RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 PDE4AP27815 886 aa10.43□□□□□ -0.74
RAB5B-210ENST00000553116 EVA1CP58658 441 aa10.43□□□□□ -0.74
RAB5B-210ENST00000553116 FKBP5Q13451 457 aaPredicted RBP10.43□□□□□ -0.74
RAB5B-210ENST00000553116 NHSL1Q5SYE7 1610 aa10.43□□□□□ -0.74
RAB5B-210ENST00000553116 ABCC6O95255 1503 aa10.42□□□□□ -0.74
RAB5B-210ENST00000553116 NPM2Q86SE8 214 aaKnown RBP10.42□□□□□ -0.74
RAB5B-210ENST00000553116 MEGF6O75095 1541 aa10.42□□□□□ -0.74
RAB5B-210ENST00000553116 MSH5O43196 834 aa10.42□□□□□ -0.74
RAB5B-210ENST00000553116 G2E3Q7L622 706 aa10.41□□□□□ -0.74
RAB5B-210ENST00000553116 PDZRN3Q9UPQ7 1066 aa10.41□□□□□ -0.74
RAB5B-210ENST00000553116 F6X3S4 739 aa10.41□□□□□ -0.74
RAB5B-210ENST00000553116 ZBTB7BO15156 539 aaPredicted RBP10.41□□□□□ -0.74
RAB5B-210ENST00000553116 IFNL2Q8IZJ0 200 aa10.41□□□□□ -0.74
RAB5B-210ENST00000553116 USP35Q9P2H5 1018 aa10.41□□□□□ -0.74
RAB5B-210ENST00000553116 WDR17Q8IZU2 1322 aa10.41□□□□□ -0.74
RAB5B-210ENST00000553116 KCNQ3O43525 872 aa10.41□□□□□ -0.74
RAB5B-210ENST00000553116 ANP32AP39687 249 aaKnown RBP10.41□□□□□ -0.74
RAB5B-210ENST00000553116 FLIIQ13045 1269 aa10.41□□□□□ -0.74
RAB5B-210ENST00000553116 NBR1Q14596 966 aa10.41□□□□□ -0.74
RAB5B-210ENST00000553116 ROBO1Q9Y6N7 1651 aa10.41□□□□□ -0.74
RAB5B-210ENST00000553116 SOS1Q07889 1333 aaPredicted RBP10.41□□□□□ -0.74
RAB5B-210ENST00000553116 ABCA3Q99758 1704 aa10.4□□□□□ -0.74
RAB5B-210ENST00000553116 CACNA1FO60840 1977 aa10.4□□□□□ -0.74
RAB5B-210ENST00000553116 EIF4A1P60842 406 aaKnown RBP10.4□□□□□ -0.74
RAB5B-210ENST00000553116 HDAC1Q13547 482 aaPredicted RBP10.4□□□□□ -0.74
RAB5B-210ENST00000553116 CHMP4AQ9BY43 222 aa10.4□□□□□ -0.74
RAB5B-210ENST00000553116 PHKG2P15735 406 aa10.4□□□□□ -0.74
RAB5B-210ENST00000553116 BACH2Q9BYV9 841 aa10.4□□□□□ -0.74
RAB5B-210ENST00000553116 KDM3BQ7LBC6 1761 aa10.4□□□□□ -0.74
RAB5B-210ENST00000553116 INTS3Q68E01 1043 aaKnown RBP10.39□□□□□ -0.75
RAB5B-210ENST00000553116 OVOS2A0A0G2JMS6 1433 aa10.39□□□□□ -0.75
RAB5B-210ENST00000553116 COL5A2P05997 1499 aaPredicted RBP10.39□□□□□ -0.75
RAB5B-210ENST00000553116 FAM161AQ3B820 660 aa10.39□□□□□ -0.75
RAB5B-210ENST00000553116 HSP90AB1P08238 724 aaKnown RBP10.38□□□□□ -0.75
RAB5B-210ENST00000553116 CCT4P50991 539 aaKnown RBP10.38□□□□□ -0.75
RAB5B-210ENST00000553116 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.38□□□□□ -0.75
RAB5B-210ENST00000553116 RGS12O14924 1447 aa10.38□□□□□ -0.75
RAB5B-210ENST00000553116 PIP4K2BP78356 416 aa10.38□□□□□ -0.75
RAB5B-210ENST00000553116 TTC5Q8N0Z6 440 aa10.38□□□□□ -0.75
RAB5B-210ENST00000553116 ZBTB47Q9UFB7 747 aaPredicted RBP10.38□□□□□ -0.75
RAB5B-210ENST00000553116 SLC39A6Q13433 755 aa10.38□□□□□ -0.75
RAB5B-210ENST00000553116 LARP1Q6PKG0 1096 aaKnown RBP10.38□□□□□ -0.75
RAB5B-210ENST00000553116 NFATC2IPQ8NCF5 419 aa10.38□□□□□ -0.75
RAB5B-210ENST00000553116 CHPF2Q9P2E5 772 aa10.38□□□□□ -0.75
RAB5B-210ENST00000553116 SCN11AQ9UI33 1791 aa10.37□□□□□ -0.75
RAB5B-210ENST00000553116 HOXB7P09629 217 aa10.37□□□□□ -0.75
RAB5B-210ENST00000553116 DCAF5Q96JK2 942 aa10.37□□□□□ -0.75
RAB5B-210ENST00000553116 SLC52A2Q9HAB3 445 aa10.37□□□□□ -0.75
RAB5B-210ENST00000553116 BTG4Q9NY30 223 aa10.37□□□□□ -0.75
RAB5B-210ENST00000553116 ANXA1P04083 346 aa10.37□□□□□ -0.75
RAB5B-210ENST00000553116 CABP4P57796 275 aa10.37□□□□□ -0.75
RAB5B-210ENST00000553116 ZCRB1Q8TBF4 217 aaKnown RBP10.37□□□□□ -0.75
RAB5B-210ENST00000553116 MEIS3Q99687 375 aa10.37□□□□□ -0.75
RAB5B-210ENST00000553116 PARP4Q9UKK3 1724 aaKnown RBP10.37□□□□□ -0.75
RAB5B-210ENST00000553116 CYP27B1O15528 508 aa10.36□□□□□ -0.75
RAB5B-210ENST00000553116 KDM6AO15550 1401 aaPredicted RBP10.36□□□□□ -0.75
RAB5B-210ENST00000553116 IL2RBP14784 551 aa10.36□□□□□ -0.75
RAB5B-210ENST00000553116 DEKP35659 375 aaKnown RBP10.36□□□□□ -0.75
RAB5B-210ENST00000553116 DDX54Q8TDD1 881 aaKnown RBP10.36□□□□□ -0.75
RAB5B-210ENST00000553116 PCDH11XQ9BZA7 1347 aa10.36□□□□□ -0.75
RAB5B-210ENST00000553116 PCDH11YQ9BZA8 1340 aa10.36□□□□□ -0.75
RAB5B-210ENST00000553116 PHAXQ9H814 394 aaKnown RBP10.36□□□□□ -0.75
RAB5B-210ENST00000553116 KAT6BQ8WYB5 2073 aa10.36□□□□□ -0.75
RAB5B-210ENST00000553116 ANKRD45Q5TZF3 282 aa10.36□□□□□ -0.75
RAB5B-210ENST00000553116 CARD10Q9BWT7 1032 aa10.36□□□□□ -0.75
RAB5B-210ENST00000553116 LNPKQ9C0E8 428 aa10.36□□□□□ -0.75
RAB5B-210ENST00000553116 ZNF790Q6PG37 636 aa10.36□□□□□ -0.75
RAB5B-210ENST00000553116 SMC5Q8IY18 1101 aa10.36□□□□□ -0.75
RAB5B-210ENST00000553116 PKD1L3Q7Z443 1732 aa10.35□□□□□ -0.75
RAB5B-210ENST00000553116 GCC1Q96CN9 775 aa10.35□□□□□ -0.75
RAB5B-210ENST00000553116 SIPA1L3O60292 1781 aaPredicted RBP10.35□□□□□ -0.75
RAB5B-210ENST00000553116 DBF4Q9UBU7 674 aaPredicted RBP10.35□□□□□ -0.75
RAB5B-210ENST00000553116 LTBP4Q8N2S1 1624 aa10.35□□□□□ -0.75
RAB5B-210ENST00000553116 GIGYF1O75420 1035 aaPredicted RBP10.35□□□□□ -0.75
RAB5B-210ENST00000553116 PRAMEF22A3QJZ6 481 aa10.34□□□□□ -0.75
RAB5B-210ENST00000553116 ADAMTS2O95450 1211 aa10.34□□□□□ -0.75
RAB5B-210ENST00000553116 TOM1O60784 492 aa10.34□□□□□ -0.75
RAB5B-210ENST00000553116 C8orf34Q49A92 452 aa10.34□□□□□ -0.75
RAB5B-210ENST00000553116 AHDC1Q5TGY3 1603 aaPredicted RBP10.33□□□□□ -0.76
RAB5B-210ENST00000553116 APBB1O00213 710 aa10.33□□□□□ -0.76
RAB5B-210ENST00000553116 HMMRO75330 724 aa10.33□□□□□ -0.76
RAB5B-210ENST00000553116 CHD1LQ86WJ1 897 aa10.33□□□□□ -0.76
RAB5B-210ENST00000553116 PHLPP1O60346 1717 aa10.33□□□□□ -0.76
RAB5B-210ENST00000553116 PLEKHG2Q9H7P9 1386 aa10.33□□□□□ -0.76
RAB5B-210ENST00000553116 NUTM2BA6NNL0 878 aaPredicted RBP10.33□□□□□ -0.76
RAB5B-210ENST00000553116 NUTM2EB1AL46 878 aaPredicted RBP10.33□□□□□ -0.76
RAB5B-210ENST00000553116 GNAI2P04899 355 aa10.33□□□□□ -0.76
RAB5B-210ENST00000553116 GNAI3P08754 354 aa10.33□□□□□ -0.76
RAB5B-210ENST00000553116 NUTM2AQ8IVF1 878 aaPredicted RBP10.33□□□□□ -0.76
RAB5B-210ENST00000553116 ADAMTS7Q9UKP4 1686 aa10.33□□□□□ -0.76
RAB5B-210ENST00000553116 PI4KAP2A4QPH2 592 aa10.33□□□□□ -0.76
RAB5B-210ENST00000553116 NUCB1Q02818 461 aa10.33□□□□□ -0.76
RAB5B-210ENST00000553116 AIMP1Q12904 312 aaKnown RBP10.33□□□□□ -0.76
RAB5B-210ENST00000553116 SIRT2Q8IXJ6 389 aa10.33□□□□□ -0.76
RAB5B-210ENST00000553116 RPAP2Q8IXW5 612 aaPredicted RBP10.33□□□□□ -0.76
RAB5B-210ENST00000553116 ANKRD44Q8N8A2 993 aa10.33□□□□□ -0.76
RAB5B-210ENST00000553116 PI4KAP1Q8N8J0 262 aa10.33□□□□□ -0.76
RAB5B-210ENST00000553116 SRCIN1Q9C0H9 1055 aa10.33□□□□□ -0.76
RAB5B-210ENST00000553116 CEP85Q6P2H3 762 aa10.32□□□□□ -0.76
RAB5B-210ENST00000553116 FMNL2Q96PY5 1086 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms