RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 CCDC184Q52MB2 194 aa15.83■□□□□ 0.12
PFDN5-208ENST00000549995 MPRIPQ6WCQ1 1025 aa15.83■□□□□ 0.12
PFDN5-208ENST00000549995 SMARCC1Q92922 1105 aaPredicted RBP15.83■□□□□ 0.12
PFDN5-208ENST00000549995 SLC52A2Q9HAB3 445 aa15.83■□□□□ 0.12
PFDN5-208ENST00000549995 SYTL4Q96C24 671 aaPredicted RBP15.82■□□□□ 0.12
PFDN5-208ENST00000549995 LGR6Q9HBX8 967 aa15.82■□□□□ 0.12
PFDN5-208ENST00000549995 UBR3Q6ZT12 1888 aa15.82■□□□□ 0.12
PFDN5-208ENST00000549995 NFE2L2Q16236 605 aa15.81■□□□□ 0.12
PFDN5-208ENST00000549995 IL17REQ8NFR9 667 aa15.81■□□□□ 0.12
PFDN5-208ENST00000549995 PNISRQ8TF01 805 aaKnown RBP15.81■□□□□ 0.12
PFDN5-208ENST00000549995 ATG3Q9NT62 314 aa15.81■□□□□ 0.12
PFDN5-208ENST00000549995 LRRC4BQ9NT99 713 aa15.81■□□□□ 0.12
PFDN5-208ENST00000549995 ADAMTS8Q9UP79 889 aa15.81■□□□□ 0.12
PFDN5-208ENST00000549995 WDR43Q15061 677 aaKnown RBP eCLIP15.8■□□□□ 0.12
PFDN5-208ENST00000549995 RUNDC1Q96C34 613 aa15.8■□□□□ 0.12
PFDN5-208ENST00000549995 LRP5O75197 1615 aa15.79■□□□□ 0.12
PFDN5-208ENST00000549995 MAPK8IP3Q9UPT6 1336 aa15.79■□□□□ 0.12
PFDN5-208ENST00000549995 HMGB2P26583 209 aaKnown RBP15.79■□□□□ 0.12
PFDN5-208ENST00000549995 CABP4P57796 275 aa15.79■□□□□ 0.12
PFDN5-208ENST00000549995 NEFMP07197 916 aa15.78■□□□□ 0.12
PFDN5-208ENST00000549995 NFATC2IPQ8NCF5 419 aa15.78■□□□□ 0.12
PFDN5-208ENST00000549995 ANO8Q9HCE9 1232 aaPredicted RBP15.78■□□□□ 0.12
PFDN5-208ENST00000549995 ASAP1Q9ULH1 1129 aa15.78■□□□□ 0.12
PFDN5-208ENST00000549995 LAMB4A4D0S4 1761 aa15.77■□□□□ 0.12
PFDN5-208ENST00000549995 NCBP3Q53F19 620 aaKnown RBP15.77■□□□□ 0.12
PFDN5-208ENST00000549995 AKT1S1Q96B36 256 aa15.77■□□□□ 0.12
PFDN5-208ENST00000549995 TMPOP42166 694 aaKnown RBP15.76■□□□□ 0.11
PFDN5-208ENST00000549995 MRS2Q9HD23 443 aa15.76■□□□□ 0.11
PFDN5-208ENST00000549995 CCNL1Q9UK58 526 aaPredicted RBP15.76■□□□□ 0.11
PFDN5-208ENST00000549995 MYH14Q7Z406 1995 aaKnown RBP15.76■□□□□ 0.11
PFDN5-208ENST00000549995 LOC102724428A0A0B4J2F2 783 aa15.75■□□□□ 0.11
PFDN5-208ENST00000549995 SIK1P57059 783 aa15.75■□□□□ 0.11
PFDN5-208ENST00000549995 NBPF14Q5TI25 921 aa15.75■□□□□ 0.11
PFDN5-208ENST00000549995 SLC4A9Q96Q91 983 aa15.75■□□□□ 0.11
PFDN5-208ENST00000549995 CCER2I3L3R5 266 aa15.74■□□□□ 0.11
PFDN5-208ENST00000549995 SLC15A2Q16348 729 aa15.74■□□□□ 0.11
PFDN5-208ENST00000549995 C4AP0C0L4 1744 aa15.74■□□□□ 0.11
PFDN5-208ENST00000549995 LMOD3Q0VAK6 560 aa15.73■□□□□ 0.11
PFDN5-208ENST00000549995 TEFQ10587 303 aa15.73■□□□□ 0.11
PFDN5-208ENST00000549995 ZNF827Q17R98 1081 aa15.73■□□□□ 0.11
PFDN5-208ENST00000549995 VSIG10Q8N0Z9 540 aa15.73■□□□□ 0.11
PFDN5-208ENST00000549995 RTF1Q92541 710 aaKnown RBP15.73■□□□□ 0.11
PFDN5-208ENST00000549995 ITPK1Q13572 414 aa15.72■□□□□ 0.11
PFDN5-208ENST00000549995 MCM10Q7L590 875 aa15.72■□□□□ 0.11
PFDN5-208ENST00000549995 TRIM35Q9UPQ4 493 aa15.72■□□□□ 0.11
PFDN5-208ENST00000549995 HEG1Q9ULI3 1381 aa15.72■□□□□ 0.11
PFDN5-208ENST00000549995 RIPK4P57078 832 aa15.71■□□□□ 0.11
PFDN5-208ENST00000549995 ZNF790Q6PG37 636 aa15.71■□□□□ 0.11
PFDN5-208ENST00000549995 CCDC146Q8IYE0 955 aa15.71■□□□□ 0.11
PFDN5-208ENST00000549995 BABAM1Q9NWV8 329 aa15.71■□□□□ 0.11
PFDN5-208ENST00000549995 STK32BQ9NY57 414 aa15.71■□□□□ 0.11
PFDN5-208ENST00000549995 CNTNAP4Q9C0A0 1308 aa15.7■□□□□ 0.1
PFDN5-208ENST00000549995 DCTN1Q14203 1278 aa15.7■□□□□ 0.1
PFDN5-208ENST00000549995 DIEXFQ68CQ4 756 aaKnown RBP15.7■□□□□ 0.1
PFDN5-208ENST00000549995 LINC00116Q8NCU8 138 aa15.7■□□□□ 0.1
PFDN5-208ENST00000549995 ATP6V1AP38606 617 aa15.69■□□□□ 0.1
PFDN5-208ENST00000549995 SLC39A6Q13433 755 aa15.69■□□□□ 0.1
PFDN5-208ENST00000549995 R3HDM1Q15032 1099 aaKnown RBP15.69■□□□□ 0.1
PFDN5-208ENST00000549995 TAF7Q15545 349 aaPredicted RBP15.69■□□□□ 0.1
PFDN5-208ENST00000549995 CCDC27Q2M243 656 aa15.69■□□□□ 0.1
PFDN5-208ENST00000549995 RC3H1Q5TC82 1133 aaKnown RBP15.69■□□□□ 0.1
PFDN5-208ENST00000549995 PNPLA7Q6ZV29 1317 aa15.68■□□□□ 0.1
PFDN5-208ENST00000549995 BTBD11A6QL63 1104 aa15.68■□□□□ 0.1
PFDN5-208ENST00000549995 KCNQ4P56696 695 aa15.68■□□□□ 0.1
PFDN5-208ENST00000549995 APAF1O14727 1248 aa15.67■□□□□ 0.1
PFDN5-208ENST00000549995 PSDA5PKW4 1024 aaPredicted RBP15.66■□□□□ 0.1
PFDN5-208ENST00000549995 TTC5Q8N0Z6 440 aa15.66■□□□□ 0.1
PFDN5-208ENST00000549995 ZNF496Q96IT1 587 aaPredicted RBP15.66■□□□□ 0.1
PFDN5-208ENST00000549995 RBM42Q9BTD8 480 aaKnown RBP15.66■□□□□ 0.1
PFDN5-208ENST00000549995 BCORQ6W2J9 1755 aa15.65■□□□□ 0.1
PFDN5-208ENST00000549995 SCN7AQ01118 1682 aa15.65■□□□□ 0.1
PFDN5-208ENST00000549995 PTCD1O75127 700 aaKnown RBP15.65■□□□□ 0.1
PFDN5-208ENST00000549995 SSFA2P28290 1259 aa15.65■□□□□ 0.1
PFDN5-208ENST00000549995 NGEFQ8N5V2 710 aa15.65■□□□□ 0.1
PFDN5-208ENST00000549995 FMNL2Q96PY5 1086 aa15.65■□□□□ 0.1
PFDN5-208ENST00000549995 THUMPD2Q9BTF0 503 aaKnown RBP15.65■□□□□ 0.1
PFDN5-208ENST00000549995 RRP7AQ9Y3A4 280 aaKnown RBP15.65■□□□□ 0.1
PFDN5-208ENST00000549995 ZNF853P0CG23 659 aa15.64■□□□□ 0.09
PFDN5-208ENST00000549995 CYP19A1P11511 503 aaPredicted RBP15.64■□□□□ 0.09
PFDN5-208ENST00000549995 FLAD1Q8NFF5 587 aa15.64■□□□□ 0.09
PFDN5-208ENST00000549995 SLC16A10Q8TF71 515 aa15.64■□□□□ 0.09
PFDN5-208ENST00000549995 TEX13AQ9BXU3 409 aaPredicted RBP15.64■□□□□ 0.09
PFDN5-208ENST00000549995 CHL1O00533 1208 aa15.63■□□□□ 0.09
PFDN5-208ENST00000549995 KCNQ3O43525 872 aa15.63■□□□□ 0.09
PFDN5-208ENST00000549995 ADRA2BP18089 450 aa15.63■□□□□ 0.09
PFDN5-208ENST00000549995 AMIGO3Q86WK7 504 aa15.63■□□□□ 0.09
PFDN5-208ENST00000549995 DNAJC10Q8IXB1 793 aa15.63■□□□□ 0.09
PFDN5-208ENST00000549995 RPS6KA4O75676 772 aa15.62■□□□□ 0.09
PFDN5-208ENST00000549995 EIF4A1P60842 406 aaKnown RBP15.62■□□□□ 0.09
PFDN5-208ENST00000549995 AK7Q96M32 723 aa15.62■□□□□ 0.09
PFDN5-208ENST00000549995 PDGFDQ9GZP0 370 aaPredicted RBP15.62■□□□□ 0.09
PFDN5-208ENST00000549995 CRKLP46109 303 aaKnown RBP15.61■□□□□ 0.09
PFDN5-208ENST00000549995 CALD1Q05682 793 aaKnown RBP15.61■□□□□ 0.09
PFDN5-208ENST00000549995 INTS5Q6P9B9 1019 aaKnown RBP15.61■□□□□ 0.09
PFDN5-208ENST00000549995 CFAP44Q96MT7 982 aa15.61■□□□□ 0.09
PFDN5-208ENST00000549995 SGIP1Q9BQI5 828 aa15.61■□□□□ 0.09
PFDN5-208ENST00000549995 TFCP2L1Q9NZI6 479 aa15.61■□□□□ 0.09
PFDN5-208ENST00000549995 SOS1Q07889 1333 aaPredicted RBP15.61■□□□□ 0.09
PFDN5-208ENST00000549995 IL16Q14005 1332 aa15.61■□□□□ 0.09
PFDN5-208ENST00000549995 NEUROD2Q15784 382 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms