2.08
SDR39U1-208ENST00000554698 CALD1Q05682 793 aaKnown RBP28.05■■■□□ 2.08
SDR39U1-208ENST00000554698 NBPF14Q5TI25 921 aa28.05■■■□□ 2.08
SDR39U1-208ENST00000554698 VSIG10Q8N0Z9 540 aa28.05■■■□□ 2.08
SDR39U1-208ENST00000554698 CICQ96RK0 1608 aaPredicted RBP28.03■■■□□ 2.08
SDR39U1-208ENST00000554698 CHL1O00533 1208 aa28.03■■■□□ 2.08
SDR39U1-208ENST00000554698 LINC00116Q8NCU8 138 aa28.03■■■□□ 2.08
SDR39U1-208ENST00000554698 FMNL2Q96PY5 1086 aa28.03■■■□□ 2.08
SDR39U1-208ENST00000554698 AKT1S1Q96B36 256 aa28.02■■■□□ 2.08
SDR39U1-208ENST00000554698 TSPYL4Q9UJ04 414 aa28.02■■■□□ 2.08
SDR39U1-208ENST00000554698 HEG1Q9ULI3 1381 aa28.02■■■□□ 2.08
SDR39U1-208ENST00000554698 C5P01031 1676 aa28.01■■■□□ 2.08
SDR39U1-208ENST00000554698 CFAP44Q96MT7 982 aa28.01■■■□□ 2.07
SDR39U1-208ENST00000554698 STK32BQ9NY57 414 aa28.01■■■□□ 2.07
SDR39U1-208ENST00000554698 KDM3BQ7LBC6 1761 aa28.01■■■□□ 2.07
SDR39U1-208ENST00000554698 ZNF853P0CG23 659 aa28■■■□□ 2.07
SDR39U1-208ENST00000554698 SLC15A2Q16348 729 aa28■■■□□ 2.07
SDR39U1-208ENST00000554698 ZNF827Q17R98 1081 aa28■■■□□ 2.07
SDR39U1-208ENST00000554698 SALL2Q9Y467 1007 aaPredicted RBP28■■■□□ 2.07
SDR39U1-208ENST00000554698 IFT57Q9NWB7 429 aa27.99■■■□□ 2.07
SDR39U1-208ENST00000554698 EIF4A1P60842 406 aaKnown RBP27.99■■■□□ 2.07
SDR39U1-208ENST00000554698 DNAJC10Q8IXB1 793 aa27.99■■■□□ 2.07
SDR39U1-208ENST00000554698 TJP1Q07157 1748 aa27.98■■■□□ 2.07
SDR39U1-208ENST00000554698 TAF1LQ8IZX4 1826 aa27.98■■■□□ 2.07
SDR39U1-208ENST00000554698 LAS1LQ9Y4W2 734 aaKnown RBP27.98■■■□□ 2.07
SDR39U1-208ENST00000554698 IL16Q14005 1332 aa27.97■■■□□ 2.07
SDR39U1-208ENST00000554698 C4BP0C0L5 1744 aa27.97■■■□□ 2.07
SDR39U1-208ENST00000554698 GNAI1P63096 354 aa27.97■■■□□ 2.07
SDR39U1-208ENST00000554698 WDR63Q8IWG1 891 aa27.97■■■□□ 2.07
SDR39U1-208ENST00000554698 CNTNAP4Q9C0A0 1308 aa27.96■■■□□ 2.07
SDR39U1-208ENST00000554698 R3HDM1Q15032 1099 aaKnown RBP27.96■■■□□ 2.07
SDR39U1-208ENST00000554698 ZNF521Q96K83 1311 aa27.96■■■□□ 2.07
SDR39U1-208ENST00000554698 COL5A3P25940 1745 aaPredicted RBP27.95■■■□□ 2.06
SDR39U1-208ENST00000554698 SNRPA1P09661 255 aaKnown RBP27.95■■■□□ 2.06
SDR39U1-208ENST00000554698 RC3H1Q5TC82 1133 aaKnown RBP27.95■■■□□ 2.06
SDR39U1-208ENST00000554698 TEX13AQ9BXU3 409 aaPredicted RBP27.95■■■□□ 2.06
SDR39U1-208ENST00000554698 MBIPQ9NS73 344 aa27.95■■■□□ 2.06
SDR39U1-208ENST00000554698 CYP19A1P11511 503 aaPredicted RBP27.94■■■□□ 2.06
SDR39U1-208ENST00000554698 AK7Q96M32 723 aa27.93■■■□□ 2.06
SDR39U1-208ENST00000554698 TFCP2L1Q9NZI6 479 aa27.93■■■□□ 2.06
SDR39U1-208ENST00000554698 PSDA5PKW4 1024 aaPredicted RBP27.92■■■□□ 2.06
SDR39U1-208ENST00000554698 GIGYF1O75420 1035 aaPredicted RBP27.92■■■□□ 2.06
SDR39U1-208ENST00000554698 CRKLP46109 303 aaKnown RBP27.92■■■□□ 2.06
SDR39U1-208ENST00000554698 PRAMEF22A3QJZ6 481 aa27.91■■■□□ 2.06
SDR39U1-208ENST00000554698 STARD3NLO95772 234 aa27.91■■■□□ 2.06
SDR39U1-208ENST00000554698 INTS5Q6P9B9 1019 aaKnown RBP27.9■■■□□ 2.06
SDR39U1-208ENST00000554698 GNPATO15228 680 aa27.89■■■□□ 2.06
SDR39U1-208ENST00000554698 CCDC87Q9NVE4 849 aa27.89■■■□□ 2.06
SDR39U1-208ENST00000554698 USP16Q9Y5T5 823 aa27.89■■■□□ 2.06
SDR39U1-208ENST00000554698 PNPLA7Q6ZV29 1317 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms