RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 RIMS1Q86UR5 1692 aaKnown RBP11.3□□□□□ -0.6
UBE2N-205ENST00000550657 ERC2O15083 957 aa11.3□□□□□ -0.6
UBE2N-205ENST00000550657 REC8O95072 547 aa11.3□□□□□ -0.6
UBE2N-205ENST00000550657 MCTP1Q6DN14 999 aa11.3□□□□□ -0.6
UBE2N-205ENST00000550657 FAM43AQ8N2R8 423 aa11.3□□□□□ -0.6
UBE2N-205ENST00000550657 LRRCC1Q9C099 1032 aa11.3□□□□□ -0.6
UBE2N-205ENST00000550657 RRAGDQ9NQL2 400 aaPredicted RBP11.3□□□□□ -0.6
UBE2N-205ENST00000550657 MAP4K4O95819 1239 aaPredicted RBP11.3□□□□□ -0.6
UBE2N-205ENST00000550657 ANXA1P04083 346 aa11.3□□□□□ -0.6
UBE2N-205ENST00000550657 GRPEL1Q9HAV7 217 aa11.3□□□□□ -0.6
UBE2N-205ENST00000550657 NRKQ7Z2Y5 1582 aa11.29□□□□□ -0.6
UBE2N-205ENST00000550657 GOLGA6L22H0YM25 854 aa11.29□□□□□ -0.6
UBE2N-205ENST00000550657 ST18O60284 1047 aa11.29□□□□□ -0.6
UBE2N-205ENST00000550657 TAF7Q15545 349 aaPredicted RBP11.29□□□□□ -0.6
UBE2N-205ENST00000550657 DDX49Q9Y6V7 483 aaKnown RBP11.29□□□□□ -0.6
UBE2N-205ENST00000550657 GNAI3P08754 354 aa11.29□□□□□ -0.6
UBE2N-205ENST00000550657 GAS2L3Q86XJ1 694 aa11.29□□□□□ -0.6
UBE2N-205ENST00000550657 CHAMP1Q96JM3 812 aa11.29□□□□□ -0.6
UBE2N-205ENST00000550657 ANO2Q9NQ90 1003 aa11.29□□□□□ -0.6
UBE2N-205ENST00000550657 KDRP35968 1356 aa11.28□□□□□ -0.6
UBE2N-205ENST00000550657 UBTFL1P0CB47 393 aaPredicted RBP11.28□□□□□ -0.6
UBE2N-205ENST00000550657 TRHP20396 242 aaPredicted RBP11.28□□□□□ -0.6
UBE2N-205ENST00000550657 MRE11P49959 708 aa11.28□□□□□ -0.6
UBE2N-205ENST00000550657 ESCO1Q5FWF5 840 aa11.28□□□□□ -0.6
UBE2N-205ENST00000550657 NUTM1Q86Y26 1132 aa11.28□□□□□ -0.6
UBE2N-205ENST00000550657 LGR6Q9HBX8 967 aa11.28□□□□□ -0.6
UBE2N-205ENST00000550657 BAG4O95429 457 aaKnown RBP11.28□□□□□ -0.6
UBE2N-205ENST00000550657 MX1P20591 662 aa11.28□□□□□ -0.6
UBE2N-205ENST00000550657 NEK4P51957 841 aa11.28□□□□□ -0.6
UBE2N-205ENST00000550657 LRRC59Q96AG4 307 aaKnown RBP11.28□□□□□ -0.6
UBE2N-205ENST00000550657 MAP3K5Q99683 1374 aa11.28□□□□□ -0.6
UBE2N-205ENST00000550657 PSME1Q06323 249 aa11.27□□□□□ -0.6
UBE2N-205ENST00000550657 PHF8Q9UPP1 1060 aa11.27□□□□□ -0.6
UBE2N-205ENST00000550657 FER1L4A9Z1Z3 1794 aa11.27□□□□□ -0.61
UBE2N-205ENST00000550657 KCNQ3O43525 872 aa11.27□□□□□ -0.61
UBE2N-205ENST00000550657 ATP8B2P98198 1209 aa11.27□□□□□ -0.61
UBE2N-205ENST00000550657 NBPF6Q5VWK0 638 aa11.27□□□□□ -0.61
UBE2N-205ENST00000550657 NBPF4Q96M43 638 aa11.27□□□□□ -0.61
UBE2N-205ENST00000550657 SURF6O75683 361 aaKnown RBP11.26□□□□□ -0.61
UBE2N-205ENST00000550657 UNC5CLQ8IV45 518 aa11.26□□□□□ -0.61
UBE2N-205ENST00000550657 USP44Q9H0E7 712 aa11.26□□□□□ -0.61
UBE2N-205ENST00000550657 TOPAZ1Q8N9V7 1692 aa11.26□□□□□ -0.61
UBE2N-205ENST00000550657 DIP2AQ14689 1571 aa11.26□□□□□ -0.61
UBE2N-205ENST00000550657 FOXD4L6Q3SYB3 417 aaPredicted RBP11.26□□□□□ -0.61
UBE2N-205ENST00000550657 FOXD4L3Q6VB84 417 aaPredicted RBP11.26□□□□□ -0.61
UBE2N-205ENST00000550657 MPRIPQ6WCQ1 1025 aa11.26□□□□□ -0.61
UBE2N-205ENST00000550657 HTATSF1O43719 755 aaKnown RBP11.25□□□□□ -0.61
UBE2N-205ENST00000550657 SKOR2Q2VWA4 1001 aaPredicted RBP11.25□□□□□ -0.61
UBE2N-205ENST00000550657 CHPF2Q9P2E5 772 aa11.25□□□□□ -0.61
UBE2N-205ENST00000550657 ESYT1Q9BSJ8 1104 aa11.25□□□□□ -0.61
UBE2N-205ENST00000550657 PALD1Q9ULE6 856 aa11.25□□□□□ -0.61
UBE2N-205ENST00000550657 CAVIN1Q6NZI2 390 aaKnown RBP11.25□□□□□ -0.61
UBE2N-205ENST00000550657 PPP1R42Q7Z4L9 355 aa11.25□□□□□ -0.61
UBE2N-205ENST00000550657 UPF3BQ9BZI7 483 aaKnown RBP11.25□□□□□ -0.61
UBE2N-205ENST00000550657 SRGAP3O43295 1099 aa11.24□□□□□ -0.61
UBE2N-205ENST00000550657 PRPF40AO75400 957 aaKnown RBP11.24□□□□□ -0.61
UBE2N-205ENST00000550657 NUCB2P80303 420 aa11.24□□□□□ -0.61
UBE2N-205ENST00000550657 TEFQ10587 303 aa11.24□□□□□ -0.61
UBE2N-205ENST00000550657 TPRNQ4KMQ1 711 aa11.24□□□□□ -0.61
UBE2N-205ENST00000550657 ZNF530Q6P9A1 599 aaPredicted RBP11.24□□□□□ -0.61
UBE2N-205ENST00000550657 SRCIN1Q9C0H9 1055 aa11.24□□□□□ -0.61
UBE2N-205ENST00000550657 SLIT1O75093 1534 aa11.24□□□□□ -0.61
UBE2N-205ENST00000550657 PI4KAP2A4QPH2 592 aa11.24□□□□□ -0.61
UBE2N-205ENST00000550657 NBPF7P0C2Y1 421 aaPredicted RBP11.24□□□□□ -0.61
UBE2N-205ENST00000550657 PI4KAP1Q8N8J0 262 aa11.24□□□□□ -0.61
UBE2N-205ENST00000550657 OSBPL3Q9H4L5 887 aa11.24□□□□□ -0.61
UBE2N-205ENST00000550657 OS9Q13438 667 aaPredicted RBP11.23□□□□□ -0.61
UBE2N-205ENST00000550657 ARHGAP23Q9P227 1491 aa11.23□□□□□ -0.61
UBE2N-205ENST00000550657 CHMLP26374 656 aa11.23□□□□□ -0.61
UBE2N-205ENST00000550657 IBTKQ9P2D0 1353 aaPredicted RBP11.22□□□□□ -0.61
UBE2N-205ENST00000550657 BTBD11A6QL63 1104 aa11.22□□□□□ -0.61
UBE2N-205ENST00000550657 MCCP23508 829 aa11.22□□□□□ -0.61
UBE2N-205ENST00000550657 TRIM44Q96DX7 344 aaPredicted RBP11.22□□□□□ -0.61
UBE2N-205ENST00000550657 TMX3Q96JJ7 454 aa11.22□□□□□ -0.61
UBE2N-205ENST00000550657 IP6K1Q92551 441 aa11.22□□□□□ -0.61
UBE2N-205ENST00000550657 IL25Q9H293 177 aa11.22□□□□□ -0.61
UBE2N-205ENST00000550657 RGPD1P0DJD0 1748 aa11.22□□□□□ -0.61
UBE2N-205ENST00000550657 PTMSP20962 102 aa11.22□□□□□ -0.61
UBE2N-205ENST00000550657 EIF4A1P60842 406 aaKnown RBP11.22□□□□□ -0.61
UBE2N-205ENST00000550657 LARP6Q9BRS8 491 aaKnown RBP11.22□□□□□ -0.61
UBE2N-205ENST00000550657 RBM27Q9P2N5 1060 aaKnown RBP11.22□□□□□ -0.61
UBE2N-205ENST00000550657 ORAI2Q96SN7 254 aa11.21□□□□□ -0.61
UBE2N-205ENST00000550657 PIK3C2AO00443 1686 aa11.21□□□□□ -0.61
UBE2N-205ENST00000550657 RGPD8O14715 1765 aaPredicted RBP11.21□□□□□ -0.62
UBE2N-205ENST00000550657 ANKLE2Q86XL3 938 aa11.21□□□□□ -0.62
UBE2N-205ENST00000550657 CWC22Q9HCG8 908 aaKnown RBP11.21□□□□□ -0.62
UBE2N-205ENST00000550657 SALL3Q9BXA9 1300 aa11.21□□□□□ -0.62
UBE2N-205ENST00000550657 PRAMEF22A3QJZ6 481 aa11.2□□□□□ -0.62
UBE2N-205ENST00000550657 DTNBO60941 627 aa11.2□□□□□ -0.62
UBE2N-205ENST00000550657 KLHL40Q2TBA0 621 aa11.2□□□□□ -0.62
UBE2N-205ENST00000550657 RHPN1Q8TCX5 695 aa11.2□□□□□ -0.62
UBE2N-205ENST00000550657 DNAAF4Q8WXU2 420 aa11.2□□□□□ -0.62
UBE2N-205ENST00000550657 ZDHHC9Q9Y397 364 aa11.2□□□□□ -0.62
UBE2N-205ENST00000550657 SOS1Q07889 1333 aaPredicted RBP11.2□□□□□ -0.62
UBE2N-205ENST00000550657 NALCNQ8IZF0 1738 aa11.2□□□□□ -0.62
UBE2N-205ENST00000550657 AIMP1Q12904 312 aaKnown RBP11.2□□□□□ -0.62
UBE2N-205ENST00000550657 C1orf141Q5JVX7 400 aa11.19□□□□□ -0.62
UBE2N-205ENST00000550657 LMBRD1Q9NUN5 540 aa11.19□□□□□ -0.62
UBE2N-205ENST00000550657 NASPP49321 788 aaPredicted RBP11.19□□□□□ -0.62
UBE2N-205ENST00000550657 PROSER3Q2NL68 480 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms