RNA–Protein interactions for RNA: ENST00000550958.5

TGIF1-216, Transcript of TGFB induced factor homeobox 1, humanhuman

TSL 3

Gene TGIF1, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGIF1-216ENST00000550958 MBIPQ9NS73 344 aa12.06□□□□□ -0.48
TGIF1-216ENST00000550958 TSPYL4Q9UJ04 414 aa12.06□□□□□ -0.48
TGIF1-216ENST00000550958 VIRMAQ69YN4 1812 aaKnown RBP12.06□□□□□ -0.48
TGIF1-216ENST00000550958 BTBD11A6QL63 1104 aa12.05□□□□□ -0.48
TGIF1-216ENST00000550958 POTEAQ6S8J7 498 aa12.05□□□□□ -0.48
TGIF1-216ENST00000550958 MIS18AQ9NYP9 233 aa12.05□□□□□ -0.48
TGIF1-216ENST00000550958 FANCIQ9NVI1 1328 aa12.05□□□□□ -0.48
TGIF1-216ENST00000550958 EXOSC9Q06265 439 aaKnown RBP12.03□□□□□ -0.48
TGIF1-216ENST00000550958 TMOD3Q9NYL9 352 aa12.03□□□□□ -0.48
TGIF1-216ENST00000550958 SIPA1L3O60292 1781 aaPredicted RBP12.02□□□□□ -0.48
TGIF1-216ENST00000550958 MRC1P22897 1456 aa12.02□□□□□ -0.48
TGIF1-216ENST00000550958 KRT27Q7Z3Y8 459 aa12.02□□□□□ -0.49
TGIF1-216ENST00000550958 CT47B1P0C2W7 299 aaPredicted RBP12.01□□□□□ -0.49
TGIF1-216ENST00000550958 PRIM1P49642 420 aaKnown RBP12.01□□□□□ -0.49
TGIF1-216ENST00000550958 ZNF790Q6PG37 636 aa12.01□□□□□ -0.49
TGIF1-216ENST00000550958 PIGBQ92521 554 aa12.01□□□□□ -0.49
TGIF1-216ENST00000550958 ACSBG1Q96GR2 724 aa12.01□□□□□ -0.49
TGIF1-216ENST00000550958 TOGARAM1Q9Y4F4 1720 aa12□□□□□ -0.49
TGIF1-216ENST00000550958 KCNQ3O43525 872 aa12□□□□□ -0.49
TGIF1-216ENST00000550958 EIF4A1P60842 406 aaKnown RBP12□□□□□ -0.49
TGIF1-216ENST00000550958 SLC39A6Q13433 755 aa12□□□□□ -0.49
TGIF1-216ENST00000550958 TTC5Q8N0Z6 440 aa12□□□□□ -0.49
TGIF1-216ENST00000550958 SYTL4Q96C24 671 aaPredicted RBP12□□□□□ -0.49
TGIF1-216ENST00000550958 BCL9O00512 1426 aa12□□□□□ -0.49
TGIF1-216ENST00000550958 KAT6BQ8WYB5 2073 aa11.99□□□□□ -0.49
TGIF1-216ENST00000550958 ELL2O00472 640 aaPredicted RBP11.99□□□□□ -0.49
TGIF1-216ENST00000550958 VAMP4O75379 141 aa11.99□□□□□ -0.49
TGIF1-216ENST00000550958 TWISTNBQ3B726 338 aaPredicted RBP11.99□□□□□ -0.49
TGIF1-216ENST00000550958 FAM182BQ5T319 152 aa11.99□□□□□ -0.49
TGIF1-216ENST00000550958 TSPYL6Q8N831 410 aa11.99□□□□□ -0.49
TGIF1-216ENST00000550958 C8orf58Q8NAV2 365 aa11.99□□□□□ -0.49
TGIF1-216ENST00000550958 DOT1LQ8TEK3 1739 aa11.99□□□□□ -0.49
TGIF1-216ENST00000550958 KDM3BQ7LBC6 1761 aa11.99□□□□□ -0.49
TGIF1-216ENST00000550958 ITGB4P16144 1822 aa11.99□□□□□ -0.49
TGIF1-216ENST00000550958 BRWD3Q6RI45 1802 aa11.99□□□□□ -0.49
TGIF1-216ENST00000550958 SOS1Q07889 1333 aaPredicted RBP11.98□□□□□ -0.49
TGIF1-216ENST00000550958 KRT24Q2M2I5 525 aa11.98□□□□□ -0.49
TGIF1-216ENST00000550958 FAM196AQ6ZSG2 479 aa11.98□□□□□ -0.49
TGIF1-216ENST00000550958 ZNF428Q96B54 188 aa11.98□□□□□ -0.49
TGIF1-216ENST00000550958 RCAN3Q9UKA8 241 aa11.98□□□□□ -0.49
TGIF1-216ENST00000550958 RGS12O14924 1447 aa11.97□□□□□ -0.49
TGIF1-216ENST00000550958 KCNQ2O43526 872 aa11.97□□□□□ -0.49
TGIF1-216ENST00000550958 FMNL2Q96PY5 1086 aa11.97□□□□□ -0.49
TGIF1-216ENST00000550958 ATG3Q9NT62 314 aa11.97□□□□□ -0.49
TGIF1-216ENST00000550958 HEG1Q9ULI3 1381 aa11.96□□□□□ -0.49
TGIF1-216ENST00000550958 HOXB7P09629 217 aa11.96□□□□□ -0.49
TGIF1-216ENST00000550958 ZNF496Q96IT1 587 aaPredicted RBP11.96□□□□□ -0.49
TGIF1-216ENST00000550958 CHMP4AQ9BY43 222 aa11.96□□□□□ -0.49
TGIF1-216ENST00000550958 ASAP1Q9ULH1 1129 aa11.96□□□□□ -0.49
TGIF1-216ENST00000550958 GIGYF1O75420 1035 aaPredicted RBP11.95□□□□□ -0.5
TGIF1-216ENST00000550958 RARSP54136 660 aaKnown RBP11.95□□□□□ -0.5
TGIF1-216ENST00000550958 ALDH1L2Q3SY69 923 aa11.95□□□□□ -0.5
TGIF1-216ENST00000550958 SMARCC1Q92922 1105 aaPredicted RBP11.95□□□□□ -0.5
TGIF1-216ENST00000550958 PAPPAQ13219 1627 aa11.94□□□□□ -0.5
TGIF1-216ENST00000550958 PTCD1O75127 700 aaKnown RBP11.94□□□□□ -0.5
TGIF1-216ENST00000550958 SNRPA1P09661 255 aaKnown RBP11.94□□□□□ -0.5
TGIF1-216ENST00000550958 RBM42Q9BTD8 480 aaKnown RBP11.94□□□□□ -0.5
TGIF1-216ENST00000550958 BCL11BQ9C0K0 894 aaPredicted RBP11.94□□□□□ -0.5
TGIF1-216ENST00000550958 SUPT16HQ9Y5B9 1047 aaKnown RBP11.94□□□□□ -0.5
TGIF1-216ENST00000550958 SBF2Q86WG5 1849 aa11.93□□□□□ -0.5
TGIF1-216ENST00000550958 CCDC30Q5VVM6 783 aa11.93□□□□□ -0.5
TGIF1-216ENST00000550958 VSIG10Q8N0Z9 540 aa11.93□□□□□ -0.5
TGIF1-216ENST00000550958 SSH1Q8WYL5 1049 aa11.93□□□□□ -0.5
TGIF1-216ENST00000550958 NHSQ6T4R5 1651 aa11.93□□□□□ -0.5
TGIF1-216ENST00000550958 UBR2Q8IWV8 1755 aa11.92□□□□□ -0.5
TGIF1-216ENST00000550958 KCPQ6ZWJ8 1503 aa11.92□□□□□ -0.5
TGIF1-216ENST00000550958 PRAMEF22A3QJZ6 481 aa11.92□□□□□ -0.5
TGIF1-216ENST00000550958 BCAR3O75815 825 aa11.92□□□□□ -0.5
TGIF1-216ENST00000550958 EIF2S2P20042 333 aaKnown RBP11.92□□□□□ -0.5
TGIF1-216ENST00000550958 HDGFL1Q5TGJ6 251 aa11.92□□□□□ -0.5
TGIF1-216ENST00000550958 PTF1AQ7RTS3 328 aa11.92□□□□□ -0.5
TGIF1-216ENST00000550958 TEX13AQ9BXU3 409 aaPredicted RBP11.92□□□□□ -0.5
TGIF1-216ENST00000550958 SMC4Q9NTJ3 1288 aa11.92□□□□□ -0.5
TGIF1-216ENST00000550958 USP16Q9Y5T5 823 aa11.92□□□□□ -0.5
TGIF1-216ENST00000550958 TCERG1O14776 1098 aaKnown RBP11.91□□□□□ -0.5
TGIF1-216ENST00000550958 TRIM37O94972 964 aa11.91□□□□□ -0.5
TGIF1-216ENST00000550958 BRPF1P55201 1214 aaPredicted RBP11.91□□□□□ -0.5
TGIF1-216ENST00000550958 MRPL50Q8N5N7 158 aaKnown RBP11.91□□□□□ -0.5
TGIF1-216ENST00000550958 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.91□□□□□ -0.5
TGIF1-216ENST00000550958 BCL2L13Q9BXK5 485 aa11.91□□□□□ -0.5
TGIF1-216ENST00000550958 STK31Q9BXU1 1019 aa11.91□□□□□ -0.5
TGIF1-216ENST00000550958 PALLDQ8WX93 1383 aa11.91□□□□□ -0.5
TGIF1-216ENST00000550958 LOC102724428A0A0B4J2F2 783 aa11.9□□□□□ -0.5
TGIF1-216ENST00000550958 SLC4A2P04920 1241 aa11.9□□□□□ -0.5
TGIF1-216ENST00000550958 SIK1P57059 783 aa11.9□□□□□ -0.5
TGIF1-216ENST00000550958 NECTIN2Q92692 538 aa11.9□□□□□ -0.5
TGIF1-216ENST00000550958 BTAF1O14981 1849 aa11.9□□□□□ -0.5
TGIF1-216ENST00000550958 RNF123Q5XPI4 1314 aa11.89□□□□□ -0.51
TGIF1-216ENST00000550958 ATP6V1AP38606 617 aa11.89□□□□□ -0.51
TGIF1-216ENST00000550958 DNAJC10Q8IXB1 793 aa11.89□□□□□ -0.51
TGIF1-216ENST00000550958 SLC4A9Q96Q91 983 aa11.89□□□□□ -0.51
TGIF1-216ENST00000550958 IPO8O15397 1037 aaKnown RBP11.88□□□□□ -0.51
TGIF1-216ENST00000550958 STARD3NLO95772 234 aa11.88□□□□□ -0.51
TGIF1-216ENST00000550958 RRP1P56182 461 aaKnown RBP11.88□□□□□ -0.51
TGIF1-216ENST00000550958 FRAT1Q92837 279 aaPredicted RBP11.88□□□□□ -0.51
TGIF1-216ENST00000550958 CHPF2Q9P2E5 772 aa11.88□□□□□ -0.51
TGIF1-216ENST00000550958 DBF4Q9UBU7 674 aaPredicted RBP11.88□□□□□ -0.51
TGIF1-216ENST00000550958 C5P01031 1676 aa11.87□□□□□ -0.51
TGIF1-216ENST00000550958 ERBB4Q15303 1308 aa11.87□□□□□ -0.51
TGIF1-216ENST00000550958 KIF16BQ96L93 1317 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms