RNA–Protein interactions for RNA: ENST00000550795.1

PXN-217, Transcript of paxillin, humanhuman

TSL 3

Gene PXN, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-217ENST00000550795 ZNF831Q5JPB2 1677 aa32.87■■■□□ 2.85
PXN-217ENST00000550795 COL5A3P25940 1745 aaPredicted RBP32.86■■■□□ 2.85
PXN-217ENST00000550795 LOC102724428A0A0B4J2F2 783 aa32.85■■■□□ 2.85
PXN-217ENST00000550795 POLD1P28340 1107 aa32.85■■■□□ 2.85
PXN-217ENST00000550795 SIK1P57059 783 aa32.85■■■□□ 2.85
PXN-217ENST00000550795 MSL1Q68DK7 614 aa32.83■■■□□ 2.85
PXN-217ENST00000550795 VIRMAQ69YN4 1812 aaKnown RBP32.82■■■□□ 2.84
PXN-217ENST00000550795 U2SURPO15042 1029 aaKnown RBP32.82■■■□□ 2.84
PXN-217ENST00000550795 CABP4P57796 275 aa32.82■■■□□ 2.84
PXN-217ENST00000550795 GOLGB1Q14789 3259 aaKnown RBP32.82■■■□□ 2.84
PXN-217ENST00000550795 PPP2R1AP30153 589 aa32.81■■■□□ 2.84
PXN-217ENST00000550795 KLHL34Q8N239 644 aa32.81■■■□□ 2.84
PXN-217ENST00000550795 NLGN2Q8NFZ4 835 aa32.81■■■□□ 2.84
PXN-217ENST00000550795 MSH5O43196 834 aa32.8■■■□□ 2.84
PXN-217ENST00000550795 ITPK1Q13572 414 aa32.8■■■□□ 2.84
PXN-217ENST00000550795 SMIM5Q71RC9 77 aa32.8■■■□□ 2.84
PXN-217ENST00000550795 LINC00116Q8NCU8 138 aa32.8■■■□□ 2.84
PXN-217ENST00000550795 SCN11AQ9UI33 1791 aa32.8■■■□□ 2.84
PXN-217ENST00000550795 ATP6V1AP38606 617 aa32.78■■■□□ 2.84
PXN-217ENST00000550795 MTHFSDQ2M296 383 aaKnown RBP32.78■■■□□ 2.84
PXN-217ENST00000550795 AKAP4Q5JQC9 854 aa32.78■■■□□ 2.84
PXN-217ENST00000550795 NFATC2IPQ8NCF5 419 aa32.78■■■□□ 2.84
PXN-217ENST00000550795 HMGB2P26583 209 aaKnown RBP32.76■■■□□ 2.83
PXN-217ENST00000550795 AK7Q96M32 723 aa32.76■■■□□ 2.83
PXN-217ENST00000550795 SLC4A9Q96Q91 983 aa32.76■■■□□ 2.83
PXN-217ENST00000550795 LGR6Q9HBX8 967 aa32.76■■■□□ 2.83
PXN-217ENST00000550795 CFAP53Q96M91 514 aa32.75■■■□□ 2.83
PXN-217ENST00000550795 RBM42Q9BTD8 480 aaKnown RBP32.75■■■□□ 2.83
PXN-217ENST00000550795 CICQ96RK0 1608 aaPredicted RBP32.74■■■□□ 2.83
PXN-217ENST00000550795 FLAD1Q8NFF5 587 aa32.73■■■□□ 2.83
PXN-217ENST00000550795 TJP1Q07157 1748 aa32.73■■■□□ 2.83
PXN-217ENST00000550795 C4AP0C0L4 1744 aa32.72■■■□□ 2.83
PXN-217ENST00000550795 MYH14Q7Z406 1995 aaKnown RBP32.72■■■□□ 2.83
PXN-217ENST00000550795 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.71■■■□□ 2.83
PXN-217ENST00000550795 PHF14O94880 888 aa32.71■■■□□ 2.83
PXN-217ENST00000550795 RNMTO43148 476 aaKnown RBP32.7■■■□□ 2.83
PXN-217ENST00000550795 PTCD1O75127 700 aaKnown RBP32.68■■■□□ 2.82
PXN-217ENST00000550795 ADAMTS7Q9UKP4 1686 aa32.68■■■□□ 2.82
PXN-217ENST00000550795 SSFA2P28290 1259 aa32.67■■■□□ 2.82
PXN-217ENST00000550795 GPR162Q16538 588 aa32.67■■■□□ 2.82
PXN-217ENST00000550795 ZNF784Q8NCA9 323 aaPredicted RBP32.67■■■□□ 2.82
PXN-217ENST00000550795 SLC52A2Q9HAB3 445 aa32.67■■■□□ 2.82
PXN-217ENST00000550795 KIAA1551Q9HCM1 1747 aa32.65■■■□□ 2.82
PXN-217ENST00000550795 GNPATO15228 680 aa32.65■■■□□ 2.82
PXN-217ENST00000550795 RSPH6AQ9H0K4 717 aa32.65■■■□□ 2.82
PXN-217ENST00000550795 NUDCQ9Y266 331 aa32.65■■■□□ 2.82
PXN-217ENST00000550795 KIF13BQ9NQT8 1826 aa32.65■■■□□ 2.82
PXN-217ENST00000550795 YBX3P16989 372 aaKnown RBP eCLIP32.64■■■□□ 2.82
PXN-217ENST00000550795 PRKAR2BP31323 418 aa32.64■■■□□ 2.82
PXN-217ENST00000550795 PHACTR3Q96KR7 559 aa32.64■■■□□ 2.82
PXN-217ENST00000550795 MRC1P22897 1456 aa32.63■■■□□ 2.81
PXN-217ENST00000550795 DDX10Q13206 875 aaKnown RBP32.63■■■□□ 2.81
PXN-217ENST00000550795 U2AF1L5P0DN76 240 aaPredicted RBP32.62■■■□□ 2.81
PXN-217ENST00000550795 U2AF1Q01081 240 aaKnown RBP eCLIP32.62■■■□□ 2.81
PXN-217ENST00000550795 PELP1Q8IZL8 1130 aaKnown RBP32.61■■■□□ 2.81
PXN-217ENST00000550795 SLC39A6Q13433 755 aa32.6■■■□□ 2.81
PXN-217ENST00000550795 GAS2L2Q8NHY3 880 aa32.6■■■□□ 2.81
PXN-217ENST00000550795 IL17REQ8NFR9 667 aa32.58■■■□□ 2.81
PXN-217ENST00000550795 CD2APQ9Y5K6 639 aa32.58■■■□□ 2.81
PXN-217ENST00000550795 GNAT3A8MTJ3 354 aa32.57■■■□□ 2.8
PXN-217ENST00000550795 RC3H1Q5TC82 1133 aaKnown RBP32.57■■■□□ 2.8
PXN-217ENST00000550795 CNTNAP4Q9C0A0 1308 aa32.56■■■□□ 2.8
PXN-217ENST00000550795 RTCBQ9Y3I0 505 aaKnown RBP32.56■■■□□ 2.8
PXN-217ENST00000550795 FCHSD2O94868 740 aa32.54■■■□□ 2.8
PXN-217ENST00000550795 UBR2Q8IWV8 1755 aa32.54■■■□□ 2.8
PXN-217ENST00000550795 N4BP2Q86UW6 1770 aaPredicted RBP32.53■■■□□ 2.8
PXN-217ENST00000550795 RPS6KA4O75676 772 aa32.52■■■□□ 2.8
PXN-217ENST00000550795 CRKLP46109 303 aaKnown RBP32.52■■■□□ 2.8
PXN-217ENST00000550795 TRAPPC3LQ5T215 181 aa32.52■■■□□ 2.8
PXN-217ENST00000550795 KCPQ6ZWJ8 1503 aa32.51■■■□□ 2.8
PXN-217ENST00000550795 DNAJC10Q8IXB1 793 aa32.51■■■□□ 2.79
PXN-217ENST00000550795 ARHGEF1Q92888 912 aaKnown RBP32.5■■■□□ 2.79
PXN-217ENST00000550795 BRCA1P38398 1863 aaKnown RBP32.5■■■□□ 2.79
PXN-217ENST00000550795 SIPA1L3O60292 1781 aaPredicted RBP32.5■■■□□ 2.79
PXN-217ENST00000550795 TEFQ10587 303 aa32.49■■■□□ 2.79
PXN-217ENST00000550795 RALBP1Q15311 655 aa32.47■■■□□ 2.79
PXN-217ENST00000550795 INTS5Q6P9B9 1019 aaKnown RBP32.47■■■□□ 2.79
PXN-217ENST00000550795 C10orf71Q711Q0 1435 aa32.46■■■□□ 2.79
PXN-217ENST00000550795 MMP10P09238 476 aa32.46■■■□□ 2.79
PXN-217ENST00000550795 PXDNLA1KZ92 1463 aa32.46■■■□□ 2.79
PXN-217ENST00000550795 CEMIPQ8WUJ3 1361 aa32.45■■■□□ 2.79
PXN-217ENST00000550795 ADRA2BP18089 450 aa32.45■■■□□ 2.79
PXN-217ENST00000550795 GRIN3BO60391 1043 aa32.44■■■□□ 2.78
PXN-217ENST00000550795 CYP19A1P11511 503 aaPredicted RBP32.43■■■□□ 2.78
PXN-217ENST00000550795 RFC4P35249 363 aa32.43■■■□□ 2.78
PXN-217ENST00000550795 GYS1P13807 737 aa32.42■■■□□ 2.78
PXN-217ENST00000550795 TTC5Q8N0Z6 440 aa32.42■■■□□ 2.78
PXN-217ENST00000550795 CCDC87Q9NVE4 849 aa32.42■■■□□ 2.78
PXN-217ENST00000550795 WWC3Q9ULE0 1092 aa32.42■■■□□ 2.78
PXN-217ENST00000550795 ZNF790Q6PG37 636 aa32.41■■■□□ 2.78
PXN-217ENST00000550795 MCM10Q7L590 875 aa32.41■■■□□ 2.78
PXN-217ENST00000550795 VSIG10Q8N0Z9 540 aa32.4■■■□□ 2.78
PXN-217ENST00000550795 ZNF496Q96IT1 587 aaPredicted RBP32.4■■■□□ 2.78
PXN-217ENST00000550795 DCTN1Q14203 1278 aa32.39■■■□□ 2.78
PXN-217ENST00000550795 ADCY9O60503 1353 aa32.39■■■□□ 2.78
PXN-217ENST00000550795 KCNQ3O43525 872 aa32.38■■■□□ 2.77
PXN-217ENST00000550795 ZEB1P37275 1124 aaPredicted RBP32.38■■■□□ 2.77
PXN-217ENST00000550795 NLGN1Q8N2Q7 840 aa32.38■■■□□ 2.77
PXN-217ENST00000550795 RTF1Q92541 710 aaKnown RBP32.38■■■□□ 2.77
PXN-217ENST00000550795 PLEKHF1Q96S99 279 aa32.38■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms