RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 KDM6AO15550 1401 aaPredicted RBP13.78□□□□□ -0.2
PFDN5-216ENST00000552341 KCNQ3O43525 872 aa13.77□□□□□ -0.21
PFDN5-216ENST00000552341 HDAC1Q13547 482 aaPredicted RBP13.77□□□□□ -0.21
PFDN5-216ENST00000552341 INTS3Q68E01 1043 aaKnown RBP13.77□□□□□ -0.21
PFDN5-216ENST00000552341 PHKG2P15735 406 aa13.76□□□□□ -0.21
PFDN5-216ENST00000552341 TEFQ10587 303 aa13.76□□□□□ -0.21
PFDN5-216ENST00000552341 RWDD1Q9H446 243 aaPredicted RBP13.76□□□□□ -0.21
PFDN5-216ENST00000552341 COL22A1Q8NFW1 1626 aaPredicted RBP13.76□□□□□ -0.21
PFDN5-216ENST00000552341 HEG1Q9ULI3 1381 aa13.76□□□□□ -0.21
PFDN5-216ENST00000552341 BTBD11A6QL63 1104 aa13.76□□□□□ -0.21
PFDN5-216ENST00000552341 SPG7Q9UQ90 795 aa13.76□□□□□ -0.21
PFDN5-216ENST00000552341 PARP4Q9UKK3 1724 aaKnown RBP13.75□□□□□ -0.21
PFDN5-216ENST00000552341 CYP27B1O15528 508 aa13.75□□□□□ -0.21
PFDN5-216ENST00000552341 CCDC30Q5VVM6 783 aa13.75□□□□□ -0.21
PFDN5-216ENST00000552341 HOXB7P09629 217 aa13.74□□□□□ -0.21
PFDN5-216ENST00000552341 MRC1P22897 1456 aa13.74□□□□□ -0.21
PFDN5-216ENST00000552341 PDE4AP27815 886 aa13.73□□□□□ -0.21
PFDN5-216ENST00000552341 IFNL2Q8IZJ0 200 aa13.73□□□□□ -0.21
PFDN5-216ENST00000552341 BACH2Q9BYV9 841 aa13.73□□□□□ -0.21
PFDN5-216ENST00000552341 CHMP4BQ9H444 224 aaKnown RBP13.73□□□□□ -0.21
PFDN5-216ENST00000552341 SHANK3Q9BYB0 1731 aa13.73□□□□□ -0.21
PFDN5-216ENST00000552341 SMC5Q8IY18 1101 aa13.72□□□□□ -0.21
PFDN5-216ENST00000552341 CARD10Q9BWT7 1032 aa13.72□□□□□ -0.21
PFDN5-216ENST00000552341 STK31Q9BXU1 1019 aa13.72□□□□□ -0.21
PFDN5-216ENST00000552341 COL16A1Q07092 1604 aaPredicted RBP13.72□□□□□ -0.21
PFDN5-216ENST00000552341 N4BP2Q86UW6 1770 aaPredicted RBP13.72□□□□□ -0.21
PFDN5-216ENST00000552341 FLIIQ13045 1269 aa13.72□□□□□ -0.21
PFDN5-216ENST00000552341 HDGFL1Q5TGJ6 251 aa13.72□□□□□ -0.21
PFDN5-216ENST00000552341 TOM1L2Q6ZVM7 507 aa13.72□□□□□ -0.21
PFDN5-216ENST00000552341 NECTIN2Q92692 538 aa13.72□□□□□ -0.21
PFDN5-216ENST00000552341 SLC52A2Q9HAB3 445 aa13.72□□□□□ -0.21
PFDN5-216ENST00000552341 PDZRN3Q9UPQ7 1066 aa13.72□□□□□ -0.21
PFDN5-216ENST00000552341 RGS3P49796 1198 aa13.71□□□□□ -0.21
PFDN5-216ENST00000552341 LARP1Q6PKG0 1096 aaKnown RBP13.71□□□□□ -0.21
PFDN5-216ENST00000552341 SIRT2Q8IXJ6 389 aa13.71□□□□□ -0.21
PFDN5-216ENST00000552341 COL14A1Q05707 1796 aaKnown RBP13.71□□□□□ -0.22
PFDN5-216ENST00000552341 F6X3S4 739 aa13.71□□□□□ -0.22
PFDN5-216ENST00000552341 GIGYF1O75420 1035 aaPredicted RBP13.71□□□□□ -0.22
PFDN5-216ENST00000552341 DCAF5Q96JK2 942 aa13.71□□□□□ -0.22
PFDN5-216ENST00000552341 C1orf115Q9H7X2 142 aa13.7□□□□□ -0.22
PFDN5-216ENST00000552341 PHLPP1O60346 1717 aa13.69□□□□□ -0.22
PFDN5-216ENST00000552341 NFATC2IPQ8NCF5 419 aa13.69□□□□□ -0.22
PFDN5-216ENST00000552341 ATP10DQ9P241 1426 aa13.69□□□□□ -0.22
PFDN5-216ENST00000552341 ZNF790Q6PG37 636 aa13.69□□□□□ -0.22
PFDN5-216ENST00000552341 STRN4Q9NRL3 753 aa13.69□□□□□ -0.22
PFDN5-216ENST00000552341 IL2RBP14784 551 aa13.68□□□□□ -0.22
PFDN5-216ENST00000552341 EIF2S2P20042 333 aaKnown RBP13.68□□□□□ -0.22
PFDN5-216ENST00000552341 ZCRB1Q8TBF4 217 aaKnown RBP13.68□□□□□ -0.22
PFDN5-216ENST00000552341 PHAXQ9H814 394 aaKnown RBP13.68□□□□□ -0.22
PFDN5-216ENST00000552341 BTG4Q9NY30 223 aa13.68□□□□□ -0.22
PFDN5-216ENST00000552341 CHPF2Q9P2E5 772 aa13.68□□□□□ -0.22
PFDN5-216ENST00000552341 C5P01031 1676 aa13.68□□□□□ -0.22
PFDN5-216ENST00000552341 PRAMEF22A3QJZ6 481 aa13.67□□□□□ -0.22
PFDN5-216ENST00000552341 HSP90AB1P08238 724 aaKnown RBP13.67□□□□□ -0.22
PFDN5-216ENST00000552341 CCT4P50991 539 aaKnown RBP13.67□□□□□ -0.22
PFDN5-216ENST00000552341 SLC39A6Q13433 755 aa13.67□□□□□ -0.22
PFDN5-216ENST00000552341 FKBP5Q13451 457 aaPredicted RBP13.67□□□□□ -0.22
PFDN5-216ENST00000552341 C8orf34Q49A92 452 aa13.67□□□□□ -0.22
PFDN5-216ENST00000552341 MEIS3Q99687 375 aa13.67□□□□□ -0.22
PFDN5-216ENST00000552341 PXDNLA1KZ92 1463 aa13.67□□□□□ -0.22
PFDN5-216ENST00000552341 EVA1CP58658 441 aa13.67□□□□□ -0.22
PFDN5-216ENST00000552341 NKX1-1Q15270 411 aaPredicted RBP13.67□□□□□ -0.22
PFDN5-216ENST00000552341 CHMP4AQ9BY43 222 aa13.67□□□□□ -0.22
PFDN5-216ENST00000552341 PCDH11XQ9BZA7 1347 aa13.67□□□□□ -0.22
PFDN5-216ENST00000552341 PCDH11YQ9BZA8 1340 aa13.67□□□□□ -0.22
PFDN5-216ENST00000552341 GLI3P10071 1580 aa13.67□□□□□ -0.22
PFDN5-216ENST00000552341 NUCB1Q02818 461 aa13.65□□□□□ -0.22
PFDN5-216ENST00000552341 SLC4A10Q6U841 1118 aa13.65□□□□□ -0.22
PFDN5-216ENST00000552341 FAM161AQ3B820 660 aa13.65□□□□□ -0.22
PFDN5-216ENST00000552341 ANKRD44Q8N8A2 993 aa13.65□□□□□ -0.22
PFDN5-216ENST00000552341 DBF4Q9UBU7 674 aaPredicted RBP13.65□□□□□ -0.22
PFDN5-216ENST00000552341 DISP2A7MBM2 1401 aa13.64□□□□□ -0.23
PFDN5-216ENST00000552341 ZNF496Q96IT1 587 aaPredicted RBP13.64□□□□□ -0.23
PFDN5-216ENST00000552341 PLCH1Q4KWH8 1693 aa13.64□□□□□ -0.23
PFDN5-216ENST00000552341 ANXA1P04083 346 aa13.63□□□□□ -0.23
PFDN5-216ENST00000552341 PROSER3Q2NL68 480 aa13.63□□□□□ -0.23
PFDN5-216ENST00000552341 CEP85Q6P2H3 762 aa13.63□□□□□ -0.23
PFDN5-216ENST00000552341 GCC1Q96CN9 775 aa13.63□□□□□ -0.23
PFDN5-216ENST00000552341 TOGARAM1Q9Y4F4 1720 aa13.63□□□□□ -0.23
PFDN5-216ENST00000552341 PAPPAQ13219 1627 aa13.63□□□□□ -0.23
PFDN5-216ENST00000552341 UBR2Q8IWV8 1755 aa13.63□□□□□ -0.23
PFDN5-216ENST00000552341 ERVV-2B6SEH9 535 aa13.63□□□□□ -0.23
PFDN5-216ENST00000552341 MSH5O43196 834 aa13.63□□□□□ -0.23
PFDN5-216ENST00000552341 PDIA6Q15084 440 aa13.63□□□□□ -0.23
PFDN5-216ENST00000552341 RPAP2Q8IXW5 612 aaPredicted RBP13.63□□□□□ -0.23
PFDN5-216ENST00000552341 ADCY9O60503 1353 aa13.62□□□□□ -0.23
PFDN5-216ENST00000552341 NRAPQ86VF7 1730 aa13.62□□□□□ -0.23
PFDN5-216ENST00000552341 TOM1O60784 492 aa13.62□□□□□ -0.23
PFDN5-216ENST00000552341 CABP4P57796 275 aa13.62□□□□□ -0.23
PFDN5-216ENST00000552341 CHD1LQ86WJ1 897 aa13.62□□□□□ -0.23
PFDN5-216ENST00000552341 USP44Q9H0E7 712 aa13.62□□□□□ -0.23
PFDN5-216ENST00000552341 DCTPP1Q9H773 170 aa13.62□□□□□ -0.23
PFDN5-216ENST00000552341 USP35Q9P2H5 1018 aa13.62□□□□□ -0.23
PFDN5-216ENST00000552341 WNK3Q9BYP7 1800 aa13.61□□□□□ -0.23
PFDN5-216ENST00000552341 PI4KAP2A4QPH2 592 aa13.61□□□□□ -0.23
PFDN5-216ENST00000552341 PI4KAP1Q8N8J0 262 aa13.61□□□□□ -0.23
PFDN5-216ENST00000552341 PIP4K2BP78356 416 aa13.6□□□□□ -0.23
PFDN5-216ENST00000552341 BEND3Q5T5X7 828 aa13.6□□□□□ -0.23
PFDN5-216ENST00000552341 DDX54Q8TDD1 881 aaKnown RBP13.6□□□□□ -0.23
PFDN5-216ENST00000552341 DDX21Q9NR30 783 aaKnown RBP eCLIP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms