RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 CEP131Q9UPN4 1083 aa16.34■□□□□ 0.21
VTI1B-204ENST00000554659 TRIM27P14373 513 aa16.34■□□□□ 0.21
VTI1B-204ENST00000554659 MCM5P33992 734 aa16.34■□□□□ 0.21
VTI1B-204ENST00000554659 CFAP100Q494V2 611 aa16.34■□□□□ 0.21
VTI1B-204ENST00000554659 NUDT16Q96DE0 195 aaKnown RBP16.34■□□□□ 0.21
VTI1B-204ENST00000554659 DDX11Q96FC9 970 aa16.34■□□□□ 0.21
VTI1B-204ENST00000554659 FERMT3Q86UX7 667 aa16.33■□□□□ 0.21
VTI1B-204ENST00000554659 U3KPZ7 1027 aaPredicted RBP16.33■□□□□ 0.21
VTI1B-204ENST00000554659 EPB41L2O43491 1005 aaKnown RBP16.33■□□□□ 0.21
VTI1B-204ENST00000554659 CCDC102AQ96A19 550 aa16.33■□□□□ 0.21
VTI1B-204ENST00000554659 IQGAP2Q13576 1575 aa16.33■□□□□ 0.2
VTI1B-204ENST00000554659 MAGI1Q96QZ7 1491 aaPredicted RBP16.33■□□□□ 0.2
VTI1B-204ENST00000554659 SOGA3Q5TF21 947 aa16.33■□□□□ 0.2
VTI1B-204ENST00000554659 TBC1D32Q96NH3 1257 aa16.33■□□□□ 0.2
VTI1B-204ENST00000554659 TAF3Q5VWG9 929 aa16.33■□□□□ 0.2
VTI1B-204ENST00000554659 ABCA10Q8WWZ4 1543 aa16.33■□□□□ 0.2
VTI1B-204ENST00000554659 ZSCAN12O43309 604 aa16.32■□□□□ 0.2
VTI1B-204ENST00000554659 PROSER2Q86WR7 435 aaPredicted RBP16.32■□□□□ 0.2
VTI1B-204ENST00000554659 STK11IPQ8N1F8 1099 aa16.32■□□□□ 0.2
VTI1B-204ENST00000554659 MPHOSPH8Q99549 860 aa16.32■□□□□ 0.2
VTI1B-204ENST00000554659 LIMCH1Q9UPQ0 1083 aa16.32■□□□□ 0.2
VTI1B-204ENST00000554659 NSD2O96028 1365 aa16.32■□□□□ 0.2
VTI1B-204ENST00000554659 ARHGAP29Q52LW3 1261 aa16.32■□□□□ 0.2
VTI1B-204ENST00000554659 TANGO6Q9C0B7 1094 aa16.32■□□□□ 0.2
VTI1B-204ENST00000554659 TMCO3Q6UWJ1 677 aa16.32■□□□□ 0.2
VTI1B-204ENST00000554659 MCM10Q7L590 875 aa16.32■□□□□ 0.2
VTI1B-204ENST00000554659 GBP3Q9H0R5 595 aa16.32■□□□□ 0.2
VTI1B-204ENST00000554659 CTAGE5O15320 804 aa16.32■□□□□ 0.2
VTI1B-204ENST00000554659 TDO2P48775 406 aa16.32■□□□□ 0.2
VTI1B-204ENST00000554659 ARHGEF11O15085 1522 aa16.31■□□□□ 0.2
VTI1B-204ENST00000554659 PTPRCP08575 1304 aa16.31■□□□□ 0.2
VTI1B-204ENST00000554659 KIF18AQ8NI77 898 aa16.31■□□□□ 0.2
VTI1B-204ENST00000554659 LRRFIP2Q9Y608 721 aaKnown RBP16.31■□□□□ 0.2
VTI1B-204ENST00000554659 HMGB1P09429 215 aaKnown RBP16.31■□□□□ 0.2
VTI1B-204ENST00000554659 PAF1Q8N7H5 531 aa16.31■□□□□ 0.2
VTI1B-204ENST00000554659 PDCL3Q9H2J4 239 aa16.3■□□□□ 0.2
VTI1B-204ENST00000554659 SCAF11Q99590 1463 aaKnown RBP16.3■□□□□ 0.2
VTI1B-204ENST00000554659 CUL7Q14999 1698 aa16.3■□□□□ 0.2
VTI1B-204ENST00000554659 NEMFO60524 1076 aa16.3■□□□□ 0.2
VTI1B-204ENST00000554659 TBC1D9Q6ZT07 1266 aa16.3■□□□□ 0.2
VTI1B-204ENST00000554659 BMP2KQ9NSY1 1161 aaPredicted RBP16.29■□□□□ 0.2
VTI1B-204ENST00000554659 DDX19AQ9NUU7 478 aaKnown RBP16.29■□□□□ 0.2
VTI1B-204ENST00000554659 XPCQ01831 940 aaPredicted RBP16.29■□□□□ 0.2
VTI1B-204ENST00000554659 CCDC148Q8NFR7 591 aa16.29■□□□□ 0.2
VTI1B-204ENST00000554659 KLHL40Q2TBA0 621 aa16.29■□□□□ 0.2
VTI1B-204ENST00000554659 ANKRD18AQ8IVF6 992 aa16.29■□□□□ 0.2
VTI1B-204ENST00000554659 MIS18AQ9NYP9 233 aa16.29■□□□□ 0.2
VTI1B-204ENST00000554659 CLIP2Q9UDT6 1046 aa16.29■□□□□ 0.2
VTI1B-204ENST00000554659 LARP1Q6PKG0 1096 aaKnown RBP16.28■□□□□ 0.2
VTI1B-204ENST00000554659 IL16Q14005 1332 aa16.28■□□□□ 0.2
VTI1B-204ENST00000554659 TMEM132AQ24JP5 1023 aa16.28■□□□□ 0.2
VTI1B-204ENST00000554659 FAM135AQ9P2D6 1515 aa16.28■□□□□ 0.2
VTI1B-204ENST00000554659 BAG4O95429 457 aaKnown RBP16.28■□□□□ 0.2
VTI1B-204ENST00000554659 TAF7Q15545 349 aaPredicted RBP16.28■□□□□ 0.2
VTI1B-204ENST00000554659 TOM1L2Q6ZVM7 507 aa16.28■□□□□ 0.2
VTI1B-204ENST00000554659 USP25Q9UHP3 1055 aa16.28■□□□□ 0.2
VTI1B-204ENST00000554659 AKAP2Q9Y2D5 859 aa16.28■□□□□ 0.2
VTI1B-204ENST00000554659 EIF5P55010 431 aaKnown RBP16.27■□□□□ 0.2
VTI1B-204ENST00000554659 KIAA1328Q86T90 577 aa16.27■□□□□ 0.2
VTI1B-204ENST00000554659 AIDAQ96BJ3 306 aa16.27■□□□□ 0.2
VTI1B-204ENST00000554659 INCENPQ9NQS7 918 aa16.27■□□□□ 0.2
VTI1B-204ENST00000554659 CGNQ9P2M7 1197 aaKnown RBP16.27■□□□□ 0.2
VTI1B-204ENST00000554659 ZHX3Q9H4I2 956 aa16.27■□□□□ 0.2
VTI1B-204ENST00000554659 STRN4Q9NRL3 753 aa16.27■□□□□ 0.2
VTI1B-204ENST00000554659 IGHDP01880 384 aa16.27■□□□□ 0.2
VTI1B-204ENST00000554659 MEX3CQ5U5Q3 659 aaKnown RBP16.27■□□□□ 0.2
VTI1B-204ENST00000554659 KCNH5Q8NCM2 988 aa16.27■□□□□ 0.2
VTI1B-204ENST00000554659 KIF14Q15058 1648 aa16.27■□□□□ 0.19
VTI1B-204ENST00000554659 UVSSAQ2YD98 709 aa16.27■□□□□ 0.19
VTI1B-204ENST00000554659 PRDM10Q9NQV6 1147 aa16.27■□□□□ 0.19
VTI1B-204ENST00000554659 IDH1O75874 414 aaKnown RBP16.26■□□□□ 0.19
VTI1B-204ENST00000554659 EZRP15311 586 aaKnown RBP16.26■□□□□ 0.19
VTI1B-204ENST00000554659 HDAC1Q13547 482 aaPredicted RBP16.26■□□□□ 0.19
VTI1B-204ENST00000554659 BOLA2Q9H3K6 86 aa16.26■□□□□ 0.19
VTI1B-204ENST00000554659 ZNF397Q8NF99 534 aaPredicted RBP16.26■□□□□ 0.19
VTI1B-204ENST00000554659 DDX54Q8TDD1 881 aaKnown RBP16.26■□□□□ 0.19
VTI1B-204ENST00000554659 C8orf76Q96K31 380 aa16.26■□□□□ 0.19
VTI1B-204ENST00000554659 CBX1P83916 185 aa16.25■□□□□ 0.19
VTI1B-204ENST00000554659 TOP1P11387 765 aaKnown RBP16.25■□□□□ 0.19
VTI1B-204ENST00000554659 GSDMDP57764 484 aa16.25■□□□□ 0.19
VTI1B-204ENST00000554659 DYDC1Q8WWB3 177 aa16.25■□□□□ 0.19
VTI1B-204ENST00000554659 KIF5CO60282 957 aa16.25■□□□□ 0.19
VTI1B-204ENST00000554659 PRKCSHP14314 528 aaPredicted RBP16.25■□□□□ 0.19
VTI1B-204ENST00000554659 TTC22Q5TAA0 569 aa16.25■□□□□ 0.19
VTI1B-204ENST00000554659 TNNT1P13805 278 aa16.24■□□□□ 0.19
VTI1B-204ENST00000554659 TAF4BQ92750 862 aa16.24■□□□□ 0.19
VTI1B-204ENST00000554659 RAI14Q9P0K7 980 aa16.24■□□□□ 0.19
VTI1B-204ENST00000554659 LRP2BPQ9P2M1 347 aa16.24■□□□□ 0.19
VTI1B-204ENST00000554659 STX6O43752 255 aa16.24■□□□□ 0.19
VTI1B-204ENST00000554659 DNAAF4Q8WXU2 420 aa16.24■□□□□ 0.19
VTI1B-204ENST00000554659 CRACR2AQ9BSW2 395 aa16.24■□□□□ 0.19
VTI1B-204ENST00000554659 CCDC196A0A1B0GTZ2 297 aa16.24■□□□□ 0.19
VTI1B-204ENST00000554659 CASQ1P31415 396 aa16.24■□□□□ 0.19
VTI1B-204ENST00000554659 SLC26A8Q96RN1 970 aa16.24■□□□□ 0.19
VTI1B-204ENST00000554659 DISP3Q9P2K9 1392 aa16.24■□□□□ 0.19
VTI1B-204ENST00000554659 F6X3S4 739 aa16.23■□□□□ 0.19
VTI1B-204ENST00000554659 CAVIN2O95810 425 aa16.23■□□□□ 0.19
VTI1B-204ENST00000554659 ATP2B2Q01814 1243 aa16.23■□□□□ 0.19
VTI1B-204ENST00000554659 EVI5LQ96CN4 794 aa16.23■□□□□ 0.19
VTI1B-204ENST00000554659 RAPGEF3O95398 923 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms