RNA–Protein interactions for RNA: ENST00000552329.1

CHPT1-209, Transcript of choline phosphotransferase 1, humanhuman

TSL 4

Gene CHPT1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-209ENST00000552329 VRTNQ9H8Y1 702 aa12.18□□□□□ -0.46
CHPT1-209ENST00000552329 PHKA2P46019 1235 aa12.17□□□□□ -0.46
CHPT1-209ENST00000552329 ATP1A2P50993 1020 aa12.17□□□□□ -0.46
CHPT1-209ENST00000552329 PTSQ03393 145 aa12.17□□□□□ -0.46
CHPT1-209ENST00000552329 CRTC2Q53ET0 693 aaPredicted RBP12.17□□□□□ -0.46
CHPT1-209ENST00000552329 KANK4Q5T7N3 995 aaPredicted RBP12.17□□□□□ -0.46
CHPT1-209ENST00000552329 LGR5O75473 907 aa12.16□□□□□ -0.46
CHPT1-209ENST00000552329 TMEM214Q6NUQ4 689 aaKnown RBP12.16□□□□□ -0.46
CHPT1-209ENST00000552329 ZSCAN10Q96SZ4 725 aaPredicted RBP12.16□□□□□ -0.46
CHPT1-209ENST00000552329 GRIP2Q9C0E4 1043 aa12.16□□□□□ -0.46
CHPT1-209ENST00000552329 ZNF358Q9NW07 568 aa12.16□□□□□ -0.46
CHPT1-209ENST00000552329 SERPINA10Q9UK55 444 aa12.16□□□□□ -0.46
CHPT1-209ENST00000552329 SFI1A8K8P3 1242 aa12.15□□□□□ -0.46
CHPT1-209ENST00000552329 LARP1Q6PKG0 1096 aaKnown RBP12.15□□□□□ -0.46
CHPT1-209ENST00000552329 HRH3Q9Y5N1 445 aa12.15□□□□□ -0.46
CHPT1-209ENST00000552329 FHDC1Q9C0D6 1143 aaPredicted RBP12.14□□□□□ -0.47
CHPT1-209ENST00000552329 GPC1P35052 558 aa12.13□□□□□ -0.47
CHPT1-209ENST00000552329 TBCELQ5QJ74 424 aa12.13□□□□□ -0.47
CHPT1-209ENST00000552329 TNS4Q8IZW8 715 aa12.13□□□□□ -0.47
CHPT1-209ENST00000552329 USP17L15C9J2P7 530 aa12.12□□□□□ -0.47
CHPT1-209ENST00000552329 USP17L10C9JJH3 530 aa12.12□□□□□ -0.47
CHPT1-209ENST00000552329 USP17L13C9JLJ4 530 aa12.12□□□□□ -0.47
CHPT1-209ENST00000552329 USP17L12C9JPN9 530 aa12.12□□□□□ -0.47
CHPT1-209ENST00000552329 USP17L11C9JVI0 530 aa12.12□□□□□ -0.47
CHPT1-209ENST00000552329 USP17L21D6R901 530 aa12.12□□□□□ -0.47
CHPT1-209ENST00000552329 USP17L18D6R9N7 530 aa12.12□□□□□ -0.47
CHPT1-209ENST00000552329 USP17L22D6RA61 530 aa12.12□□□□□ -0.47
CHPT1-209ENST00000552329 USP17L17D6RBQ6 530 aa12.12□□□□□ -0.47
CHPT1-209ENST00000552329 USP17L19D6RCP7 530 aa12.12□□□□□ -0.47
CHPT1-209ENST00000552329 USP17L20D6RJB6 530 aa12.12□□□□□ -0.47
CHPT1-209ENST00000552329 GTF2E1P29083 439 aaPredicted RBP12.12□□□□□ -0.47
CHPT1-209ENST00000552329 SMTNP53814 917 aa12.12□□□□□ -0.47
CHPT1-209ENST00000552329 USP17L24Q0WX57 530 aa12.12□□□□□ -0.47
CHPT1-209ENST00000552329 LARGE2Q8N3Y3 721 aa12.12□□□□□ -0.47
CHPT1-209ENST00000552329 NXF1Q9UBU9 619 aaKnown RBP12.12□□□□□ -0.47
CHPT1-209ENST00000552329 RBM19Q9Y4C8 960 aaKnown RBP12.12□□□□□ -0.47
CHPT1-209ENST00000552329 USP3Q9Y6I4 520 aa12.12□□□□□ -0.47
CHPT1-209ENST00000552329 DPYDQ12882 1025 aa12.11□□□□□ -0.47
CHPT1-209ENST00000552329 NBPF10Q6P3W6 841 aaKnown RBP12.11□□□□□ -0.47
CHPT1-209ENST00000552329 NBPF15Q8N660 670 aa12.11□□□□□ -0.47
CHPT1-209ENST00000552329 CCDC155Q8N6L0 562 aa12.11□□□□□ -0.47
CHPT1-209ENST00000552329 TSEN2Q8NCE0 465 aaKnown RBP12.11□□□□□ -0.47
CHPT1-209ENST00000552329 PTK7Q13308 1070 aa12.1□□□□□ -0.47
CHPT1-209ENST00000552329 SENP3-EIF4A1A0A087X0R7 540 aa12.09□□□□□ -0.47
CHPT1-209ENST00000552329 A6NJY4 79 aa12.09□□□□□ -0.47
CHPT1-209ENST00000552329 TERTO14746 1132 aaKnown RBP12.09□□□□□ -0.47
CHPT1-209ENST00000552329 BACH1O14867 736 aa12.09□□□□□ -0.47
CHPT1-209ENST00000552329 GNASQ5JWF2 1037 aa12.09□□□□□ -0.47
CHPT1-209ENST00000552329 GAS2L1Q99501 681 aaPredicted RBP12.09□□□□□ -0.47
CHPT1-209ENST00000552329 WASLO00401 505 aaPredicted RBP12.08□□□□□ -0.48
CHPT1-209ENST00000552329 PPFIA3O75145 1194 aa12.08□□□□□ -0.48
CHPT1-209ENST00000552329 C4orf17Q53FE4 359 aa12.08□□□□□ -0.48
CHPT1-209ENST00000552329 TAS1R3Q7RTX0 852 aa12.08□□□□□ -0.48
CHPT1-209ENST00000552329 GAS2L2Q8NHY3 880 aa12.08□□□□□ -0.48
CHPT1-209ENST00000552329 PARP3Q9Y6F1 533 aa12.08□□□□□ -0.48
CHPT1-209ENST00000552329 DKK1O94907 266 aa12.07□□□□□ -0.48
CHPT1-209ENST00000552329 PLA2G4AP47712 749 aa12.07□□□□□ -0.48
CHPT1-209ENST00000552329 SIX5Q8N196 739 aa12.07□□□□□ -0.48
CHPT1-209ENST00000552329 SLC4A9Q96Q91 983 aa12.07□□□□□ -0.48
CHPT1-209ENST00000552329 TIMMDC1Q9NPL8 285 aa12.07□□□□□ -0.48
CHPT1-209ENST00000552329 SLC35F4A4IF30 521 aa12.06□□□□□ -0.48
CHPT1-209ENST00000552329 SEC13P55735 322 aa12.06□□□□□ -0.48
CHPT1-209ENST00000552329 RIPOR1Q6ZS17 1223 aa12.06□□□□□ -0.48
CHPT1-209ENST00000552329 PPARGC1BQ86YN6 1023 aaKnown RBP12.06□□□□□ -0.48
CHPT1-209ENST00000552329 ANKMY2Q8IV38 441 aa12.06□□□□□ -0.48
CHPT1-209ENST00000552329 HINFPQ9BQA5 517 aa12.06□□□□□ -0.48
CHPT1-209ENST00000552329 FAM196BA6NMK8 535 aa12.05□□□□□ -0.48
CHPT1-209ENST00000552329 SPATA31C2B4DYI2 1134 aa12.05□□□□□ -0.48
CHPT1-209ENST00000552329 RHBDD1Q8TEB9 315 aa12.05□□□□□ -0.48
CHPT1-209ENST00000552329 AIDAQ96BJ3 306 aa12.05□□□□□ -0.48
CHPT1-209ENST00000552329 GPAMQ9HCL2 828 aa12.05□□□□□ -0.48
CHPT1-209ENST00000552329 CABP1Q9NZU7 370 aa12.05□□□□□ -0.48
CHPT1-209ENST00000552329 NOVA2Q9UNW9 492 aaKnown RBP12.05□□□□□ -0.48
CHPT1-209ENST00000552329 NISCHQ9Y2I1 1504 aa12.05□□□□□ -0.48
CHPT1-209ENST00000552329 TSPAN10Q9H1Z9 355 aaPredicted RBP12.04□□□□□ -0.48
CHPT1-209ENST00000552329 CDC14CA4D256 554 aa12.03□□□□□ -0.48
CHPT1-209ENST00000552329 SRPK2P78362 688 aaKnown RBP12.03□□□□□ -0.48
CHPT1-209ENST00000552329 NFX1Q12986 1120 aaKnown RBP12.03□□□□□ -0.48
CHPT1-209ENST00000552329 MTFR1Q15390 333 aa12.03□□□□□ -0.48
CHPT1-209ENST00000552329 SLC9A9Q8IVB4 645 aa12.03□□□□□ -0.48
CHPT1-209ENST00000552329 CUEDC1Q9NWM3 386 aaPredicted RBP12.03□□□□□ -0.48
CHPT1-209ENST00000552329 SCHIP1Q9P0W5 487 aaPredicted RBP12.03□□□□□ -0.48
CHPT1-209ENST00000552329 IQSEC3Q9UPP2 1182 aaPredicted RBP12.03□□□□□ -0.48
CHPT1-209ENST00000552329 H3BM21 787 aa12.02□□□□□ -0.49
CHPT1-209ENST00000552329 CDK2AP1O14519 115 aa12.02□□□□□ -0.49
CHPT1-209ENST00000552329 EPHA4P54764 986 aa12.02□□□□□ -0.49
CHPT1-209ENST00000552329 FAM200AQ8TCP9 573 aa12.02□□□□□ -0.49
CHPT1-209ENST00000552329 PBXIP1Q96AQ6 731 aa12.02□□□□□ -0.49
CHPT1-209ENST00000552329 ARXQ96QS3 562 aa12.02□□□□□ -0.49
CHPT1-209ENST00000552329 WFS1O76024 890 aa12.01□□□□□ -0.49
CHPT1-209ENST00000552329 ITGA6P23229 1130 aa12.01□□□□□ -0.49
CHPT1-209ENST00000552329 STK32AQ8WU08 396 aa12.01□□□□□ -0.49
CHPT1-209ENST00000552329 CHMP7Q8WUX9 453 aaPredicted RBP12.01□□□□□ -0.49
CHPT1-209ENST00000552329 NIFKQ9BYG3 293 aaKnown RBP12.01□□□□□ -0.49
CHPT1-209ENST00000552329 ZMIZ1Q9ULJ6 1067 aa12.01□□□□□ -0.49
CHPT1-209ENST00000552329 ERBB4Q15303 1308 aa12.01□□□□□ -0.49
CHPT1-209ENST00000552329 LCE2CQ5TA81 110 aa12□□□□□ -0.49
CHPT1-209ENST00000552329 SH3PXD2AQ5TCZ1 1133 aa12□□□□□ -0.49
CHPT1-209ENST00000552329 VWA5B2Q8N398 1253 aa12□□□□□ -0.49
CHPT1-209ENST00000552329 SLC16A10Q8TF71 515 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms