RNA–Protein interactions for RNA: ENST00000550755.5

LETMD1-226, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 552 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-226ENST00000550755 CCDC155Q8N6L0 562 aa10.65□□□□□ -0.7
LETMD1-226ENST00000550755 SPATA31C2B4DYI2 1134 aa10.64□□□□□ -0.71
LETMD1-226ENST00000550755 NFX1Q12986 1120 aaKnown RBP10.64□□□□□ -0.71
LETMD1-226ENST00000550755 WDR44Q5JSH3 913 aa10.64□□□□□ -0.71
LETMD1-226ENST00000550755 NBPF10Q6P3W6 841 aaKnown RBP10.64□□□□□ -0.71
LETMD1-226ENST00000550755 LARGE2Q8N3Y3 721 aa10.64□□□□□ -0.71
LETMD1-226ENST00000550755 NBPF15Q8N660 670 aa10.64□□□□□ -0.71
LETMD1-226ENST00000550755 IRF7Q92985 503 aa10.64□□□□□ -0.71
LETMD1-226ENST00000550755 CCDC97Q96F63 343 aaPredicted RBP10.64□□□□□ -0.71
LETMD1-226ENST00000550755 HRH3Q9Y5N1 445 aa10.64□□□□□ -0.71
LETMD1-226ENST00000550755 SLC35F4A4IF30 521 aa10.63□□□□□ -0.71
LETMD1-226ENST00000550755 TMEM229AB2RXF0 380 aa10.63□□□□□ -0.71
LETMD1-226ENST00000550755 RASA1P20936 1047 aa10.63□□□□□ -0.71
LETMD1-226ENST00000550755 SMTNP53814 917 aa10.63□□□□□ -0.71
LETMD1-226ENST00000550755 CCDC102BQ68D86 513 aa10.63□□□□□ -0.71
LETMD1-226ENST00000550755 LARP1Q6PKG0 1096 aaKnown RBP10.63□□□□□ -0.71
LETMD1-226ENST00000550755 TPCN2Q8NHX9 752 aa10.63□□□□□ -0.71
LETMD1-226ENST00000550755 FHDC1Q9C0D6 1143 aaPredicted RBP10.63□□□□□ -0.71
LETMD1-226ENST00000550755 VRTNQ9H8Y1 702 aa10.63□□□□□ -0.71
LETMD1-226ENST00000550755 TIMMDC1Q9NPL8 285 aa10.62□□□□□ -0.71
LETMD1-226ENST00000550755 CLDN10P78369 228 aa10.61□□□□□ -0.71
LETMD1-226ENST00000550755 PPARGC1BQ86YN6 1023 aaKnown RBP10.61□□□□□ -0.71
LETMD1-226ENST00000550755 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.61□□□□□ -0.71
LETMD1-226ENST00000550755 ZNF594Q96JF6 807 aaPredicted RBP10.61□□□□□ -0.71
LETMD1-226ENST00000550755 SLC4A9Q96Q91 983 aa10.61□□□□□ -0.71
LETMD1-226ENST00000550755 SENP3-EIF4A1A0A087X0R7 540 aa10.6□□□□□ -0.71
LETMD1-226ENST00000550755 A6NJY4 79 aa10.6□□□□□ -0.71
LETMD1-226ENST00000550755 ITGA6P23229 1130 aa10.6□□□□□ -0.71
LETMD1-226ENST00000550755 RHBDD1Q8TEB9 315 aa10.6□□□□□ -0.71
LETMD1-226ENST00000550755 ZNF358Q9NW07 568 aa10.6□□□□□ -0.71
LETMD1-226ENST00000550755 SERPINA10Q9UK55 444 aa10.6□□□□□ -0.71
LETMD1-226ENST00000550755 DYRK1BQ9Y463 629 aa10.6□□□□□ -0.71
LETMD1-226ENST00000550755 ARID3CA6NKF2 412 aa10.59□□□□□ -0.71
LETMD1-226ENST00000550755 ZBTB7BO15156 539 aaPredicted RBP10.59□□□□□ -0.71
LETMD1-226ENST00000550755 RFX1P22670 979 aa10.59□□□□□ -0.71
LETMD1-226ENST00000550755 PHKA2P46019 1235 aa10.59□□□□□ -0.71
LETMD1-226ENST00000550755 CFAP70Q5T0N1 1121 aa10.59□□□□□ -0.71
LETMD1-226ENST00000550755 GAS2L1Q99501 681 aaPredicted RBP10.59□□□□□ -0.71
LETMD1-226ENST00000550755 RIPOR1Q6ZS17 1223 aa10.58□□□□□ -0.72
LETMD1-226ENST00000550755 SIX5Q8N196 739 aa10.58□□□□□ -0.72
LETMD1-226ENST00000550755 NIFKQ9BYG3 293 aaKnown RBP10.58□□□□□ -0.72
LETMD1-226ENST00000550755 KIAA1024Q9UPX6 916 aa10.58□□□□□ -0.72
LETMD1-226ENST00000550755 CDC14CA4D256 554 aa10.57□□□□□ -0.72
LETMD1-226ENST00000550755 CDK2AP1O14519 115 aa10.57□□□□□ -0.72
LETMD1-226ENST00000550755 C4orf17Q53FE4 359 aa10.57□□□□□ -0.72
LETMD1-226ENST00000550755 KANK4Q5T7N3 995 aaPredicted RBP10.57□□□□□ -0.72
LETMD1-226ENST00000550755 A0A1B0GTH6 734 aa10.56□□□□□ -0.72
LETMD1-226ENST00000550755 MTFR1Q15390 333 aa10.56□□□□□ -0.72
LETMD1-226ENST00000550755 FAM196BA6NMK8 535 aa10.55□□□□□ -0.72
LETMD1-226ENST00000550755 H7C1W4 665 aa10.55□□□□□ -0.72
LETMD1-226ENST00000550755 F11P03951 625 aa10.55□□□□□ -0.72
LETMD1-226ENST00000550755 SEC13P55735 322 aa10.55□□□□□ -0.72
LETMD1-226ENST00000550755 SV2AQ7L0J3 742 aa10.55□□□□□ -0.72
LETMD1-226ENST00000550755 CABP1Q9NZU7 370 aa10.55□□□□□ -0.72
LETMD1-226ENST00000550755 M0R2N6 131 aa10.54□□□□□ -0.72
LETMD1-226ENST00000550755 VSIG8P0DPA2 414 aa10.54□□□□□ -0.72
LETMD1-226ENST00000550755 PLA2G4AP47712 749 aa10.54□□□□□ -0.72
LETMD1-226ENST00000550755 VWA5B2Q8N398 1253 aa10.54□□□□□ -0.72
LETMD1-226ENST00000550755 NANOS1Q8WY41 292 aaKnown RBP10.54□□□□□ -0.72
LETMD1-226ENST00000550755 GMCL1Q96IK5 515 aa10.54□□□□□ -0.72
LETMD1-226ENST00000550755 SCHIP1Q9P0W5 487 aaPredicted RBP10.54□□□□□ -0.72
LETMD1-226ENST00000550755 SFI1A8K8P3 1242 aa10.53□□□□□ -0.72
LETMD1-226ENST00000550755 USP17L15C9J2P7 530 aa10.53□□□□□ -0.72
LETMD1-226ENST00000550755 USP17L10C9JJH3 530 aa10.53□□□□□ -0.72
LETMD1-226ENST00000550755 USP17L13C9JLJ4 530 aa10.53□□□□□ -0.72
LETMD1-226ENST00000550755 USP17L12C9JPN9 530 aa10.53□□□□□ -0.72
LETMD1-226ENST00000550755 USP17L11C9JVI0 530 aa10.53□□□□□ -0.72
LETMD1-226ENST00000550755 USP17L21D6R901 530 aa10.53□□□□□ -0.72
LETMD1-226ENST00000550755 USP17L18D6R9N7 530 aa10.53□□□□□ -0.72
LETMD1-226ENST00000550755 USP17L22D6RA61 530 aa10.53□□□□□ -0.72
LETMD1-226ENST00000550755 USP17L17D6RBQ6 530 aa10.53□□□□□ -0.72
LETMD1-226ENST00000550755 USP17L19D6RCP7 530 aa10.53□□□□□ -0.72
LETMD1-226ENST00000550755 USP17L20D6RJB6 530 aa10.53□□□□□ -0.72
LETMD1-226ENST00000550755 CSB-PGBD3P0DP91 1061 aa10.53□□□□□ -0.72
LETMD1-226ENST00000550755 USP17L24Q0WX57 530 aa10.53□□□□□ -0.72
LETMD1-226ENST00000550755 PTK7Q13308 1070 aa10.53□□□□□ -0.72
LETMD1-226ENST00000550755 CRTC2Q53ET0 693 aaPredicted RBP10.53□□□□□ -0.72
LETMD1-226ENST00000550755 FOXR1Q6PIV2 292 aa10.53□□□□□ -0.72
LETMD1-226ENST00000550755 TNS4Q8IZW8 715 aa10.53□□□□□ -0.72
LETMD1-226ENST00000550755 PGBD3Q8N328 593 aa10.53□□□□□ -0.72
LETMD1-226ENST00000550755 AIDAQ96BJ3 306 aa10.53□□□□□ -0.72
LETMD1-226ENST00000550755 CHMP3Q9Y3E7 222 aa10.53□□□□□ -0.72
LETMD1-226ENST00000550755 ERBB4Q15303 1308 aa10.53□□□□□ -0.72
LETMD1-226ENST00000550755 NBPF1Q3BBV0 1214 aa10.52□□□□□ -0.73
LETMD1-226ENST00000550755 CDCA8Q53HL2 280 aa10.52□□□□□ -0.73
LETMD1-226ENST00000550755 LCE2AQ5TA79 106 aaPredicted RBP10.52□□□□□ -0.73
LETMD1-226ENST00000550755 ANKMY2Q8IV38 441 aa10.52□□□□□ -0.73
LETMD1-226ENST00000550755 TRIM22Q8IYM9 498 aa10.52□□□□□ -0.73
LETMD1-226ENST00000550755 GPAMQ9HCL2 828 aa10.52□□□□□ -0.73
LETMD1-226ENST00000550755 IQSEC3Q9UPP2 1182 aaPredicted RBP10.52□□□□□ -0.73
LETMD1-226ENST00000550755 DPYDQ12882 1025 aa10.51□□□□□ -0.73
LETMD1-226ENST00000550755 HINFPQ9BQA5 517 aa10.51□□□□□ -0.73
LETMD1-226ENST00000550755 GMPRP36959 345 aa10.5□□□□□ -0.73
LETMD1-226ENST00000550755 SLC9A9Q8IVB4 645 aa10.5□□□□□ -0.73
LETMD1-226ENST00000550755 TSEN2Q8NCE0 465 aaKnown RBP10.5□□□□□ -0.73
LETMD1-226ENST00000550755 TATP17735 454 aaPredicted RBP10.49□□□□□ -0.73
LETMD1-226ENST00000550755 MSX1P28360 303 aa10.49□□□□□ -0.73
LETMD1-226ENST00000550755 EPHA4P54764 986 aa10.49□□□□□ -0.73
LETMD1-226ENST00000550755 CCDC82Q8N4S0 544 aa10.49□□□□□ -0.73
LETMD1-226ENST00000550755 C1orf216Q8TAB5 229 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms