RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 REC8O95072 547 aa17.91■□□□□ 0.46
ACTN1-211ENST00000553882 GAS2L3Q86XJ1 694 aa17.91■□□□□ 0.46
ACTN1-211ENST00000553882 SLIT1O75093 1534 aa17.9■□□□□ 0.46
ACTN1-211ENST00000553882 ERC2O15083 957 aa17.9■□□□□ 0.46
ACTN1-211ENST00000553882 ARHGAP23Q9P227 1491 aa17.9■□□□□ 0.46
ACTN1-211ENST00000553882 LRRFIP2Q9Y608 721 aaKnown RBP17.89■□□□□ 0.46
ACTN1-211ENST00000553882 ZBTB7CA1YPR0 619 aa17.89■□□□□ 0.45
ACTN1-211ENST00000553882 PLEKHG5O94827 1062 aa17.89■□□□□ 0.45
ACTN1-211ENST00000553882 BAG4O95429 457 aaKnown RBP17.89■□□□□ 0.45
ACTN1-211ENST00000553882 ZGPATQ8N5A5 531 aaKnown RBP17.89■□□□□ 0.45
ACTN1-211ENST00000553882 LRRCC1Q9C099 1032 aa17.89■□□□□ 0.45
ACTN1-211ENST00000553882 MAP3K5Q99683 1374 aa17.89■□□□□ 0.45
ACTN1-211ENST00000553882 ST18O60284 1047 aa17.88■□□□□ 0.45
ACTN1-211ENST00000553882 GOLGA6L22H0YM25 854 aa17.88■□□□□ 0.45
ACTN1-211ENST00000553882 GNAI3P08754 354 aa17.88■□□□□ 0.45
ACTN1-211ENST00000553882 OSBPL3Q9H4L5 887 aa17.88■□□□□ 0.45
ACTN1-211ENST00000553882 HTATSF1O43719 755 aaKnown RBP17.87■□□□□ 0.45
ACTN1-211ENST00000553882 TAF7Q15545 349 aaPredicted RBP17.87■□□□□ 0.45
ACTN1-211ENST00000553882 SKOR2Q2VWA4 1001 aaPredicted RBP17.87■□□□□ 0.45
ACTN1-211ENST00000553882 RILPL2Q969X0 211 aa17.87■□□□□ 0.45
ACTN1-211ENST00000553882 PHAXQ9H814 394 aaKnown RBP17.87■□□□□ 0.45
ACTN1-211ENST00000553882 TRIM6-TRIM34B2RNG4 842 aa17.87■□□□□ 0.45
ACTN1-211ENST00000553882 MX1P20591 662 aa17.87■□□□□ 0.45
ACTN1-211ENST00000553882 HDGFL1Q5TGJ6 251 aa17.86■□□□□ 0.45
ACTN1-211ENST00000553882 MCTP1Q6DN14 999 aa17.86■□□□□ 0.45
ACTN1-211ENST00000553882 DDX49Q9Y6V7 483 aaKnown RBP17.86■□□□□ 0.45
ACTN1-211ENST00000553882 SETD1BQ9UPS6 1966 aaKnown RBP17.86■□□□□ 0.45
ACTN1-211ENST00000553882 EIF2S2P20042 333 aaKnown RBP17.86■□□□□ 0.45
ACTN1-211ENST00000553882 NWD1Q149M9 1564 aa17.85■□□□□ 0.45
ACTN1-211ENST00000553882 ATP8B2P98198 1209 aa17.85■□□□□ 0.45
ACTN1-211ENST00000553882 USP44Q9H0E7 712 aa17.85■□□□□ 0.45
ACTN1-211ENST00000553882 IL1RAPL2Q9NP60 686 aa17.85■□□□□ 0.45
ACTN1-211ENST00000553882 SALL3Q9BXA9 1300 aa17.84■□□□□ 0.45
ACTN1-211ENST00000553882 NEK4P51957 841 aa17.84■□□□□ 0.45
ACTN1-211ENST00000553882 FAM208AQ9UK61 1670 aaKnown RBP17.84■□□□□ 0.45
ACTN1-211ENST00000553882 UBTFL1P0CB47 393 aaPredicted RBP17.84■□□□□ 0.45
ACTN1-211ENST00000553882 NUCB2P80303 420 aa17.84■□□□□ 0.45
ACTN1-211ENST00000553882 LRRC37A3O60309 1634 aa17.83■□□□□ 0.45
ACTN1-211ENST00000553882 IBTKQ9P2D0 1353 aaPredicted RBP17.83■□□□□ 0.44
ACTN1-211ENST00000553882 PTMSP20962 102 aa17.83■□□□□ 0.44
ACTN1-211ENST00000553882 NOL8Q76FK4 1167 aaKnown RBP17.83■□□□□ 0.44
ACTN1-211ENST00000553882 UNC5CLQ8IV45 518 aa17.83■□□□□ 0.44
ACTN1-211ENST00000553882 CHAMP1Q96JM3 812 aa17.83■□□□□ 0.44
ACTN1-211ENST00000553882 ANO2Q9NQ90 1003 aa17.83■□□□□ 0.44
ACTN1-211ENST00000553882 NCLP19338 710 aaKnown RBP17.83■□□□□ 0.44
ACTN1-211ENST00000553882 ESYT1Q9BSJ8 1104 aa17.83■□□□□ 0.44
ACTN1-211ENST00000553882 ANKARQ7Z5J8 1434 aa17.82■□□□□ 0.44
ACTN1-211ENST00000553882 FOXD4L5Q5VV16 416 aaPredicted RBP17.82■□□□□ 0.44
ACTN1-211ENST00000553882 CLEC17AQ6ZS10 378 aa17.82■□□□□ 0.44
ACTN1-211ENST00000553882 FOXD4L4Q8WXT5 416 aaPredicted RBP17.82■□□□□ 0.44
ACTN1-211ENST00000553882 LGR6Q9HBX8 967 aa17.82■□□□□ 0.44
ACTN1-211ENST00000553882 PALD1Q9ULE6 856 aa17.82■□□□□ 0.44
ACTN1-211ENST00000553882 XRN1Q8IZH2 1706 aaKnown RBP17.82■□□□□ 0.44
ACTN1-211ENST00000553882 MARF1Q9Y4F3 1742 aaKnown RBP17.82■□□□□ 0.44
ACTN1-211ENST00000553882 NBPF6Q5VWK0 638 aa17.82■□□□□ 0.44
ACTN1-211ENST00000553882 NBPF4Q96M43 638 aa17.82■□□□□ 0.44
ACTN1-211ENST00000553882 ISY1Q9ULR0 285 aaKnown RBP17.82■□□□□ 0.44
ACTN1-211ENST00000553882 PHF8Q9UPP1 1060 aa17.82■□□□□ 0.44
ACTN1-211ENST00000553882 CYP2E1P05181 493 aaPredicted RBP17.81■□□□□ 0.44
ACTN1-211ENST00000553882 ANXA1P04083 346 aa17.81■□□□□ 0.44
ACTN1-211ENST00000553882 KLHL40Q2TBA0 621 aa17.81■□□□□ 0.44
ACTN1-211ENST00000553882 NUTM1Q86Y26 1132 aa17.81■□□□□ 0.44
ACTN1-211ENST00000553882 FER1L4A9Z1Z3 1794 aa17.8■□□□□ 0.44
ACTN1-211ENST00000553882 CHMLP26374 656 aa17.8■□□□□ 0.44
ACTN1-211ENST00000553882 KCNQ3O43525 872 aa17.8■□□□□ 0.44
ACTN1-211ENST00000553882 MAP4K4O95819 1239 aaPredicted RBP17.8■□□□□ 0.44
ACTN1-211ENST00000553882 PPP1R42Q7Z4L9 355 aa17.79■□□□□ 0.44
ACTN1-211ENST00000553882 LRRC59Q96AG4 307 aaKnown RBP17.79■□□□□ 0.44
ACTN1-211ENST00000553882 CWC22Q9HCG8 908 aaKnown RBP17.79■□□□□ 0.44
ACTN1-211ENST00000553882 CHPF2Q9P2E5 772 aa17.79■□□□□ 0.44
ACTN1-211ENST00000553882 SURF6O75683 361 aaKnown RBP17.79■□□□□ 0.44
ACTN1-211ENST00000553882 CAVIN1Q6NZI2 390 aaKnown RBP17.79■□□□□ 0.44
ACTN1-211ENST00000553882 ZDHHC9Q9Y397 364 aa17.79■□□□□ 0.44
ACTN1-211ENST00000553882 SOS1Q07889 1333 aaPredicted RBP17.78■□□□□ 0.44
ACTN1-211ENST00000553882 NBPF7P0C2Y1 421 aaPredicted RBP17.78■□□□□ 0.44
ACTN1-211ENST00000553882 TMX3Q96JJ7 454 aa17.78■□□□□ 0.44
ACTN1-211ENST00000553882 IL25Q9H293 177 aa17.78■□□□□ 0.44
ACTN1-211ENST00000553882 ESCO1Q5FWF5 840 aa17.78■□□□□ 0.44
ACTN1-211ENST00000553882 SRCIN1Q9C0H9 1055 aa17.78■□□□□ 0.44
ACTN1-211ENST00000553882 LMBRD1Q9NUN5 540 aa17.78■□□□□ 0.44
ACTN1-211ENST00000553882 PRPF40AO75400 957 aaKnown RBP17.77■□□□□ 0.44
ACTN1-211ENST00000553882 IP6K1Q92551 441 aa17.77■□□□□ 0.44
ACTN1-211ENST00000553882 UPF3BQ9BZI7 483 aaKnown RBP17.77■□□□□ 0.44
ACTN1-211ENST00000553882 SRGAP3O43295 1099 aa17.77■□□□□ 0.43
ACTN1-211ENST00000553882 XPCQ01831 940 aaPredicted RBP17.77■□□□□ 0.43
ACTN1-211ENST00000553882 PSME1Q06323 249 aa17.77■□□□□ 0.43
ACTN1-211ENST00000553882 PI4KAP2A4QPH2 592 aa17.76■□□□□ 0.43
ACTN1-211ENST00000553882 EIF4A1P60842 406 aaKnown RBP17.76■□□□□ 0.43
ACTN1-211ENST00000553882 MPRIPQ6WCQ1 1025 aa17.76■□□□□ 0.43
ACTN1-211ENST00000553882 PI4KAP1Q8N8J0 262 aa17.76■□□□□ 0.43
ACTN1-211ENST00000553882 SSH3Q8TE77 659 aa17.76■□□□□ 0.43
ACTN1-211ENST00000553882 MCCP23508 829 aa17.76■□□□□ 0.43
ACTN1-211ENST00000553882 BABAM1Q9NWV8 329 aa17.76■□□□□ 0.43
ACTN1-211ENST00000553882 STAP2Q9UGK3 403 aa17.76■□□□□ 0.43
ACTN1-211ENST00000553882 CACNA1FO60840 1977 aa17.76■□□□□ 0.43
ACTN1-211ENST00000553882 LTN1O94822 1766 aa17.76■□□□□ 0.43
ACTN1-211ENST00000553882 CEMIPQ8WUJ3 1361 aa17.75■□□□□ 0.43
ACTN1-211ENST00000553882 TRIM44Q96DX7 344 aaPredicted RBP17.75■□□□□ 0.43
ACTN1-211ENST00000553882 ERBB4Q15303 1308 aa17.75■□□□□ 0.43
ACTN1-211ENST00000553882 NASPP49321 788 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms