RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 PTGER2P43116 358 aa13.66□□□□□ -0.22
HNRNPC-208ENST00000553753 RALBP1Q15311 655 aa13.66□□□□□ -0.22
HNRNPC-208ENST00000553753 GAS2L2Q8NHY3 880 aa13.66□□□□□ -0.22
HNRNPC-208ENST00000553753 SLC16A10Q8TF71 515 aa13.66□□□□□ -0.22
HNRNPC-208ENST00000553753 RSPH6AQ9H0K4 717 aa13.66□□□□□ -0.22
HNRNPC-208ENST00000553753 TAF1LQ8IZX4 1826 aa13.65□□□□□ -0.22
HNRNPC-208ENST00000553753 UTRNP46939 3433 aa13.65□□□□□ -0.22
HNRNPC-208ENST00000553753 RNMTO43148 476 aaKnown RBP13.65□□□□□ -0.22
HNRNPC-208ENST00000553753 FCHSD2O94868 740 aa13.65□□□□□ -0.22
HNRNPC-208ENST00000553753 PRKAR2BP31323 418 aa13.65□□□□□ -0.22
HNRNPC-208ENST00000553753 RBM42Q9BTD8 480 aaKnown RBP13.65□□□□□ -0.22
HNRNPC-208ENST00000553753 SLC52A2Q9HAB3 445 aa13.65□□□□□ -0.22
HNRNPC-208ENST00000553753 QSER1Q2KHR3 1735 aa13.64□□□□□ -0.23
HNRNPC-208ENST00000553753 SCN11AQ9UI33 1791 aa13.64□□□□□ -0.23
HNRNPC-208ENST00000553753 ITPK1Q13572 414 aa13.64□□□□□ -0.23
HNRNPC-208ENST00000553753 PHACTR3Q96KR7 559 aa13.64□□□□□ -0.23
HNRNPC-208ENST00000553753 AK7Q96M32 723 aa13.64□□□□□ -0.23
HNRNPC-208ENST00000553753 GNAT3A8MTJ3 354 aa13.63□□□□□ -0.23
HNRNPC-208ENST00000553753 COL23A1Q86Y22 540 aaPredicted RBP13.63□□□□□ -0.23
HNRNPC-208ENST00000553753 LINC00116Q8NCU8 138 aa13.63□□□□□ -0.23
HNRNPC-208ENST00000553753 FLAD1Q8NFF5 587 aa13.63□□□□□ -0.23
HNRNPC-208ENST00000553753 TUBGCP6Q96RT7 1819 aa13.63□□□□□ -0.23
HNRNPC-208ENST00000553753 PTCD1O75127 700 aaKnown RBP13.63□□□□□ -0.23
HNRNPC-208ENST00000553753 SLC4A9Q96Q91 983 aa13.63□□□□□ -0.23
HNRNPC-208ENST00000553753 SGIP1Q9BQI5 828 aa13.63□□□□□ -0.23
HNRNPC-208ENST00000553753 C4BP0C0L5 1744 aa13.62□□□□□ -0.23
HNRNPC-208ENST00000553753 GOLGB1Q14789 3259 aaKnown RBP13.62□□□□□ -0.23
HNRNPC-208ENST00000553753 MAP3K5Q99683 1374 aa13.61□□□□□ -0.23
HNRNPC-208ENST00000553753 IL17REQ8NFR9 667 aa13.6□□□□□ -0.23
HNRNPC-208ENST00000553753 ADAMTS7Q9UKP4 1686 aa13.6□□□□□ -0.23
HNRNPC-208ENST00000553753 MRC1P22897 1456 aa13.6□□□□□ -0.23
HNRNPC-208ENST00000553753 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.6□□□□□ -0.23
HNRNPC-208ENST00000553753 SSFA2P28290 1259 aa13.6□□□□□ -0.23
HNRNPC-208ENST00000553753 AMIGO3Q86WK7 504 aa13.6□□□□□ -0.23
HNRNPC-208ENST00000553753 MYBBP1AQ9BQG0 1328 aaKnown RBP13.6□□□□□ -0.23
HNRNPC-208ENST00000553753 VIRMAQ69YN4 1812 aaKnown RBP13.59□□□□□ -0.23
HNRNPC-208ENST00000553753 ZNF831Q5JPB2 1677 aa13.59□□□□□ -0.23
HNRNPC-208ENST00000553753 GNPATO15228 680 aa13.59□□□□□ -0.23
HNRNPC-208ENST00000553753 PHF14O94880 888 aa13.59□□□□□ -0.23
HNRNPC-208ENST00000553753 POLD1P28340 1107 aa13.59□□□□□ -0.23
HNRNPC-208ENST00000553753 TEFQ10587 303 aa13.59□□□□□ -0.23
HNRNPC-208ENST00000553753 SLC39A6Q13433 755 aa13.59□□□□□ -0.23
HNRNPC-208ENST00000553753 ARXQ96QS3 562 aa13.59□□□□□ -0.23
HNRNPC-208ENST00000553753 NEFMP07197 916 aa13.58□□□□□ -0.23
HNRNPC-208ENST00000553753 RC3H1Q5TC82 1133 aaKnown RBP13.58□□□□□ -0.23
HNRNPC-208ENST00000553753 SMIM5Q71RC9 77 aa13.58□□□□□ -0.23
HNRNPC-208ENST00000553753 UBR3Q6ZT12 1888 aa13.58□□□□□ -0.24
HNRNPC-208ENST00000553753 FHDC1Q9C0D6 1143 aaPredicted RBP13.58□□□□□ -0.24
HNRNPC-208ENST00000553753 RTF1Q92541 710 aaKnown RBP13.57□□□□□ -0.24
HNRNPC-208ENST00000553753 PNNQ9H307 717 aaKnown RBP13.57□□□□□ -0.24
HNRNPC-208ENST00000553753 PRKRIP1Q9H875 184 aaPredicted RBP13.57□□□□□ -0.24
HNRNPC-208ENST00000553753 RTCBQ9Y3I0 505 aaKnown RBP13.57□□□□□ -0.24
HNRNPC-208ENST00000553753 CNTNAP4Q9C0A0 1308 aa13.57□□□□□ -0.24
HNRNPC-208ENST00000553753 CEMIPQ8WUJ3 1361 aa13.57□□□□□ -0.24
HNRNPC-208ENST00000553753 PLEKHF1Q96S99 279 aa13.56□□□□□ -0.24
HNRNPC-208ENST00000553753 SYT17Q9BSW7 474 aa13.56□□□□□ -0.24
HNRNPC-208ENST00000553753 COL24A1Q17RW2 1714 aa13.55□□□□□ -0.24
HNRNPC-208ENST00000553753 TRAPPC3LQ5T215 181 aa13.55□□□□□ -0.24
HNRNPC-208ENST00000553753 MSL1Q68DK7 614 aa13.55□□□□□ -0.24
HNRNPC-208ENST00000553753 TTC5Q8N0Z6 440 aa13.55□□□□□ -0.24
HNRNPC-208ENST00000553753 COL5A3P25940 1745 aaPredicted RBP13.55□□□□□ -0.24
HNRNPC-208ENST00000553753 ZNF316A6NFI3 1004 aaPredicted RBP13.55□□□□□ -0.24
HNRNPC-208ENST00000553753 HTATSF1O43719 755 aaKnown RBP13.55□□□□□ -0.24
HNRNPC-208ENST00000553753 RPS6KA4O75676 772 aa13.55□□□□□ -0.24
HNRNPC-208ENST00000553753 CRKLP46109 303 aaKnown RBP13.55□□□□□ -0.24
HNRNPC-208ENST00000553753 ZNF790Q6PG37 636 aa13.55□□□□□ -0.24
HNRNPC-208ENST00000553753 MCM10Q7L590 875 aa13.55□□□□□ -0.24
HNRNPC-208ENST00000553753 VSIG10Q8N0Z9 540 aa13.55□□□□□ -0.24
HNRNPC-208ENST00000553753 ADRA2BP18089 450 aa13.54□□□□□ -0.24
HNRNPC-208ENST00000553753 DNAJC10Q8IXB1 793 aa13.54□□□□□ -0.24
HNRNPC-208ENST00000553753 MYH14Q7Z406 1995 aaKnown RBP13.54□□□□□ -0.24
HNRNPC-208ENST00000553753 BTBD11A6QL63 1104 aa13.53□□□□□ -0.24
HNRNPC-208ENST00000553753 ARHGEF1Q92888 912 aaKnown RBP13.53□□□□□ -0.24
HNRNPC-208ENST00000553753 KCPQ6ZWJ8 1503 aa13.53□□□□□ -0.24
HNRNPC-208ENST00000553753 MAPK8IP3Q9UPT6 1336 aa13.53□□□□□ -0.24
HNRNPC-208ENST00000553753 DCTN1Q14203 1278 aa13.53□□□□□ -0.24
HNRNPC-208ENST00000553753 INTS5Q6P9B9 1019 aaKnown RBP13.53□□□□□ -0.24
HNRNPC-208ENST00000553753 ZNF496Q96IT1 587 aaPredicted RBP13.53□□□□□ -0.24
HNRNPC-208ENST00000553753 CICQ96RK0 1608 aaPredicted RBP13.52□□□□□ -0.25
HNRNPC-208ENST00000553753 DCAF8L1A6NGE4 600 aa13.52□□□□□ -0.25
HNRNPC-208ENST00000553753 CYP19A1P11511 503 aaPredicted RBP13.52□□□□□ -0.25
HNRNPC-208ENST00000553753 RFC4P35249 363 aa13.52□□□□□ -0.25
HNRNPC-208ENST00000553753 KLHL34Q8N239 644 aa13.52□□□□□ -0.25
HNRNPC-208ENST00000553753 SIPA1L3O60292 1781 aaPredicted RBP13.52□□□□□ -0.25
HNRNPC-208ENST00000553753 TJP1Q07157 1748 aa13.52□□□□□ -0.25
HNRNPC-208ENST00000553753 NFE2L2Q16236 605 aa13.51□□□□□ -0.25
HNRNPC-208ENST00000553753 CCDC87Q9NVE4 849 aa13.51□□□□□ -0.25
HNRNPC-208ENST00000553753 UBR2Q8IWV8 1755 aa13.51□□□□□ -0.25
HNRNPC-208ENST00000553753 FMNL2Q96PY5 1086 aa13.5□□□□□ -0.25
HNRNPC-208ENST00000553753 STARD3NLO95772 234 aa13.5□□□□□ -0.25
HNRNPC-208ENST00000553753 WDR43Q15061 677 aaKnown RBP eCLIP13.5□□□□□ -0.25
HNRNPC-208ENST00000553753 NLGN1Q8N2Q7 840 aa13.5□□□□□ -0.25
HNRNPC-208ENST00000553753 TEX13AQ9BXU3 409 aaPredicted RBP13.5□□□□□ -0.25
HNRNPC-208ENST00000553753 HEG1Q9ULI3 1381 aa13.49□□□□□ -0.25
HNRNPC-208ENST00000553753 KCNQ3O43525 872 aa13.49□□□□□ -0.25
HNRNPC-208ENST00000553753 TAF7Q15545 349 aaPredicted RBP13.49□□□□□ -0.25
HNRNPC-208ENST00000553753 DLG5Q8TDM6 1919 aa13.48□□□□□ -0.25
HNRNPC-208ENST00000553753 GYS1P13807 737 aa13.48□□□□□ -0.25
HNRNPC-208ENST00000553753 ZBTB1Q9Y2K1 713 aa13.48□□□□□ -0.25
HNRNPC-208ENST00000553753 ADAMTS8Q9UP79 889 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms