RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 ERLIN1O75477 346 aa10.49□□□□□ -0.73
GTF2A1-203ENST00000553612 GOLGA6DP0CG33 693 aa10.49□□□□□ -0.73
GTF2A1-203ENST00000553612 SEPT7Q16181 437 aaKnown RBP10.49□□□□□ -0.73
GTF2A1-203ENST00000553612 LARP6Q9BRS8 491 aaKnown RBP10.49□□□□□ -0.73
GTF2A1-203ENST00000553612 GOLGA6AQ9NYA3 693 aa10.49□□□□□ -0.73
GTF2A1-203ENST00000553612 KIF3BO15066 747 aa10.49□□□□□ -0.73
GTF2A1-203ENST00000553612 TPP2P29144 1249 aaPredicted RBP10.49□□□□□ -0.73
GTF2A1-203ENST00000553612 TRDNQ13061 729 aa10.49□□□□□ -0.73
GTF2A1-203ENST00000553612 MAP7D1Q3KQU3 841 aa10.49□□□□□ -0.73
GTF2A1-203ENST00000553612 INCENPQ9NQS7 918 aa10.49□□□□□ -0.73
GTF2A1-203ENST00000553612 PFDN1O60925 122 aa10.49□□□□□ -0.73
GTF2A1-203ENST00000553612 CCDC175P0C221 793 aa10.49□□□□□ -0.73
GTF2A1-203ENST00000553612 PDE3BQ13370 1112 aa10.49□□□□□ -0.73
GTF2A1-203ENST00000553612 IMMTQ16891 758 aaKnown RBP10.49□□□□□ -0.73
GTF2A1-203ENST00000553612 ROCK2O75116 1388 aaKnown RBP10.49□□□□□ -0.73
GTF2A1-203ENST00000553612 MIPOL1Q8TD10 442 aa10.49□□□□□ -0.73
GTF2A1-203ENST00000553612 RBM33Q96EV2 1170 aaKnown RBP10.49□□□□□ -0.73
GTF2A1-203ENST00000553612 SPATA17Q96L03 361 aa10.49□□□□□ -0.73
GTF2A1-203ENST00000553612 DDX41Q9UJV9 622 aaKnown RBP10.49□□□□□ -0.73
GTF2A1-203ENST00000553612 EIF4E1BA6NMX2 242 aaKnown RBP10.49□□□□□ -0.73
GTF2A1-203ENST00000553612 NBPF10Q6P3W6 841 aaKnown RBP10.49□□□□□ -0.73
GTF2A1-203ENST00000553612 KIRREL3Q8IZU9 778 aa10.49□□□□□ -0.73
GTF2A1-203ENST00000553612 MED4Q9NPJ6 270 aa10.49□□□□□ -0.73
GTF2A1-203ENST00000553612 GOLGA3Q08378 1498 aa10.48□□□□□ -0.73
GTF2A1-203ENST00000553612 REC8O95072 547 aa10.48□□□□□ -0.73
GTF2A1-203ENST00000553612 IGBP1P78318 339 aa10.48□□□□□ -0.73
GTF2A1-203ENST00000553612 NAT10Q9H0A0 1025 aaKnown RBP10.48□□□□□ -0.73
GTF2A1-203ENST00000553612 H3BQV1 296 aa10.48□□□□□ -0.73
GTF2A1-203ENST00000553612 IFFO2Q5TF58 517 aa10.48□□□□□ -0.73
GTF2A1-203ENST00000553612 BUB1BO60566 1050 aaPredicted RBP10.48□□□□□ -0.73
GTF2A1-203ENST00000553612 MORC4Q8TE76 937 aa10.48□□□□□ -0.73
GTF2A1-203ENST00000553612 SPDL1Q96EA4 605 aa10.48□□□□□ -0.73
GTF2A1-203ENST00000553612 MTRQ99707 1265 aa10.48□□□□□ -0.73
GTF2A1-203ENST00000553612 ARFGAP3Q9NP61 516 aa10.48□□□□□ -0.73
GTF2A1-203ENST00000553612 hCG_2014768A0A024R1R8 64 aa10.47□□□□□ -0.73
GTF2A1-203ENST00000553612 SMIM24O75264 130 aa10.47□□□□□ -0.73
GTF2A1-203ENST00000553612 KDM4CQ9H3R0 1056 aa10.47□□□□□ -0.73
GTF2A1-203ENST00000553612 MYBBP1AQ9BQG0 1328 aaKnown RBP10.47□□□□□ -0.73
GTF2A1-203ENST00000553612 SLC4A10Q6U841 1118 aa10.47□□□□□ -0.73
GTF2A1-203ENST00000553612 CIZ1Q9ULV3 898 aaPredicted RBP10.47□□□□□ -0.73
GTF2A1-203ENST00000553612 NEK4P51957 841 aa10.47□□□□□ -0.73
GTF2A1-203ENST00000553612 NCBP1Q09161 790 aaKnown RBP10.47□□□□□ -0.73
GTF2A1-203ENST00000553612 TRIM11Q96F44 468 aa10.47□□□□□ -0.73
GTF2A1-203ENST00000553612 CFAP53Q96M91 514 aa10.47□□□□□ -0.73
GTF2A1-203ENST00000553612 ANO2Q9NQ90 1003 aa10.47□□□□□ -0.73
GTF2A1-203ENST00000553612 CTNNA3Q9UI47 895 aa10.47□□□□□ -0.73
GTF2A1-203ENST00000553612 DTNBO60941 627 aa10.47□□□□□ -0.73
GTF2A1-203ENST00000553612 DCTN1Q14203 1278 aa10.47□□□□□ -0.73
GTF2A1-203ENST00000553612 HHATQ5VTY9 493 aa10.47□□□□□ -0.73
GTF2A1-203ENST00000553612 NLRP13Q86W25 1043 aa10.47□□□□□ -0.73
GTF2A1-203ENST00000553612 SMARCE1Q969G3 411 aa10.47□□□□□ -0.73
GTF2A1-203ENST00000553612 MTUS2Q5JR59 1369 aa10.47□□□□□ -0.73
GTF2A1-203ENST00000553612 CLIP2Q9UDT6 1046 aa10.47□□□□□ -0.73
GTF2A1-203ENST00000553612 CAGE1Q8TC20 777 aa10.46□□□□□ -0.73
GTF2A1-203ENST00000553612 FAM210AQ96ND0 272 aa10.46□□□□□ -0.73
GTF2A1-203ENST00000553612 SEC31AO94979 1220 aaKnown RBP10.46□□□□□ -0.73
GTF2A1-203ENST00000553612 KLHL23Q8NBE8 558 aa10.46□□□□□ -0.73
GTF2A1-203ENST00000553612 SAAL1Q96ER3 474 aa10.46□□□□□ -0.73
GTF2A1-203ENST00000553612 FYB1O15117 783 aa10.46□□□□□ -0.73
GTF2A1-203ENST00000553612 U2AF1L5P0DN76 240 aaPredicted RBP10.46□□□□□ -0.73
GTF2A1-203ENST00000553612 U2AF1Q01081 240 aaKnown RBP eCLIP10.46□□□□□ -0.73
GTF2A1-203ENST00000553612 CEP128Q6ZU80 1094 aa10.46□□□□□ -0.73
GTF2A1-203ENST00000553612 SRLQ86TD4 932 aa10.46□□□□□ -0.73
GTF2A1-203ENST00000553612 TRIM74Q86UV6 250 aa10.46□□□□□ -0.73
GTF2A1-203ENST00000553612 TRIM73Q86UV7 250 aa10.46□□□□□ -0.73
GTF2A1-203ENST00000553612 ABTB1Q969K4 478 aaPredicted RBP10.46□□□□□ -0.73
GTF2A1-203ENST00000553612 ZMAT2Q96NC0 199 aaKnown RBP10.46□□□□□ -0.73
GTF2A1-203ENST00000553612 HYPKQ9NX55 129 aa10.46□□□□□ -0.73
GTF2A1-203ENST00000553612 ZNF189O75820 626 aaPredicted RBP10.46□□□□□ -0.74
GTF2A1-203ENST00000553612 SMC1AQ14683 1233 aaKnown RBP10.46□□□□□ -0.74
GTF2A1-203ENST00000553612 SYCP1Q15431 976 aa10.46□□□□□ -0.74
GTF2A1-203ENST00000553612 ANKRD18BA2A2Z9 1011 aa10.46□□□□□ -0.74
GTF2A1-203ENST00000553612 SNW1Q13573 536 aaKnown RBP10.46□□□□□ -0.74
GTF2A1-203ENST00000553612 TBC1D31Q96DN5 1066 aa10.46□□□□□ -0.74
GTF2A1-203ENST00000553612 TSPY4P0CV99 314 aa10.45□□□□□ -0.74
GTF2A1-203ENST00000553612 TSPY10P0CW01 314 aa10.45□□□□□ -0.74
GTF2A1-203ENST00000553612 CKAP2LQ8IYA6 745 aa10.45□□□□□ -0.74
GTF2A1-203ENST00000553612 GNL3LQ9NVN8 582 aaKnown RBP10.45□□□□□ -0.74
GTF2A1-203ENST00000553612 ZNF215Q9UL58 517 aaPredicted RBP10.45□□□□□ -0.74
GTF2A1-203ENST00000553612 USH1CQ9Y6N9 552 aa10.45□□□□□ -0.74
GTF2A1-203ENST00000553612 NOP2P46087 812 aaKnown RBP10.45□□□□□ -0.74
GTF2A1-203ENST00000553612 LCMT1Q9UIC8 334 aa10.45□□□□□ -0.74
GTF2A1-203ENST00000553612 ERCC3P19447 782 aa10.45□□□□□ -0.74
GTF2A1-203ENST00000553612 SF3A3Q12874 501 aaKnown RBP eCLIP10.45□□□□□ -0.748e-65■■■■□ 26.1
GTF2A1-203ENST00000553612 TRAF1Q13077 416 aa10.45□□□□□ -0.74
GTF2A1-203ENST00000553612 AKNAD1Q5T1N1 836 aa10.45□□□□□ -0.74
GTF2A1-203ENST00000553612 AKAP17AQ02040 695 aaKnown RBP10.45□□□□□ -0.74
GTF2A1-203ENST00000553612 HSP90AB2PQ58FF8 381 aa10.45□□□□□ -0.74
GTF2A1-203ENST00000553612 CCDC92Q53HC0 331 aaPredicted RBP10.45□□□□□ -0.74
GTF2A1-203ENST00000553612 CEP85LQ5SZL2 805 aa10.45□□□□□ -0.74
GTF2A1-203ENST00000553612 POLKQ9UBT6 870 aa10.45□□□□□ -0.74
GTF2A1-203ENST00000553612 DNAI1Q9UI46 699 aa10.45□□□□□ -0.74
GTF2A1-203ENST00000553612 KIF7Q2M1P5 1343 aa10.45□□□□□ -0.74
GTF2A1-203ENST00000553612 ACTN3Q08043 901 aaPredicted RBP10.44□□□□□ -0.74
GTF2A1-203ENST00000553612 TRIM29Q14134 588 aa10.44□□□□□ -0.74
GTF2A1-203ENST00000553612 ERCC6LQ2NKX8 1250 aa10.44□□□□□ -0.74
GTF2A1-203ENST00000553612 TACO1Q9BSH4 297 aaKnown RBP10.44□□□□□ -0.74
GTF2A1-203ENST00000553612 RBM42Q9BTD8 480 aaKnown RBP10.44□□□□□ -0.74
GTF2A1-203ENST00000553612 ZCCHC17Q9NP64 241 aaKnown RBP10.44□□□□□ -0.74
GTF2A1-203ENST00000553612 MRGBPQ9NV56 204 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms