RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 OCLNQ16625 522 aa9.45□□□□□ -0.9
FOXN3-206ENST00000554005 B4GALNT3Q6L9W6 998 aa9.45□□□□□ -0.9
FOXN3-206ENST00000554005 XAGE2Q96GT9 111 aa9.45□□□□□ -0.9
FOXN3-206ENST00000554005 SLC4A9Q96Q91 983 aa9.45□□□□□ -0.9
FOXN3-206ENST00000554005 HINFPQ9BQA5 517 aa9.45□□□□□ -0.9
FOXN3-206ENST00000554005 FAM187AA6NFU0 413 aa9.44□□□□□ -0.9
FOXN3-206ENST00000554005 CLN3Q13286 438 aa9.44□□□□□ -0.9
FOXN3-206ENST00000554005 TNS4Q8IZW8 715 aa9.44□□□□□ -0.9
FOXN3-206ENST00000554005 PRIMPOLQ96LW4 560 aa9.44□□□□□ -0.9
FOXN3-206ENST00000554005 CAPN5O15484 640 aaPredicted RBP9.43□□□□□ -0.9
FOXN3-206ENST00000554005 KCNA1Q09470 495 aa9.43□□□□□ -0.9
FOXN3-206ENST00000554005 CNKSR1Q969H4 720 aa9.43□□□□□ -0.9
FOXN3-206ENST00000554005 ESYT1Q9BSJ8 1104 aa9.43□□□□□ -0.9
FOXN3-206ENST00000554005 HRH3Q9Y5N1 445 aa9.43□□□□□ -0.9
FOXN3-206ENST00000554005 ZBTB7CA1YPR0 619 aa9.42□□□□□ -0.9
FOXN3-206ENST00000554005 AVPP01185 164 aa9.42□□□□□ -0.9
FOXN3-206ENST00000554005 WEE1P30291 646 aa9.42□□□□□ -0.9
FOXN3-206ENST00000554005 ZNF395Q9H8N7 513 aaPredicted RBP9.42□□□□□ -0.9
FOXN3-206ENST00000554005 CXXC1Q9P0U4 656 aaPredicted RBP9.42□□□□□ -0.9
FOXN3-206ENST00000554005 MEN1O00255 615 aa9.41□□□□□ -0.9
FOXN3-206ENST00000554005 SMTNP53814 917 aa9.41□□□□□ -0.9
FOXN3-206ENST00000554005 MTFR1Q15390 333 aa9.41□□□□□ -0.9
FOXN3-206ENST00000554005 A6NJY4 79 aa9.4□□□□□ -0.9
FOXN3-206ENST00000554005 GFRA3O60609 400 aa9.4□□□□□ -0.9
FOXN3-206ENST00000554005 FOXK2Q01167 660 aa9.4□□□□□ -0.9
FOXN3-206ENST00000554005 TLR1Q15399 786 aa9.4□□□□□ -0.9
FOXN3-206ENST00000554005 TSEN34Q9BSV6 310 aaKnown RBP9.4□□□□□ -0.9
FOXN3-206ENST00000554005 TSPAN10Q9H1Z9 355 aaPredicted RBP9.4□□□□□ -0.9
FOXN3-206ENST00000554005 SCHIP1Q9P0W5 487 aaPredicted RBP9.4□□□□□ -0.9
FOXN3-206ENST00000554005 PATL2C9JE40 543 aaKnown RBP9.39□□□□□ -0.91
FOXN3-206ENST00000554005 NRG2O14511 850 aaPredicted RBP9.39□□□□□ -0.91
FOXN3-206ENST00000554005 LINC00528Q8N1L1 170 aa9.39□□□□□ -0.91
FOXN3-206ENST00000554005 GAS2L2Q8NHY3 880 aa9.39□□□□□ -0.91
FOXN3-206ENST00000554005 C1orf216Q8TAB5 229 aa9.39□□□□□ -0.91
FOXN3-206ENST00000554005 NLRP3Q96P20 1036 aa9.39□□□□□ -0.91
FOXN3-206ENST00000554005 PURBQ96QR8 312 aaKnown RBP9.39□□□□□ -0.91
FOXN3-206ENST00000554005 FHDC1Q9C0D6 1143 aaPredicted RBP9.39□□□□□ -0.91
FOXN3-206ENST00000554005 SPINT1O43278 529 aa9.38□□□□□ -0.91
FOXN3-206ENST00000554005 C21orf2O43822 256 aa9.38□□□□□ -0.91
FOXN3-206ENST00000554005 IGFBP4P22692 258 aa9.38□□□□□ -0.91
FOXN3-206ENST00000554005 SCNN1AP37088 669 aa9.38□□□□□ -0.91
FOXN3-206ENST00000554005 CENPCQ03188 943 aa9.38□□□□□ -0.91
FOXN3-206ENST00000554005 SLC9A9Q8IVB4 645 aa9.38□□□□□ -0.91
FOXN3-206ENST00000554005 SCG3Q8WXD2 468 aaKnown RBP9.38□□□□□ -0.91
FOXN3-206ENST00000554005 IQSEC3Q9UPP2 1182 aaPredicted RBP9.38□□□□□ -0.91
FOXN3-206ENST00000554005 USP3Q9Y6I4 520 aa9.38□□□□□ -0.91
FOXN3-206ENST00000554005 DGAT1O75907 488 aa9.37□□□□□ -0.91
FOXN3-206ENST00000554005 FKBP5Q13451 457 aaPredicted RBP9.37□□□□□ -0.91
FOXN3-206ENST00000554005 PKDCCQ504Y2 493 aa9.37□□□□□ -0.91
FOXN3-206ENST00000554005 TBCELQ5QJ74 424 aa9.37□□□□□ -0.91
FOXN3-206ENST00000554005 TAS1R3Q7RTX0 852 aa9.37□□□□□ -0.91
FOXN3-206ENST00000554005 INSM2Q96T92 566 aaPredicted RBP9.37□□□□□ -0.91
FOXN3-206ENST00000554005 GNEQ9Y223 722 aaKnown RBP9.37□□□□□ -0.91
FOXN3-206ENST00000554005 IVNS1ABPQ9Y6Y0 642 aa9.37□□□□□ -0.91
FOXN3-206ENST00000554005 ATAD2Q6PL18 1390 aa9.37□□□□□ -0.91
FOXN3-206ENST00000554005 CDK2AP1O14519 115 aa9.36□□□□□ -0.91
FOXN3-206ENST00000554005 UPP2O95045 317 aa9.36□□□□□ -0.91
FOXN3-206ENST00000554005 MRPL14Q6P1L8 145 aaKnown RBP9.36□□□□□ -0.91
FOXN3-206ENST00000554005 TXNDC2Q86VQ3 553 aa9.36□□□□□ -0.91
FOXN3-206ENST00000554005 ARID4AP29374 1257 aaPredicted RBP9.35□□□□□ -0.91
FOXN3-206ENST00000554005 SMCPP49901 116 aaPredicted RBP9.35□□□□□ -0.91
FOXN3-206ENST00000554005 CTC1Q2NKJ3 1217 aa9.35□□□□□ -0.91
FOXN3-206ENST00000554005 FOXO3O43524 673 aa9.34□□□□□ -0.91
FOXN3-206ENST00000554005 PPP1R12BO60237 982 aaPredicted RBP9.34□□□□□ -0.91
FOXN3-206ENST00000554005 BMP2P12643 396 aa9.34□□□□□ -0.91
FOXN3-206ENST00000554005 BMP1P13497 986 aa9.34□□□□□ -0.91
FOXN3-206ENST00000554005 GPC1P35052 558 aa9.34□□□□□ -0.91
FOXN3-206ENST00000554005 CTSOP43234 321 aaPredicted RBP9.34□□□□□ -0.91
FOXN3-206ENST00000554005 C6orf118Q5T5N4 469 aa9.34□□□□□ -0.91
FOXN3-206ENST00000554005 FOXD4L5Q5VV16 416 aaPredicted RBP9.34□□□□□ -0.91
FOXN3-206ENST00000554005 ZNF295-AS1Q8N0V1 137 aa9.34□□□□□ -0.91
FOXN3-206ENST00000554005 ZSCAN10Q96SZ4 725 aaPredicted RBP9.34□□□□□ -0.91
FOXN3-206ENST00000554005 MKNK1Q9BUB5 465 aa9.34□□□□□ -0.91
FOXN3-206ENST00000554005 RNF144AP50876 292 aaPredicted RBP9.33□□□□□ -0.92
FOXN3-206ENST00000554005 CAPN12Q6ZSI9 719 aa9.33□□□□□ -0.92
FOXN3-206ENST00000554005 TRIM46Q7Z4K8 759 aa9.33□□□□□ -0.92
FOXN3-206ENST00000554005 PPARGC1BQ86YN6 1023 aaKnown RBP9.33□□□□□ -0.92
FOXN3-206ENST00000554005 CRIPAKQ8N1N5 446 aa9.33□□□□□ -0.92
FOXN3-206ENST00000554005 NBPF15Q8N660 670 aa9.33□□□□□ -0.92
FOXN3-206ENST00000554005 CHMP7Q8WUX9 453 aaPredicted RBP9.33□□□□□ -0.92
FOXN3-206ENST00000554005 GRIP2Q9C0E4 1043 aa9.33□□□□□ -0.92
FOXN3-206ENST00000554005 POLMQ9NP87 494 aaPredicted RBP9.33□□□□□ -0.92
FOXN3-206ENST00000554005 PSMA6P60900 246 aaKnown RBP9.32□□□□□ -0.92
FOXN3-206ENST00000554005 LAPTM4AQ15012 233 aa9.32□□□□□ -0.92
FOXN3-206ENST00000554005 SLC27A3Q5K4L6 730 aa9.32□□□□□ -0.92
FOXN3-206ENST00000554005 STAG2Q8N3U4 1231 aa9.32□□□□□ -0.92
FOXN3-206ENST00000554005 CCER1Q8TC90 406 aaPredicted RBP9.32□□□□□ -0.92
FOXN3-206ENST00000554005 C2orf49Q9BVC5 232 aaPredicted RBP9.32□□□□□ -0.92
FOXN3-206ENST00000554005 GZF1Q9H116 711 aaPredicted RBP9.32□□□□□ -0.92
FOXN3-206ENST00000554005 PODXL2Q9NZ53 605 aa9.32□□□□□ -0.92
FOXN3-206ENST00000554005 AXIN1O15169 862 aa9.31□□□□□ -0.92
FOXN3-206ENST00000554005 SERPINB4P48594 390 aa9.31□□□□□ -0.92
FOXN3-206ENST00000554005 ZDHHC1Q8WTX9 485 aa9.31□□□□□ -0.92
FOXN3-206ENST00000554005 COL26A1Q96A83 441 aa9.31□□□□□ -0.92
FOXN3-206ENST00000554005 SEPT3Q9UH03 358 aa9.31□□□□□ -0.92
FOXN3-206ENST00000554005 PTCD1O75127 700 aaKnown RBP9.3□□□□□ -0.92
FOXN3-206ENST00000554005 SCARF1Q14162 830 aa9.3□□□□□ -0.92
FOXN3-206ENST00000554005 TMEM214Q6NUQ4 689 aaKnown RBP9.3□□□□□ -0.92
FOXN3-206ENST00000554005 POTEAQ6S8J7 498 aa9.3□□□□□ -0.92
FOXN3-206ENST00000554005 RNF217Q8TC41 542 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms