RNA–Protein interactions for RNA: ENST00000550379.1

RNF41-208, Transcript of ring finger protein 41, humanhuman

TSL 3

Gene RNF41, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-208ENST00000550379 MBIPQ9NS73 344 aa9.98□□□□□ -0.81
RNF41-208ENST00000550379 FANCIQ9NVI1 1328 aa9.98□□□□□ -0.81
RNF41-208ENST00000550379 PAPPAQ13219 1627 aa9.97□□□□□ -0.81
RNF41-208ENST00000550379 UBR2Q8IWV8 1755 aa9.97□□□□□ -0.81
RNF41-208ENST00000550379 ZNF790Q6PG37 636 aa9.97□□□□□ -0.81
RNF41-208ENST00000550379 MPRIPQ6WCQ1 1025 aa9.97□□□□□ -0.81
RNF41-208ENST00000550379 VSIG10Q8N0Z9 540 aa9.97□□□□□ -0.81
RNF41-208ENST00000550379 USP35Q9P2H5 1018 aa9.97□□□□□ -0.81
RNF41-208ENST00000550379 ITGB4P16144 1822 aa9.97□□□□□ -0.81
RNF41-208ENST00000550379 TOGARAM1Q9Y4F4 1720 aa9.96□□□□□ -0.81
RNF41-208ENST00000550379 RXRBP28702 533 aa9.96□□□□□ -0.82
RNF41-208ENST00000550379 EIF4A1P60842 406 aaKnown RBP9.96□□□□□ -0.82
RNF41-208ENST00000550379 DCTN1Q14203 1278 aa9.96□□□□□ -0.82
RNF41-208ENST00000550379 ALDH1L2Q3SY69 923 aa9.96□□□□□ -0.82
RNF41-208ENST00000550379 ILDR1Q86SU0 546 aaPredicted RBP9.96□□□□□ -0.82
RNF41-208ENST00000550379 SEPT12Q8IYM1 358 aa9.96□□□□□ -0.82
RNF41-208ENST00000550379 YTHDC1Q96MU7 727 aaKnown RBP9.96□□□□□ -0.82
RNF41-208ENST00000550379 CCDC9Q9Y3X0 531 aaKnown RBP9.96□□□□□ -0.82
RNF41-208ENST00000550379 VAMP4O75379 141 aa9.95□□□□□ -0.82
RNF41-208ENST00000550379 CABP4P57796 275 aa9.95□□□□□ -0.82
RNF41-208ENST00000550379 FAM196AQ6ZSG2 479 aa9.95□□□□□ -0.82
RNF41-208ENST00000550379 NFATC2IPQ8NCF5 419 aa9.95□□□□□ -0.82
RNF41-208ENST00000550379 THUMPD2Q9BTF0 503 aaKnown RBP9.95□□□□□ -0.82
RNF41-208ENST00000550379 SBF2Q86WG5 1849 aa9.95□□□□□ -0.82
RNF41-208ENST00000550379 IBTKQ9P2D0 1353 aaPredicted RBP9.94□□□□□ -0.82
RNF41-208ENST00000550379 ERBB4Q15303 1308 aa9.94□□□□□ -0.82
RNF41-208ENST00000550379 BTBD11A6QL63 1104 aa9.94□□□□□ -0.82
RNF41-208ENST00000550379 DDX54Q8TDD1 881 aaKnown RBP9.94□□□□□ -0.82
RNF41-208ENST00000550379 TEX13AQ9BXU3 409 aaPredicted RBP9.94□□□□□ -0.82
RNF41-208ENST00000550379 TSPYL4Q9UJ04 414 aa9.94□□□□□ -0.82
RNF41-208ENST00000550379 SALL2Q9Y467 1007 aaPredicted RBP9.94□□□□□ -0.82
RNF41-208ENST00000550379 NHSQ6T4R5 1651 aa9.93□□□□□ -0.82
RNF41-208ENST00000550379 GIGYF1O75420 1035 aaPredicted RBP9.93□□□□□ -0.82
RNF41-208ENST00000550379 POTEAQ6S8J7 498 aa9.93□□□□□ -0.82
RNF41-208ENST00000550379 KRT27Q7Z3Y8 459 aa9.93□□□□□ -0.82
RNF41-208ENST00000550379 PIGBQ92521 554 aa9.93□□□□□ -0.82
RNF41-208ENST00000550379 ARHGAP45Q92619 1136 aa9.93□□□□□ -0.82
RNF41-208ENST00000550379 SMARCC1Q92922 1105 aaPredicted RBP9.93□□□□□ -0.82
RNF41-208ENST00000550379 TMOD3Q9NYL9 352 aa9.93□□□□□ -0.82
RNF41-208ENST00000550379 BRWD3Q6RI45 1802 aa9.93□□□□□ -0.82
RNF41-208ENST00000550379 RARSP54136 660 aaKnown RBP9.92□□□□□ -0.82
RNF41-208ENST00000550379 EXOSC9Q06265 439 aaKnown RBP9.92□□□□□ -0.82
RNF41-208ENST00000550379 FMNL2Q96PY5 1086 aa9.92□□□□□ -0.82
RNF41-208ENST00000550379 BCL11BQ9C0K0 894 aaPredicted RBP9.92□□□□□ -0.82
RNF41-208ENST00000550379 RCAN3Q9UKA8 241 aa9.92□□□□□ -0.82
RNF41-208ENST00000550379 KCPQ6ZWJ8 1503 aa9.92□□□□□ -0.82
RNF41-208ENST00000550379 DOT1LQ8TEK3 1739 aa9.91□□□□□ -0.82
RNF41-208ENST00000550379 RGL2O15211 777 aa9.91□□□□□ -0.82
RNF41-208ENST00000550379 SNRPA1P09661 255 aaKnown RBP9.91□□□□□ -0.82
RNF41-208ENST00000550379 TWISTNBQ3B726 338 aaPredicted RBP9.91□□□□□ -0.82
RNF41-208ENST00000550379 C8orf58Q8NAV2 365 aa9.91□□□□□ -0.82
RNF41-208ENST00000550379 TSR2Q969E8 191 aaKnown RBP9.91□□□□□ -0.82
RNF41-208ENST00000550379 ATG3Q9NT62 314 aa9.91□□□□□ -0.82
RNF41-208ENST00000550379 RGS12O14924 1447 aa9.9□□□□□ -0.82
RNF41-208ENST00000550379 PLSCR1O15162 318 aa9.9□□□□□ -0.82
RNF41-208ENST00000550379 PRIM1P49642 420 aaKnown RBP9.9□□□□□ -0.82
RNF41-208ENST00000550379 ZNF496Q96IT1 587 aaPredicted RBP9.9□□□□□ -0.82
RNF41-208ENST00000550379 RGPD3A6NKT7 1758 aaPredicted RBP9.9□□□□□ -0.82
RNF41-208ENST00000550379 RGPD4Q7Z3J3 1758 aa9.9□□□□□ -0.82
RNF41-208ENST00000550379 KIF16BQ96L93 1317 aa9.89□□□□□ -0.83
RNF41-208ENST00000550379 PDE3AQ14432 1141 aa9.89□□□□□ -0.83
RNF41-208ENST00000550379 CCDC30Q5VVM6 783 aa9.89□□□□□ -0.83
RNF41-208ENST00000550379 ERICH6BQ5W0A0 696 aa9.89□□□□□ -0.83
RNF41-208ENST00000550379 TTC5Q8N0Z6 440 aa9.89□□□□□ -0.83
RNF41-208ENST00000550379 TSPYL6Q8N831 410 aa9.89□□□□□ -0.83
RNF41-208ENST00000550379 LAMB4A4D0S4 1761 aa9.88□□□□□ -0.83
RNF41-208ENST00000550379 LY75O60449 1722 aa9.88□□□□□ -0.83
RNF41-208ENST00000550379 MS4A1P11836 297 aa9.88□□□□□ -0.83
RNF41-208ENST00000550379 AAMPQ13685 434 aa9.88□□□□□ -0.83
RNF41-208ENST00000550379 PTPRCP08575 1304 aa9.87□□□□□ -0.83
RNF41-208ENST00000550379 RREB1Q92766 1687 aa9.87□□□□□ -0.83
RNF41-208ENST00000550379 BTAF1O14981 1849 aa9.87□□□□□ -0.83
RNF41-208ENST00000550379 IPO8O15397 1037 aaKnown RBP9.87□□□□□ -0.83
RNF41-208ENST00000550379 KCNQ3O43525 872 aa9.87□□□□□ -0.83
RNF41-208ENST00000550379 RC3H1Q5TC82 1133 aaKnown RBP9.87□□□□□ -0.83
RNF41-208ENST00000550379 LRP10Q7Z4F1 713 aa9.87□□□□□ -0.83
RNF41-208ENST00000550379 CCDC125Q86Z20 511 aa9.87□□□□□ -0.83
RNF41-208ENST00000550379 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.87□□□□□ -0.83
RNF41-208ENST00000550379 SSH1Q8WYL5 1049 aa9.87□□□□□ -0.83
RNF41-208ENST00000550379 DDX21Q9NR30 783 aaKnown RBP eCLIP9.87□□□□□ -0.83
RNF41-208ENST00000550379 MIS18AQ9NYP9 233 aa9.87□□□□□ -0.83
RNF41-208ENST00000550379 DBF4Q9UBU7 674 aaPredicted RBP9.87□□□□□ -0.83
RNF41-208ENST00000550379 ASAP1Q9ULH1 1129 aa9.87□□□□□ -0.83
RNF41-208ENST00000550379 LOC102724428A0A0B4J2F2 783 aa9.86□□□□□ -0.83
RNF41-208ENST00000550379 SIK1P57059 783 aa9.86□□□□□ -0.83
RNF41-208ENST00000550379 SLC39A6Q13433 755 aa9.86□□□□□ -0.83
RNF41-208ENST00000550379 PDIA6Q15084 440 aa9.86□□□□□ -0.83
RNF41-208ENST00000550379 SLC27A3Q5K4L6 730 aa9.86□□□□□ -0.83
RNF41-208ENST00000550379 MRPL50Q8N5N7 158 aaKnown RBP9.86□□□□□ -0.83
RNF41-208ENST00000550379 HYPKQ9NX55 129 aa9.86□□□□□ -0.83
RNF41-208ENST00000550379 LAS1LQ9Y4W2 734 aaKnown RBP9.86□□□□□ -0.83
RNF41-208ENST00000550379 KCNQ2O43526 872 aa9.85□□□□□ -0.83
RNF41-208ENST00000550379 STARD3NLO95772 234 aa9.85□□□□□ -0.83
RNF41-208ENST00000550379 HDGFL1Q5TGJ6 251 aa9.85□□□□□ -0.83
RNF41-208ENST00000550379 SLC4A9Q96Q91 983 aa9.85□□□□□ -0.83
RNF41-208ENST00000550379 C5P01031 1676 aa9.85□□□□□ -0.83
RNF41-208ENST00000550379 PALLDQ8WX93 1383 aa9.85□□□□□ -0.83
RNF41-208ENST00000550379 CNTNAP4Q9C0A0 1308 aa9.84□□□□□ -0.83
RNF41-208ENST00000550379 SENP3-EIF4A1A0A087X0R7 540 aa9.84□□□□□ -0.83
RNF41-208ENST00000550379 CYP19A1P11511 503 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms