RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 SLCO4C1Q6ZQN7 724 aa8.64□□□□□ -1.03
SNRPF-202ENST00000549580 PIK3R2O00459 728 aa8.63□□□□□ -1.03
SNRPF-202ENST00000549580 SLC27A3Q5K4L6 730 aa8.63□□□□□ -1.03
SNRPF-202ENST00000549580 TIMMDC1Q9NPL8 285 aa8.63□□□□□ -1.03
SNRPF-202ENST00000549580 ATP1B4Q9UN42 357 aaPredicted RBP8.63□□□□□ -1.03
SNRPF-202ENST00000549580 WASLO00401 505 aaPredicted RBP8.61□□□□□ -1.03
SNRPF-202ENST00000549580 C2CD2LO14523 706 aa8.61□□□□□ -1.03
SNRPF-202ENST00000549580 AMPD1P23109 780 aa8.61□□□□□ -1.03
SNRPF-202ENST00000549580 BRPF1P55201 1214 aaPredicted RBP8.61□□□□□ -1.03
SNRPF-202ENST00000549580 SKIV2LQ15477 1246 aaKnown RBP8.61□□□□□ -1.03
SNRPF-202ENST00000549580 TAS1R3Q7RTX0 852 aa8.61□□□□□ -1.03
SNRPF-202ENST00000549580 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.61□□□□□ -1.03
SNRPF-202ENST00000549580 CLN3Q13286 438 aa8.6□□□□□ -1.03
SNRPF-202ENST00000549580 RSPO4Q2I0M5 234 aaPredicted RBP8.6□□□□□ -1.03
SNRPF-202ENST00000549580 TRIM52Q96A61 297 aa8.6□□□□□ -1.03
SNRPF-202ENST00000549580 BTBD6Q96KE9 485 aa8.6□□□□□ -1.03
SNRPF-202ENST00000549580 NOP53Q9NZM5 478 aaKnown RBP8.6□□□□□ -1.03
SNRPF-202ENST00000549580 GGA1Q9UJY5 639 aa8.6□□□□□ -1.03
SNRPF-202ENST00000549580 TIMELESSQ9UNS1 1208 aa8.6□□□□□ -1.03
SNRPF-202ENST00000549580 PHF24Q9UPV7 400 aa8.6□□□□□ -1.03
SNRPF-202ENST00000549580 SCO2A0A1W2PP80 73 aa8.59□□□□□ -1.03
SNRPF-202ENST00000549580 GIGYF1O75420 1035 aaPredicted RBP8.59□□□□□ -1.03
SNRPF-202ENST00000549580 EPXP11678 715 aa8.59□□□□□ -1.03
SNRPF-202ENST00000549580 ERVK-9P63128 1117 aa8.59□□□□□ -1.03
SNRPF-202ENST00000549580 NLRP3Q96P20 1036 aa8.59□□□□□ -1.03
SNRPF-202ENST00000549580 ARTNQ5T4W7 220 aa8.58□□□□□ -1.04
SNRPF-202ENST00000549580 USP17L8P0C7I0 530 aa8.57□□□□□ -1.04
SNRPF-202ENST00000549580 NKAPLQ5M9Q1 402 aa8.57□□□□□ -1.04
SNRPF-202ENST00000549580 GPAMQ9HCL2 828 aa8.57□□□□□ -1.04
SNRPF-202ENST00000549580 BMP4P12644 408 aa8.56□□□□□ -1.04
SNRPF-202ENST00000549580 GATA4P43694 442 aa8.56□□□□□ -1.04
SNRPF-202ENST00000549580 LBRQ14739 615 aaKnown RBP8.56□□□□□ -1.04
SNRPF-202ENST00000549580 SH3D19Q5HYK7 790 aa8.56□□□□□ -1.04
SNRPF-202ENST00000549580 ERICH6Q7L0X2 663 aa8.56□□□□□ -1.04
SNRPF-202ENST00000549580 FAM117AQ9C073 453 aa8.56□□□□□ -1.04
SNRPF-202ENST00000549580 GPBP1L1Q9HC44 474 aaPredicted RBP8.56□□□□□ -1.04
SNRPF-202ENST00000549580 ZFP64Q9NPA5 681 aa8.56□□□□□ -1.04
SNRPF-202ENST00000549580 NDFIP2Q9NV92 336 aa8.56□□□□□ -1.04
SNRPF-202ENST00000549580 ATXN7L1Q9ULK2 861 aaPredicted RBP8.56□□□□□ -1.04
SNRPF-202ENST00000549580 CC2D2BQ6DHV5 1058 aa8.55□□□□□ -1.04
SNRPF-202ENST00000549580 RNF135Q8IUD6 432 aa8.54□□□□□ -1.04
SNRPF-202ENST00000549580 TRIM34Q9BYJ4 488 aa8.54□□□□□ -1.04
SNRPF-202ENST00000549580 FGFR3P22607 806 aa8.53□□□□□ -1.04
SNRPF-202ENST00000549580 SCTRP47872 440 aa8.53□□□□□ -1.04
SNRPF-202ENST00000549580 CTBSQ01459 385 aa8.53□□□□□ -1.04
SNRPF-202ENST00000549580 CYP2U1Q7Z449 544 aa8.53□□□□□ -1.04
SNRPF-202ENST00000549580 ABHD17AQ96GS6 310 aa8.53□□□□□ -1.04
SNRPF-202ENST00000549580 PCDHB9Q9Y5E1 797 aa8.53□□□□□ -1.04
SNRPF-202ENST00000549580 A0A1B0GTH6 734 aa8.52□□□□□ -1.05
SNRPF-202ENST00000549580 ARAFP10398 606 aa8.52□□□□□ -1.05
SNRPF-202ENST00000549580 ARHGEF10LQ9HCE6 1279 aa8.52□□□□□ -1.05
SNRPF-202ENST00000549580 CHSY3Q70JA7 882 aa8.51□□□□□ -1.05
SNRPF-202ENST00000549580 PNMA1Q8ND90 353 aa8.51□□□□□ -1.05
SNRPF-202ENST00000549580 TRIM11Q96F44 468 aa8.51□□□□□ -1.05
SNRPF-202ENST00000549580 DYRK3O43781 588 aa8.5□□□□□ -1.05
SNRPF-202ENST00000549580 BNIP3LO60238 219 aa8.5□□□□□ -1.05
SNRPF-202ENST00000549580 TRAK2O60296 914 aa8.5□□□□□ -1.05
SNRPF-202ENST00000549580 NEUROD2Q15784 382 aa8.5□□□□□ -1.05
SNRPF-202ENST00000549580 CCDC125Q86Z20 511 aa8.5□□□□□ -1.05
SNRPF-202ENST00000549580 KDM4CQ9H3R0 1056 aa8.5□□□□□ -1.05
SNRPF-202ENST00000549580 OSBPL3Q9H4L5 887 aa8.5□□□□□ -1.05
SNRPF-202ENST00000549580 GOLGA2P5Q9HBQ8 144 aa8.5□□□□□ -1.05
SNRPF-202ENST00000549580 TPSG1Q9NRR2 321 aa8.5□□□□□ -1.05
SNRPF-202ENST00000549580 FBXO45P0C2W1 286 aa8.49□□□□□ -1.05
SNRPF-202ENST00000549580 SPATA31C1P0DKV0 1188 aa8.49□□□□□ -1.05
SNRPF-202ENST00000549580 RFC5P40937 340 aa8.49□□□□□ -1.05
SNRPF-202ENST00000549580 PHKA2P46019 1235 aa8.49□□□□□ -1.05
SNRPF-202ENST00000549580 RUBCNLQ9H714 662 aa8.49□□□□□ -1.05
SNRPF-202ENST00000549580 RAB6BQ9NRW1 208 aa8.49□□□□□ -1.05
SNRPF-202ENST00000549580 NEURL1BA8MQ27 555 aa8.48□□□□□ -1.05
SNRPF-202ENST00000549580 HRH3Q9Y5N1 445 aa8.48□□□□□ -1.05
SNRPF-202ENST00000549580 IL2RAP01589 272 aa8.47□□□□□ -1.05
SNRPF-202ENST00000549580 NBPF11Q86T75 865 aa8.47□□□□□ -1.05
SNRPF-202ENST00000549580 ZBBXA8MT70 800 aa8.46□□□□□ -1.06
SNRPF-202ENST00000549580 CENPCQ03188 943 aa8.46□□□□□ -1.06
SNRPF-202ENST00000549580 ESYT1Q9BSJ8 1104 aa8.46□□□□□ -1.06
SNRPF-202ENST00000549580 KLF15Q9UIH9 416 aa8.46□□□□□ -1.06
SNRPF-202ENST00000549580 CSB-PGBD3P0DP91 1061 aa8.45□□□□□ -1.06
SNRPF-202ENST00000549580 MSX1P28360 303 aa8.45□□□□□ -1.06
SNRPF-202ENST00000549580 PGBD3Q8N328 593 aa8.45□□□□□ -1.06
SNRPF-202ENST00000549580 CNKSR1Q969H4 720 aa8.45□□□□□ -1.06
SNRPF-202ENST00000549580 PLVAPQ9BX97 442 aa8.45□□□□□ -1.06
SNRPF-202ENST00000549580 PCDHB11Q9Y5F2 797 aa8.45□□□□□ -1.06
SNRPF-202ENST00000549580 C4orf17Q53FE4 359 aa8.44□□□□□ -1.06
SNRPF-202ENST00000549580 EFHC2Q5JST6 749 aa8.44□□□□□ -1.06
SNRPF-202ENST00000549580 PRSS36Q5K4E3 855 aa8.44□□□□□ -1.06
SNRPF-202ENST00000549580 FCHSD1Q86WN1 690 aa8.44□□□□□ -1.06
SNRPF-202ENST00000549580 FHDC1Q9C0D6 1143 aaPredicted RBP8.44□□□□□ -1.06
SNRPF-202ENST00000549580 CRISPLD1Q9H336 500 aa8.44□□□□□ -1.06
SNRPF-202ENST00000549580 DDRGK1Q96HY6 314 aa8.43□□□□□ -1.06
SNRPF-202ENST00000549580 GJD4Q96KN9 370 aaPredicted RBP8.43□□□□□ -1.06
SNRPF-202ENST00000549580 ZSCAN10Q96SZ4 725 aaPredicted RBP8.43□□□□□ -1.06
SNRPF-202ENST00000549580 DNAAF2Q9NVR5 837 aaKnown RBP8.43□□□□□ -1.06
SNRPF-202ENST00000549580 HCN2Q9UL51 889 aa8.43□□□□□ -1.06
SNRPF-202ENST00000549580 GNRH1P01148 92 aa8.42□□□□□ -1.06
SNRPF-202ENST00000549580 ADH6P28332 368 aa8.42□□□□□ -1.06
SNRPF-202ENST00000549580 LRP8Q14114 963 aa8.41□□□□□ -1.06
SNRPF-202ENST00000549580 RNF20Q5VTR2 975 aa8.41□□□□□ -1.06
SNRPF-202ENST00000549580 AVENQ9NQS1 362 aaPredicted RBP8.4□□□□□ -1.06
SNRPF-202ENST00000549580 STAU1O95793 577 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms