RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 CARMIL3Q8ND23 1372 aa4.41□□□□□ -1.7
SEC23A-207ENST00000554615 HSP90AB1P08238 724 aaKnown RBP4.41□□□□□ -1.7
SEC23A-207ENST00000554615 CHMP4BQ9H444 224 aaKnown RBP4.41□□□□□ -1.7
SEC23A-207ENST00000554615 PDZRN3Q9UPQ7 1066 aa4.41□□□□□ -1.7
SEC23A-207ENST00000554615 DZIP1LQ8IYY4 767 aaKnown RBP4.41□□□□□ -1.7
SEC23A-207ENST00000554615 GNAI1P63096 354 aa4.41□□□□□ -1.7
SEC23A-207ENST00000554615 LMOD3Q0VAK6 560 aa4.41□□□□□ -1.7
SEC23A-207ENST00000554615 HS1BP3Q53T59 392 aa4.41□□□□□ -1.7
SEC23A-207ENST00000554615 WAPLQ7Z5K2 1190 aa4.41□□□□□ -1.7
SEC23A-207ENST00000554615 MORC1Q86VD1 984 aa4.41□□□□□ -1.7
SEC23A-207ENST00000554615 FAM43AQ8N2R8 423 aa4.41□□□□□ -1.7
SEC23A-207ENST00000554615 CFAP53Q96M91 514 aa4.41□□□□□ -1.7
SEC23A-207ENST00000554615 CCDC61Q9Y6R9 512 aa4.41□□□□□ -1.7
SEC23A-207ENST00000554615 CCDC88AQ3V6T2 1871 aa4.41□□□□□ -1.7
SEC23A-207ENST00000554615 COL5A2P05997 1499 aaPredicted RBP4.41□□□□□ -1.7
SEC23A-207ENST00000554615 COL4A1P02462 1669 aa4.4□□□□□ -1.7
SEC23A-207ENST00000554615 UBR3Q6ZT12 1888 aa4.4□□□□□ -1.7
SEC23A-207ENST00000554615 CCDC171Q6TFL3 1326 aa4.4□□□□□ -1.7
SEC23A-207ENST00000554615 DIAPH1O60610 1272 aaKnown RBP4.4□□□□□ -1.7
SEC23A-207ENST00000554615 GSPT1P15170 499 aaKnown RBP4.4□□□□□ -1.7
SEC23A-207ENST00000554615 PTMSP20962 102 aa4.4□□□□□ -1.7
SEC23A-207ENST00000554615 ZNF445P59923 1031 aa4.4□□□□□ -1.7
SEC23A-207ENST00000554615 TBC1D2Q9BYX2 928 aa4.4□□□□□ -1.7
SEC23A-207ENST00000554615 MBIPQ9NS73 344 aa4.4□□□□□ -1.7
SEC23A-207ENST00000554615 KCND1Q9NSA2 647 aa4.4□□□□□ -1.7
SEC23A-207ENST00000554615 LTKP29376 864 aa4.4□□□□□ -1.71
SEC23A-207ENST00000554615 EIF4A2Q14240 407 aaKnown RBP4.4□□□□□ -1.71
SEC23A-207ENST00000554615 NFKBIBQ15653 356 aa4.4□□□□□ -1.71
SEC23A-207ENST00000554615 RGL3Q3MIN7 710 aa4.4□□□□□ -1.71
SEC23A-207ENST00000554615 TSGA10IPQ3SY00 556 aa4.4□□□□□ -1.71
SEC23A-207ENST00000554615 RWDD1Q9H446 243 aaPredicted RBP4.4□□□□□ -1.71
SEC23A-207ENST00000554615 ANAPC15P60006 121 aa4.4□□□□□ -1.71
SEC23A-207ENST00000554615 TNNQ9UQP3 1299 aa4.4□□□□□ -1.71
SEC23A-207ENST00000554615 RIC1Q4ADV7 1423 aa4.4□□□□□ -1.71
SEC23A-207ENST00000554615 ADCY9O60503 1353 aa4.4□□□□□ -1.71
SEC23A-207ENST00000554615 ABCC12Q96J65 1359 aa4.4□□□□□ -1.71
SEC23A-207ENST00000554615 MYH7BA7E2Y1 1941 aa4.39□□□□□ -1.71
SEC23A-207ENST00000554615 FBXO31Q5XUX0 539 aaPredicted RBP4.39□□□□□ -1.71
SEC23A-207ENST00000554615 PLEKHM2Q8IWE5 1019 aa4.39□□□□□ -1.71
SEC23A-207ENST00000554615 RPAP2Q8IXW5 612 aaPredicted RBP4.39□□□□□ -1.71
SEC23A-207ENST00000554615 NUDT16Q96DE0 195 aaKnown RBP4.39□□□□□ -1.71
SEC23A-207ENST00000554615 PHACTR3Q96KR7 559 aa4.39□□□□□ -1.71
SEC23A-207ENST00000554615 BCL11AQ9H165 835 aa4.39□□□□□ -1.71
SEC23A-207ENST00000554615 PLIN1O60240 522 aa4.39□□□□□ -1.71
SEC23A-207ENST00000554615 DSG3P32926 999 aa4.39□□□□□ -1.71
SEC23A-207ENST00000554615 MED23Q9ULK4 1368 aa4.39□□□□□ -1.71
SEC23A-207ENST00000554615 SIPA1L1O43166 1804 aa4.39□□□□□ -1.71
SEC23A-207ENST00000554615 MEGF6O75095 1541 aa4.39□□□□□ -1.71
SEC23A-207ENST00000554615 ANP32AP39687 249 aaKnown RBP4.38□□□□□ -1.71
SEC23A-207ENST00000554615 CNGB1Q14028 1251 aaPredicted RBP4.38□□□□□ -1.71
SEC23A-207ENST00000554615 TTC22Q5TAA0 569 aa4.38□□□□□ -1.71
SEC23A-207ENST00000554615 CEP85Q6P2H3 762 aa4.38□□□□□ -1.71
SEC23A-207ENST00000554615 CHD1LQ86WJ1 897 aa4.38□□□□□ -1.71
SEC23A-207ENST00000554615 TMEM57Q8N5G2 664 aa4.38□□□□□ -1.71
SEC23A-207ENST00000554615 CABP2Q9NPB3 220 aa4.38□□□□□ -1.71
SEC23A-207ENST00000554615 MAP3K19Q56UN5 1328 aa4.38□□□□□ -1.71
SEC23A-207ENST00000554615 MYH6P13533 1939 aa4.38□□□□□ -1.71
SEC23A-207ENST00000554615 RGL2O15211 777 aa4.38□□□□□ -1.71
SEC23A-207ENST00000554615 TMEM132EQ6IEE7 984 aa4.38□□□□□ -1.71
SEC23A-207ENST00000554615 RBM43Q6ZSC3 357 aaKnown RBP4.38□□□□□ -1.71
SEC23A-207ENST00000554615 HDGFL2Q7Z4V5 671 aaPredicted RBP4.38□□□□□ -1.71
SEC23A-207ENST00000554615 SSH3Q8TE77 659 aa4.38□□□□□ -1.71
SEC23A-207ENST00000554615 INTS4Q96HW7 963 aaKnown RBP4.38□□□□□ -1.71
SEC23A-207ENST00000554615 TTC14Q96N46 770 aa4.38□□□□□ -1.71
SEC23A-207ENST00000554615 USP26Q9BXU7 913 aa4.38□□□□□ -1.71
SEC23A-207ENST00000554615 PLSCR2Q9NRY7 297 aa4.38□□□□□ -1.71
SEC23A-207ENST00000554615 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.38□□□□□ -1.71
SEC23A-207ENST00000554615 NAV1Q8NEY1 1877 aa4.38□□□□□ -1.71
SEC23A-207ENST00000554615 DEKP35659 375 aaKnown RBP4.38□□□□□ -1.71
SEC23A-207ENST00000554615 EXOSC9Q06265 439 aaKnown RBP4.38□□□□□ -1.71
SEC23A-207ENST00000554615 GSE1Q14687 1217 aa4.38□□□□□ -1.71
SEC23A-207ENST00000554615 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.38□□□□□ -1.71
SEC23A-207ENST00000554615 TRAK1Q9UPV9 953 aa4.38□□□□□ -1.71
SEC23A-207ENST00000554615 BCL11BQ9C0K0 894 aaPredicted RBP4.37□□□□□ -1.71
SEC23A-207ENST00000554615 NOB1Q9ULX3 412 aaKnown RBP4.37□□□□□ -1.71
SEC23A-207ENST00000554615 PARP14Q460N5 1801 aa4.37□□□□□ -1.71
SEC23A-207ENST00000554615 TNS1Q9HBL0 1735 aaKnown RBP4.37□□□□□ -1.71
SEC23A-207ENST00000554615 PALLDQ8WX93 1383 aa4.37□□□□□ -1.71
SEC23A-207ENST00000554615 IRX6P78412 446 aaPredicted RBP4.37□□□□□ -1.71
SEC23A-207ENST00000554615 ACEP12821 1306 aa4.37□□□□□ -1.71
SEC23A-207ENST00000554615 ERBB4Q15303 1308 aa4.37□□□□□ -1.71
SEC23A-207ENST00000554615 HDGFP51858 240 aaKnown RBP4.37□□□□□ -1.71
SEC23A-207ENST00000554615 NKX1-1Q15270 411 aaPredicted RBP4.37□□□□□ -1.71
SEC23A-207ENST00000554615 FUCA2Q9BTY2 467 aa4.37□□□□□ -1.71
SEC23A-207ENST00000554615 API5Q9BZZ5 524 aaKnown RBP4.37□□□□□ -1.71
SEC23A-207ENST00000554615 CABP1Q9NZU7 370 aa4.37□□□□□ -1.71
SEC23A-207ENST00000554615 BTAF1O14981 1849 aa4.37□□□□□ -1.71
SEC23A-207ENST00000554615 SIP14410 1827 aa4.37□□□□□ -1.71
SEC23A-207ENST00000554615 IPO8O15397 1037 aaKnown RBP4.36□□□□□ -1.71
SEC23A-207ENST00000554615 USPL1Q5W0Q7 1092 aa4.36□□□□□ -1.71
SEC23A-207ENST00000554615 PANK1Q8TE04 598 aa4.36□□□□□ -1.71
SEC23A-207ENST00000554615 ZDHHC9Q9Y397 364 aa4.36□□□□□ -1.71
SEC23A-207ENST00000554615 HAP1P54257 671 aaPredicted RBP4.36□□□□□ -1.71
SEC23A-207ENST00000554615 CASP7P55210 303 aa4.36□□□□□ -1.71
SEC23A-207ENST00000554615 AGXT2Q9BYV1 514 aa4.36□□□□□ -1.71
SEC23A-207ENST00000554615 COL1A1P02452 1464 aaPredicted RBP4.36□□□□□ -1.71
SEC23A-207ENST00000554615 NPM1P06748 294 aaKnown RBP eCLIP4.36□□□□□ -1.71
SEC23A-207ENST00000554615 PI4K2BQ8TCG2 481 aa4.36□□□□□ -1.71
SEC23A-207ENST00000554615 ZBTB47Q9UFB7 747 aaPredicted RBP4.36□□□□□ -1.71
SEC23A-207ENST00000554615 MAP3K15Q6ZN16 1313 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms