RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 TOGARAM1Q9Y4F4 1720 aa12.35□□□□□ -0.43
CHD8-206ENST00000553870 LOC102724428A0A0B4J2F2 783 aa12.35□□□□□ -0.43
CHD8-206ENST00000553870 SIK1P57059 783 aa12.35□□□□□ -0.43
CHD8-206ENST00000553870 TEFQ10587 303 aa12.35□□□□□ -0.43
CHD8-206ENST00000553870 R3HDM1Q15032 1099 aaKnown RBP12.35□□□□□ -0.43
CHD8-206ENST00000553870 NFE2L2Q16236 605 aa12.35□□□□□ -0.43
CHD8-206ENST00000553870 RUNDC1Q96C34 613 aa12.35□□□□□ -0.43
CHD8-206ENST00000553870 ADAMTS8Q9UP79 889 aa12.35□□□□□ -0.43
CHD8-206ENST00000553870 CEMIPQ8WUJ3 1361 aa12.34□□□□□ -0.43
CHD8-206ENST00000553870 LY75O60449 1722 aa12.34□□□□□ -0.43
CHD8-206ENST00000553870 SCN11AQ9UI33 1791 aa12.33□□□□□ -0.44
CHD8-206ENST00000553870 ATP6V1AP38606 617 aa12.33□□□□□ -0.44
CHD8-206ENST00000553870 AKT1S1Q96B36 256 aa12.33□□□□□ -0.44
CHD8-206ENST00000553870 NUP188Q5SRE5 1749 aa12.33□□□□□ -0.44
CHD8-206ENST00000553870 ADAMTS7Q9UKP4 1686 aa12.32□□□□□ -0.44
CHD8-206ENST00000553870 PSDA5PKW4 1024 aaPredicted RBP12.32□□□□□ -0.44
CHD8-206ENST00000553870 LMOD3Q0VAK6 560 aa12.32□□□□□ -0.44
CHD8-206ENST00000553870 VSIG10Q8N0Z9 540 aa12.32□□□□□ -0.44
CHD8-206ENST00000553870 ANO8Q9HCE9 1232 aaPredicted RBP12.32□□□□□ -0.44
CHD8-206ENST00000553870 MRC1P22897 1456 aa12.32□□□□□ -0.44
CHD8-206ENST00000553870 TMPOP42166 694 aaKnown RBP12.31□□□□□ -0.44
CHD8-206ENST00000553870 RIPK4P57078 832 aa12.31□□□□□ -0.44
CHD8-206ENST00000553870 TAF7Q15545 349 aaPredicted RBP12.31□□□□□ -0.44
CHD8-206ENST00000553870 RC3H1Q5TC82 1133 aaKnown RBP12.31□□□□□ -0.44
CHD8-206ENST00000553870 TTC5Q8N0Z6 440 aa12.31□□□□□ -0.44
CHD8-206ENST00000553870 FLAD1Q8NFF5 587 aa12.31□□□□□ -0.44
CHD8-206ENST00000553870 PNISRQ8TF01 805 aaKnown RBP12.31□□□□□ -0.44
CHD8-206ENST00000553870 RBM42Q9BTD8 480 aaKnown RBP12.31□□□□□ -0.44
CHD8-206ENST00000553870 MRS2Q9HD23 443 aa12.31□□□□□ -0.44
CHD8-206ENST00000553870 BTBD11A6QL63 1104 aa12.3□□□□□ -0.44
CHD8-206ENST00000553870 KCNQ4P56696 695 aa12.3□□□□□ -0.44
CHD8-206ENST00000553870 ZNF790Q6PG37 636 aa12.3□□□□□ -0.44
CHD8-206ENST00000553870 SLC16A10Q8TF71 515 aa12.3□□□□□ -0.44
CHD8-206ENST00000553870 TFCP2L1Q9NZI6 479 aa12.3□□□□□ -0.44
CHD8-206ENST00000553870 PTCD1O75127 700 aaKnown RBP12.29□□□□□ -0.44
CHD8-206ENST00000553870 ITPK1Q13572 414 aa12.29□□□□□ -0.44
CHD8-206ENST00000553870 ZNF827Q17R98 1081 aa12.29□□□□□ -0.44
CHD8-206ENST00000553870 CCDC184Q52MB2 194 aa12.29□□□□□ -0.44
CHD8-206ENST00000553870 NCBP3Q53F19 620 aaKnown RBP12.29□□□□□ -0.44
CHD8-206ENST00000553870 MCM10Q7L590 875 aa12.29□□□□□ -0.44
CHD8-206ENST00000553870 SLC4A9Q96Q91 983 aa12.29□□□□□ -0.44
CHD8-206ENST00000553870 TEX13AQ9BXU3 409 aaPredicted RBP12.29□□□□□ -0.44
CHD8-206ENST00000553870 BABAM1Q9NWV8 329 aa12.29□□□□□ -0.44
CHD8-206ENST00000553870 PAPPAQ13219 1627 aa12.29□□□□□ -0.44
CHD8-206ENST00000553870 ZNF831Q5JPB2 1677 aa12.29□□□□□ -0.44
CHD8-206ENST00000553870 SLC39A6Q13433 755 aa12.28□□□□□ -0.44
CHD8-206ENST00000553870 CCDC146Q8IYE0 955 aa12.28□□□□□ -0.44
CHD8-206ENST00000553870 AK7Q96M32 723 aa12.28□□□□□ -0.44
CHD8-206ENST00000553870 MAPK8IP2Q13387 824 aaPredicted RBP12.27□□□□□ -0.45
CHD8-206ENST00000553870 DCTN1Q14203 1278 aa12.27□□□□□ -0.45
CHD8-206ENST00000553870 LINC00116Q8NCU8 138 aa12.27□□□□□ -0.45
CHD8-206ENST00000553870 FMNL2Q96PY5 1086 aa12.27□□□□□ -0.45
CHD8-206ENST00000553870 SPON1Q9HCB6 807 aa12.27□□□□□ -0.45
CHD8-206ENST00000553870 CNTNAP4Q9C0A0 1308 aa12.27□□□□□ -0.45
CHD8-206ENST00000553870 STARD3NLO95772 234 aa12.26□□□□□ -0.45
CHD8-206ENST00000553870 SSFA2P28290 1259 aa12.26□□□□□ -0.45
CHD8-206ENST00000553870 MTFR1LQ9H019 292 aa12.26□□□□□ -0.45
CHD8-206ENST00000553870 CCER2I3L3R5 266 aa12.25□□□□□ -0.45
CHD8-206ENST00000553870 APAF1O14727 1248 aa12.25□□□□□ -0.45
CHD8-206ENST00000553870 RPS6KA4O75676 772 aa12.25□□□□□ -0.45
CHD8-206ENST00000553870 NEUROD2Q15784 382 aa12.25□□□□□ -0.45
CHD8-206ENST00000553870 ZNF496Q96IT1 587 aaPredicted RBP12.25□□□□□ -0.45
CHD8-206ENST00000553870 RTCBQ9Y3I0 505 aaKnown RBP12.25□□□□□ -0.45
CHD8-206ENST00000553870 PNPLA7Q6ZV29 1317 aa12.25□□□□□ -0.45
CHD8-206ENST00000553870 VIRMAQ69YN4 1812 aaKnown RBP12.25□□□□□ -0.45
CHD8-206ENST00000553870 GNPATO15228 680 aa12.24□□□□□ -0.45
CHD8-206ENST00000553870 C5P01031 1676 aa12.24□□□□□ -0.45
CHD8-206ENST00000553870 CYP19A1P11511 503 aaPredicted RBP12.24□□□□□ -0.45
CHD8-206ENST00000553870 CALD1Q05682 793 aaKnown RBP12.24□□□□□ -0.45
CHD8-206ENST00000553870 TRAPPC3LQ5T215 181 aa12.24□□□□□ -0.45
CHD8-206ENST00000553870 COL23A1Q86Y22 540 aaPredicted RBP12.24□□□□□ -0.45
CHD8-206ENST00000553870 DNAJC10Q8IXB1 793 aa12.24□□□□□ -0.45
CHD8-206ENST00000553870 TAF1LQ8IZX4 1826 aa12.24□□□□□ -0.45
CHD8-206ENST00000553870 HEG1Q9ULI3 1381 aa12.24□□□□□ -0.45
CHD8-206ENST00000553870 TRIM35Q9UPQ4 493 aa12.24□□□□□ -0.45
CHD8-206ENST00000553870 RRP7AQ9Y3A4 280 aaKnown RBP12.24□□□□□ -0.45
CHD8-206ENST00000553870 SIPA1L3O60292 1781 aaPredicted RBP12.23□□□□□ -0.45
CHD8-206ENST00000553870 C4BP0C0L5 1744 aa12.23□□□□□ -0.45
CHD8-206ENST00000553870 QSER1Q2KHR3 1735 aa12.23□□□□□ -0.45
CHD8-206ENST00000553870 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.23□□□□□ -0.45
CHD8-206ENST00000553870 SNRPA1P09661 255 aaKnown RBP12.23□□□□□ -0.45
CHD8-206ENST00000553870 CRKLP46109 303 aaKnown RBP12.23□□□□□ -0.45
CHD8-206ENST00000553870 CCDC27Q2M243 656 aa12.23□□□□□ -0.45
CHD8-206ENST00000553870 DIEXFQ68CQ4 756 aaKnown RBP12.23□□□□□ -0.45
CHD8-206ENST00000553870 NGEFQ8N5V2 710 aa12.23□□□□□ -0.45
CHD8-206ENST00000553870 PDGFDQ9GZP0 370 aaPredicted RBP12.23□□□□□ -0.45
CHD8-206ENST00000553870 DLG5Q8TDM6 1919 aa12.23□□□□□ -0.45
CHD8-206ENST00000553870 CICQ96RK0 1608 aaPredicted RBP12.22□□□□□ -0.45
CHD8-206ENST00000553870 KCPQ6ZWJ8 1503 aa12.22□□□□□ -0.45
CHD8-206ENST00000553870 CHL1O00533 1208 aa12.22□□□□□ -0.45
CHD8-206ENST00000553870 KCNQ3O43525 872 aa12.22□□□□□ -0.45
CHD8-206ENST00000553870 INTS5Q6P9B9 1019 aaKnown RBP12.22□□□□□ -0.45
CHD8-206ENST00000553870 THUMPD2Q9BTF0 503 aaKnown RBP12.22□□□□□ -0.45
CHD8-206ENST00000553870 CCDC87Q9NVE4 849 aa12.22□□□□□ -0.45
CHD8-206ENST00000553870 ZBTB7AO95365 584 aa12.21□□□□□ -0.45
CHD8-206ENST00000553870 CFAP44Q96MT7 982 aa12.21□□□□□ -0.45
CHD8-206ENST00000553870 MIS18AQ9NYP9 233 aa12.21□□□□□ -0.45
CHD8-206ENST00000553870 TSPYL4Q9UJ04 414 aa12.21□□□□□ -0.45
CHD8-206ENST00000553870 CASZ1Q86V15 1759 aa12.2□□□□□ -0.46
CHD8-206ENST00000553870 A0A087WZG4 1122 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms