RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 NFAT5O94916 1531 aa19.54■□□□□ 0.72
ABCD4-218ENST00000553486 LRRC37A3O60309 1634 aa19.54■□□□□ 0.72
ABCD4-218ENST00000553486 BACH2Q9BYV9 841 aa19.54■□□□□ 0.72
ABCD4-218ENST00000553486 NOB1Q9ULX3 412 aaKnown RBP19.54■□□□□ 0.72
ABCD4-218ENST00000553486 MBIPQ9NS73 344 aa19.53■□□□□ 0.72
ABCD4-218ENST00000553486 RREB1Q92766 1687 aa19.53■□□□□ 0.72
ABCD4-218ENST00000553486 IGHDP01880 384 aa19.53■□□□□ 0.72
ABCD4-218ENST00000553486 TRIM27P14373 513 aa19.53■□□□□ 0.72
ABCD4-218ENST00000553486 CDCA7Q9BWT1 371 aaPredicted RBP19.53■□□□□ 0.72
ABCD4-218ENST00000553486 VAMP4O75379 141 aa19.52■□□□□ 0.72
ABCD4-218ENST00000553486 CARD10Q9BWT7 1032 aa19.51■□□□□ 0.71
ABCD4-218ENST00000553486 DDX19BQ9UMR2 479 aa19.51■□□□□ 0.71
ABCD4-218ENST00000553486 KDRP35968 1356 aa19.51■□□□□ 0.71
ABCD4-218ENST00000553486 CSB-PGBD3P0DP91 1061 aa19.51■□□□□ 0.71
ABCD4-218ENST00000553486 ANP32AP39687 249 aaKnown RBP19.51■□□□□ 0.71
ABCD4-218ENST00000553486 ABCC6O95255 1503 aa19.5■□□□□ 0.71
ABCD4-218ENST00000553486 IGSF1Q8N6C5 1336 aa19.5■□□□□ 0.71
ABCD4-218ENST00000553486 HOXC9P31274 260 aa19.5■□□□□ 0.71
ABCD4-218ENST00000553486 NBPF14Q5TI25 921 aa19.5■□□□□ 0.71
ABCD4-218ENST00000553486 SKAP1Q86WV1 359 aa19.5■□□□□ 0.71
ABCD4-218ENST00000553486 NUP188Q5SRE5 1749 aa19.5■□□□□ 0.71
ABCD4-218ENST00000553486 DCTN1Q14203 1278 aa19.49■□□□□ 0.71
ABCD4-218ENST00000553486 EYA1Q99502 592 aa19.49■□□□□ 0.71
ABCD4-218ENST00000553486 RWDD1Q9H446 243 aaPredicted RBP19.49■□□□□ 0.71
ABCD4-218ENST00000553486 RTL1A6NKG5 1358 aa19.49■□□□□ 0.71
ABCD4-218ENST00000553486 MARCH10Q8NA82 808 aaPredicted RBP19.48■□□□□ 0.71
ABCD4-218ENST00000553486 PCDHB15Q9Y5E8 787 aa19.48■□□□□ 0.71
ABCD4-218ENST00000553486 BCL9O00512 1426 aa19.48■□□□□ 0.71
ABCD4-218ENST00000553486 TWISTNBQ3B726 338 aaPredicted RBP19.48■□□□□ 0.71
ABCD4-218ENST00000553486 ARHGAP45Q92619 1136 aa19.48■□□□□ 0.71
ABCD4-218ENST00000553486 LTN1O94822 1766 aa19.47■□□□□ 0.71
ABCD4-218ENST00000553486 PLSCR1O15162 318 aa19.47■□□□□ 0.71
ABCD4-218ENST00000553486 ITPRIPQ8IWB1 547 aa19.47■□□□□ 0.71
ABCD4-218ENST00000553486 MRPL50Q8N5N7 158 aaKnown RBP19.47■□□□□ 0.71
ABCD4-218ENST00000553486 BCL11BQ9C0K0 894 aaPredicted RBP19.47■□□□□ 0.71
ABCD4-218ENST00000553486 WNK3Q9BYP7 1800 aa19.46■□□□□ 0.71
ABCD4-218ENST00000553486 MSH5O43196 834 aa19.46■□□□□ 0.71
ABCD4-218ENST00000553486 TSPYL6Q8N831 410 aa19.46■□□□□ 0.71
ABCD4-218ENST00000553486 GAS2L2Q8NHY3 880 aa19.46■□□□□ 0.71
ABCD4-218ENST00000553486 PTF1AQ7RTS3 328 aa19.46■□□□□ 0.71
ABCD4-218ENST00000553486 RGPD5Q99666 1765 aa19.46■□□□□ 0.71
ABCD4-218ENST00000553486 CHL1O00533 1208 aa19.45■□□□□ 0.7
ABCD4-218ENST00000553486 RGS3P49796 1198 aa19.45■□□□□ 0.7
ABCD4-218ENST00000553486 TMEM57Q8N5G2 664 aa19.45■□□□□ 0.7
ABCD4-218ENST00000553486 RTF1Q92541 710 aaKnown RBP19.45■□□□□ 0.7
ABCD4-218ENST00000553486 ERBB3P21860 1342 aa19.45■□□□□ 0.7
ABCD4-218ENST00000553486 MTHFSDQ2M296 383 aaKnown RBP19.44■□□□□ 0.7
ABCD4-218ENST00000553486 C8orf58Q8NAV2 365 aa19.44■□□□□ 0.7
ABCD4-218ENST00000553486 CHMP4BQ9H444 224 aaKnown RBP19.44■□□□□ 0.7
ABCD4-218ENST00000553486 RGPD3A6NKT7 1758 aaPredicted RBP19.44■□□□□ 0.7
ABCD4-218ENST00000553486 RGPD4Q7Z3J3 1758 aa19.44■□□□□ 0.7
ABCD4-218ENST00000553486 EXOC5O00471 708 aa19.44■□□□□ 0.7
ABCD4-218ENST00000553486 FAM161AQ3B820 660 aa19.44■□□□□ 0.7
ABCD4-218ENST00000553486 MCM10Q7L590 875 aa19.44■□□□□ 0.7
ABCD4-218ENST00000553486 SBF2Q86WG5 1849 aa19.43■□□□□ 0.7
ABCD4-218ENST00000553486 ELL2O00472 640 aaPredicted RBP19.43■□□□□ 0.7
ABCD4-218ENST00000553486 HTATSF1O43719 755 aaKnown RBP19.43■□□□□ 0.7
ABCD4-218ENST00000553486 IP6K1Q92551 441 aa19.42■□□□□ 0.7
ABCD4-218ENST00000553486 TNS2Q63HR2 1409 aa19.42■□□□□ 0.7
ABCD4-218ENST00000553486 NLRP2Q9NX02 1062 aa19.41■□□□□ 0.7
ABCD4-218ENST00000553486 ERICH6Q7L0X2 663 aa19.4■□□□□ 0.7
ABCD4-218ENST00000553486 IPO9Q96P70 1041 aaKnown RBP19.4■□□□□ 0.7
ABCD4-218ENST00000553486 HDAC1Q13547 482 aaPredicted RBP19.39■□□□□ 0.7
ABCD4-218ENST00000553486 PROM2Q8N271 834 aa19.39■□□□□ 0.7
ABCD4-218ENST00000553486 LTV1Q96GA3 475 aaPredicted RBP19.39■□□□□ 0.7
ABCD4-218ENST00000553486 API5Q9BZZ5 524 aaKnown RBP19.39■□□□□ 0.7
ABCD4-218ENST00000553486 ANO8Q9HCE9 1232 aaPredicted RBP19.39■□□□□ 0.7
ABCD4-218ENST00000553486 ZBTB40Q9NUA8 1239 aa19.39■□□□□ 0.7
ABCD4-218ENST00000553486 ANKRD24Q8TF21 1146 aa19.38■□□□□ 0.69
ABCD4-218ENST00000553486 SPON1Q9HCB6 807 aa19.38■□□□□ 0.69
ABCD4-218ENST00000553486 IL2RBP14784 551 aa19.37■□□□□ 0.69
ABCD4-218ENST00000553486 ANP32EQ9BTT0 268 aa19.37■□□□□ 0.69
ABCD4-218ENST00000553486 GNAT3A8MTJ3 354 aa19.37■□□□□ 0.69
ABCD4-218ENST00000553486 KCNQ2O43526 872 aa19.37■□□□□ 0.69
ABCD4-218ENST00000553486 PDZRN3Q9UPQ7 1066 aa19.37■□□□□ 0.69
ABCD4-218ENST00000553486 VIRMAQ69YN4 1812 aaKnown RBP19.36■□□□□ 0.69
ABCD4-218ENST00000553486 C8orf34Q49A92 452 aa19.36■□□□□ 0.69
ABCD4-218ENST00000553486 NPM2Q86SE8 214 aaKnown RBP19.36■□□□□ 0.69
ABCD4-218ENST00000553486 ABCC4O15439 1325 aa19.35■□□□□ 0.69
ABCD4-218ENST00000553486 TXNRD1Q16881 649 aa19.35■□□□□ 0.69
ABCD4-218ENST00000553486 TSPYL4Q9UJ04 414 aa19.35■□□□□ 0.69
ABCD4-218ENST00000553486 PPP1R1BQ9UD71 204 aaPredicted RBP19.33■□□□□ 0.69
ABCD4-218ENST00000553486 NOP58Q9Y2X3 529 aaKnown RBP19.33■□□□□ 0.69
ABCD4-218ENST00000553486 MAP3K5Q99683 1374 aa19.33■□□□□ 0.69
ABCD4-218ENST00000553486 ZBTB7BO15156 539 aaPredicted RBP19.32■□□□□ 0.68
ABCD4-218ENST00000553486 ACSBG1Q96GR2 724 aa19.32■□□□□ 0.68
ABCD4-218ENST00000553486 PDGFDQ9GZP0 370 aaPredicted RBP19.32■□□□□ 0.68
ABCD4-218ENST00000553486 BABAM1Q9NWV8 329 aa19.32■□□□□ 0.68
ABCD4-218ENST00000553486 ZBTB47Q9UFB7 747 aaPredicted RBP19.32■□□□□ 0.68
ABCD4-218ENST00000553486 UTRNP46939 3433 aa19.31■□□□□ 0.68
ABCD4-218ENST00000553486 KRT24Q2M2I5 525 aa19.31■□□□□ 0.68
ABCD4-218ENST00000553486 NHSQ6T4R5 1651 aa19.31■□□□□ 0.68
ABCD4-218ENST00000553486 SMC5Q8IY18 1101 aa19.3■□□□□ 0.68
ABCD4-218ENST00000553486 MIS18AQ9NYP9 233 aa19.3■□□□□ 0.68
ABCD4-218ENST00000553486 PTPRCP08575 1304 aa19.3■□□□□ 0.68
ABCD4-218ENST00000553486 NBPF6Q5VWK0 638 aa19.3■□□□□ 0.68
ABCD4-218ENST00000553486 USHBP1Q8N6Y0 703 aa19.3■□□□□ 0.68
ABCD4-218ENST00000553486 NBPF4Q96M43 638 aa19.3■□□□□ 0.68
ABCD4-218ENST00000553486 RGPD2P0DJD1 1756 aa19.3■□□□□ 0.68
ABCD4-218ENST00000553486 CASZ1Q86V15 1759 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms