RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 NPC1L1Q9UHC9 1359 aa14.63□□□□□ -0.07
NR4A1-215ENST00000550557 ANKRD18BA2A2Z9 1011 aa14.63□□□□□ -0.07
NR4A1-215ENST00000550557 IDH1O75874 414 aaKnown RBP14.63□□□□□ -0.07
NR4A1-215ENST00000550557 CNKSR2Q8WXI2 1034 aa14.63□□□□□ -0.07
NR4A1-215ENST00000550557 AKAP2Q9Y2D5 859 aa14.63□□□□□ -0.07
NR4A1-215ENST00000550557 KAT6BQ8WYB5 2073 aa14.63□□□□□ -0.07
NR4A1-215ENST00000550557 RARSP54136 660 aaKnown RBP14.63□□□□□ -0.07
NR4A1-215ENST00000550557 BRMS1Q9HCU9 246 aa14.63□□□□□ -0.07
NR4A1-215ENST00000550557 PUS7Q96PZ0 661 aaKnown RBP14.63□□□□□ -0.07
NR4A1-215ENST00000550557 WWC3Q9ULE0 1092 aa14.63□□□□□ -0.07
NR4A1-215ENST00000550557 PARP3Q9Y6F1 533 aa14.63□□□□□ -0.07
NR4A1-215ENST00000550557 LTKP29376 864 aa14.62□□□□□ -0.07
NR4A1-215ENST00000550557 STK11IPQ8N1F8 1099 aa14.62□□□□□ -0.07
NR4A1-215ENST00000550557 CCDC47Q96A33 483 aaKnown RBP14.62□□□□□ -0.07
NR4A1-215ENST00000550557 BRPF3Q9ULD4 1205 aa14.62□□□□□ -0.07
NR4A1-215ENST00000550557 ABCC11Q96J66 1382 aa14.62□□□□□ -0.07
NR4A1-215ENST00000550557 CHD1O14646 1710 aa14.62□□□□□ -0.07
NR4A1-215ENST00000550557 INSRP06213 1382 aa14.62□□□□□ -0.07
NR4A1-215ENST00000550557 CHMP5Q9NZZ3 219 aa14.62□□□□□ -0.07
NR4A1-215ENST00000550557 POLR3AO14802 1390 aaPredicted RBP14.62□□□□□ -0.07
NR4A1-215ENST00000550557 PES1O00541 588 aaKnown RBP14.62□□□□□ -0.07
NR4A1-215ENST00000550557 DNAAF4Q8WXU2 420 aa14.62□□□□□ -0.07
NR4A1-215ENST00000550557 YTHDC2Q9H6S0 1430 aaKnown RBP14.61□□□□□ -0.07
NR4A1-215ENST00000550557 TPD52L1Q16890 204 aaPredicted RBP14.61□□□□□ -0.07
NR4A1-215ENST00000550557 DDX17Q92841 729 aaKnown RBP14.61□□□□□ -0.07
NR4A1-215ENST00000550557 ZRANB1Q9UGI0 708 aa14.61□□□□□ -0.07
NR4A1-215ENST00000550557 PSMA5P28066 241 aa14.61□□□□□ -0.07
NR4A1-215ENST00000550557 CRACR2BQ8N4Y2 399 aaPredicted RBP14.61□□□□□ -0.07
NR4A1-215ENST00000550557 ARHGEF10O15013 1369 aa14.6□□□□□ -0.07
NR4A1-215ENST00000550557 ABCC1P33527 1531 aa14.6□□□□□ -0.07
NR4A1-215ENST00000550557 TDO2P48775 406 aa14.6□□□□□ -0.07
NR4A1-215ENST00000550557 DZIP1Q86YF9 867 aaKnown RBP14.6□□□□□ -0.07
NR4A1-215ENST00000550557 GCC1Q96CN9 775 aa14.6□□□□□ -0.07
NR4A1-215ENST00000550557 SLC39A6Q13433 755 aa14.6□□□□□ -0.07
NR4A1-215ENST00000550557 CDC45O75419 566 aa14.59□□□□□ -0.07
NR4A1-215ENST00000550557 FOXD4L6Q3SYB3 417 aaPredicted RBP14.59□□□□□ -0.07
NR4A1-215ENST00000550557 AKAP4Q5JQC9 854 aa14.59□□□□□ -0.07
NR4A1-215ENST00000550557 FOXD4L3Q6VB84 417 aaPredicted RBP14.59□□□□□ -0.07
NR4A1-215ENST00000550557 C16orf71Q8IYS4 520 aaPredicted RBP14.59□□□□□ -0.07
NR4A1-215ENST00000550557 FLT4P35916 1363 aa14.59□□□□□ -0.07
NR4A1-215ENST00000550557 ATP5J2-PTCD1G3V325 749 aa14.59□□□□□ -0.07
NR4A1-215ENST00000550557 CLEC11AQ9Y240 323 aa14.59□□□□□ -0.07
NR4A1-215ENST00000550557 RNF123Q5XPI4 1314 aa14.59□□□□□ -0.07
NR4A1-215ENST00000550557 SKOR2Q2VWA4 1001 aaPredicted RBP14.59□□□□□ -0.07
NR4A1-215ENST00000550557 NLRP3Q96P20 1036 aa14.59□□□□□ -0.07
NR4A1-215ENST00000550557 C22orf23Q9BZE7 217 aa14.59□□□□□ -0.07
NR4A1-215ENST00000550557 CWC25Q9NXE8 425 aaPredicted RBP14.59□□□□□ -0.07
NR4A1-215ENST00000550557 R3HCC1Q9Y3T6 440 aaKnown RBP14.59□□□□□ -0.07
NR4A1-215ENST00000550557 CROCC2H7BZ55 1655 aa14.59□□□□□ -0.07
NR4A1-215ENST00000550557 TMEM94Q12767 1356 aa14.59□□□□□ -0.07
NR4A1-215ENST00000550557 SIRT1Q96EB6 747 aa14.59□□□□□ -0.07
NR4A1-215ENST00000550557 CARD14Q9BXL6 1004 aa14.59□□□□□ -0.07
NR4A1-215ENST00000550557 SLC5A1P13866 664 aa14.58□□□□□ -0.07
NR4A1-215ENST00000550557 CCNL1Q9UK58 526 aaPredicted RBP14.58□□□□□ -0.07
NR4A1-215ENST00000550557 PLEKHH1Q9ULM0 1364 aa14.58□□□□□ -0.08
NR4A1-215ENST00000550557 APBA3O96018 575 aa14.58□□□□□ -0.08
NR4A1-215ENST00000550557 CEP89Q96ST8 783 aa14.58□□□□□ -0.08
NR4A1-215ENST00000550557 IL1RAPL2Q9NP60 686 aa14.58□□□□□ -0.08
NR4A1-215ENST00000550557 NPATQ14207 1427 aa14.58□□□□□ -0.08
NR4A1-215ENST00000550557 SLF2Q8IX21 1173 aa14.58□□□□□ -0.08
NR4A1-215ENST00000550557 IP6K1Q92551 441 aa14.58□□□□□ -0.08
NR4A1-215ENST00000550557 USP5P45974 858 aa14.57□□□□□ -0.08
NR4A1-215ENST00000550557 PCDH11XQ9BZA7 1347 aa14.57□□□□□ -0.08
NR4A1-215ENST00000550557 PCDH11YQ9BZA8 1340 aa14.57□□□□□ -0.08
NR4A1-215ENST00000550557 FOSBP53539 338 aa14.57□□□□□ -0.08
NR4A1-215ENST00000550557 NIP7Q9Y221 180 aaKnown RBP eCLIP14.57□□□□□ -0.08
NR4A1-215ENST00000550557 LDHAL6AQ6ZMR3 332 aa14.57□□□□□ -0.08
NR4A1-215ENST00000550557 SKAP1Q86WV1 359 aa14.57□□□□□ -0.08
NR4A1-215ENST00000550557 DCAF5Q96JK2 942 aa14.57□□□□□ -0.08
NR4A1-215ENST00000550557 GNPATO15228 680 aa14.57□□□□□ -0.08
NR4A1-215ENST00000550557 TPTE2Q6XPS3 522 aa14.57□□□□□ -0.08
NR4A1-215ENST00000550557 AIDAQ96BJ3 306 aa14.57□□□□□ -0.08
NR4A1-215ENST00000550557 EIF4A2Q14240 407 aaKnown RBP14.56□□□□□ -0.08
NR4A1-215ENST00000550557 TRAPPC3LQ5T215 181 aa14.56□□□□□ -0.08
NR4A1-215ENST00000550557 SMC3Q9UQE7 1217 aa14.56□□□□□ -0.08
NR4A1-215ENST00000550557 ANKRD13DQ6ZTN6 518 aa14.56□□□□□ -0.08
NR4A1-215ENST00000550557 RPAP2Q8IXW5 612 aaPredicted RBP14.56□□□□□ -0.08
NR4A1-215ENST00000550557 NFATC2IPQ8NCF5 419 aa14.56□□□□□ -0.08
NR4A1-215ENST00000550557 VPS37CA5D8V6 355 aaPredicted RBP14.56□□□□□ -0.08
NR4A1-215ENST00000550557 FAM83GA6ND36 823 aa14.56□□□□□ -0.08
NR4A1-215ENST00000550557 MPHOSPH10O00566 681 aaKnown RBP14.56□□□□□ -0.08
NR4A1-215ENST00000550557 KDM4AO75164 1064 aa14.56□□□□□ -0.08
NR4A1-215ENST00000550557 POLR3DP05423 398 aaPredicted RBP14.56□□□□□ -0.08
NR4A1-215ENST00000550557 ZNF772Q68DY9 489 aaPredicted RBP14.56□□□□□ -0.08
NR4A1-215ENST00000550557 PLXNC1O60486 1568 aa14.56□□□□□ -0.08
NR4A1-215ENST00000550557 ZCCHC11Q5TAX3 1644 aaKnown RBP14.55□□□□□ -0.08
NR4A1-215ENST00000550557 QTRT2Q9H974 415 aaKnown RBP14.55□□□□□ -0.08
NR4A1-215ENST00000550557 BLMP54132 1417 aaPredicted RBP14.55□□□□□ -0.08
NR4A1-215ENST00000550557 ZNF287Q9HBT7 754 aa14.55□□□□□ -0.08
NR4A1-215ENST00000550557 TRPC5Q9UL62 973 aaPredicted RBP14.55□□□□□ -0.08
NR4A1-215ENST00000550557 PLA2R1Q13018 1463 aa14.55□□□□□ -0.08
NR4A1-215ENST00000550557 F6X3S4 739 aa14.55□□□□□ -0.08
NR4A1-215ENST00000550557 FLIIQ13045 1269 aa14.55□□□□□ -0.08
NR4A1-215ENST00000550557 CCDC152Q4G0S7 254 aa14.55□□□□□ -0.08
NR4A1-215ENST00000550557 JDP2Q8WYK2 163 aa14.55□□□□□ -0.08
NR4A1-215ENST00000550557 MAP3K2Q9Y2U5 619 aa14.55□□□□□ -0.08
NR4A1-215ENST00000550557 UBE3BQ7Z3V4 1068 aa14.55□□□□□ -0.08
NR4A1-215ENST00000550557 MYO1BO43795 1136 aa14.54□□□□□ -0.08
NR4A1-215ENST00000550557 MAGI2Q86UL8 1455 aa14.54□□□□□ -0.08
NR4A1-215ENST00000550557 ANXA1P04083 346 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms