RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 PNNQ9H307 717 aaKnown RBP10.66□□□□□ -0.7
DEPDC4-207ENST00000549249 FAM83GA6ND36 823 aa10.65□□□□□ -0.7
DEPDC4-207ENST00000549249 HAP1P54257 671 aaPredicted RBP10.65□□□□□ -0.7
DEPDC4-207ENST00000549249 NFE2L2Q16236 605 aa10.65□□□□□ -0.7
DEPDC4-207ENST00000549249 CCDC27Q2M243 656 aa10.65□□□□□ -0.7
DEPDC4-207ENST00000549249 OCEL1Q9H607 264 aa10.65□□□□□ -0.7
DEPDC4-207ENST00000549249 PKD1L3Q7Z443 1732 aa10.64□□□□□ -0.71
DEPDC4-207ENST00000549249 WNK3Q9BYP7 1800 aa10.64□□□□□ -0.71
DEPDC4-207ENST00000549249 PSEN1P49768 467 aa10.64□□□□□ -0.71
DEPDC4-207ENST00000549249 PDE3BQ13370 1112 aa10.64□□□□□ -0.71
DEPDC4-207ENST00000549249 CDAN1Q8IWY9 1227 aa10.64□□□□□ -0.71
DEPDC4-207ENST00000549249 LRRC37A3O60309 1634 aa10.64□□□□□ -0.71
DEPDC4-207ENST00000549249 NWD2Q9ULI1 1742 aa10.64□□□□□ -0.71
DEPDC4-207ENST00000549249 RIPK4P57078 832 aa10.63□□□□□ -0.71
DEPDC4-207ENST00000549249 PDAP1Q13442 181 aaKnown RBP10.63□□□□□ -0.71
DEPDC4-207ENST00000549249 RNF25Q96BH1 459 aaPredicted RBP10.63□□□□□ -0.71
DEPDC4-207ENST00000549249 PARP4Q9UKK3 1724 aaKnown RBP10.63□□□□□ -0.71
DEPDC4-207ENST00000549249 MEGF6O75095 1541 aa10.63□□□□□ -0.71
DEPDC4-207ENST00000549249 LRP6O75581 1613 aa10.62□□□□□ -0.71
DEPDC4-207ENST00000549249 WDR17Q8IZU2 1322 aa10.62□□□□□ -0.71
DEPDC4-207ENST00000549249 SHANK3Q9BYB0 1731 aa10.62□□□□□ -0.71
DEPDC4-207ENST00000549249 ST18O60284 1047 aa10.62□□□□□ -0.71
DEPDC4-207ENST00000549249 NEFMP07197 916 aa10.62□□□□□ -0.71
DEPDC4-207ENST00000549249 GOLGA2Q08379 1002 aa10.62□□□□□ -0.71
DEPDC4-207ENST00000549249 SLFN5Q08AF3 891 aa10.62□□□□□ -0.71
DEPDC4-207ENST00000549249 MTHFSDQ2M296 383 aaKnown RBP10.62□□□□□ -0.71
DEPDC4-207ENST00000549249 DUSP27Q5VZP5 1158 aa10.62□□□□□ -0.71
DEPDC4-207ENST00000549249 TRMT2AQ8IZ69 625 aaKnown RBP10.62□□□□□ -0.71
DEPDC4-207ENST00000549249 AFF2P51816 1311 aa10.61□□□□□ -0.71
DEPDC4-207ENST00000549249 RIOK3O14730 519 aaKnown RBP10.61□□□□□ -0.71
DEPDC4-207ENST00000549249 WDR63Q8IWG1 891 aa10.61□□□□□ -0.71
DEPDC4-207ENST00000549249 NGLY1Q96IV0 654 aa10.61□□□□□ -0.71
DEPDC4-207ENST00000549249 QTRT2Q9H974 415 aaKnown RBP10.61□□□□□ -0.71
DEPDC4-207ENST00000549249 ADAMTS7Q9UKP4 1686 aa10.6□□□□□ -0.71
DEPDC4-207ENST00000549249 SLIT2O94813 1529 aa10.6□□□□□ -0.71
DEPDC4-207ENST00000549249 CSB-PGBD3P0DP91 1061 aa10.6□□□□□ -0.71
DEPDC4-207ENST00000549249 RBM6P78332 1123 aaKnown RBP10.6□□□□□ -0.71
DEPDC4-207ENST00000549249 UPF1Q92900 1129 aaKnown RBP eCLIP10.6□□□□□ -0.71
DEPDC4-207ENST00000549249 C8orf37Q96NL8 207 aa10.6□□□□□ -0.71
DEPDC4-207ENST00000549249 THUMPD2Q9BTF0 503 aaKnown RBP10.6□□□□□ -0.71
DEPDC4-207ENST00000549249 NLRP2Q9NX02 1062 aa10.6□□□□□ -0.71
DEPDC4-207ENST00000549249 E9PSI1 815 aa10.59□□□□□ -0.71
DEPDC4-207ENST00000549249 ADAMTS2O95450 1211 aa10.59□□□□□ -0.71
DEPDC4-207ENST00000549249 DCTN1Q14203 1278 aa10.59□□□□□ -0.71
DEPDC4-207ENST00000549249 LARP1Q6PKG0 1096 aaKnown RBP10.59□□□□□ -0.71
DEPDC4-207ENST00000549249 GAS2L2Q8NHY3 880 aa10.59□□□□□ -0.71
DEPDC4-207ENST00000549249 STRN4Q9NRL3 753 aa10.59□□□□□ -0.71
DEPDC4-207ENST00000549249 BTG4Q9NY30 223 aa10.59□□□□□ -0.71
DEPDC4-207ENST00000549249 SCN11AQ9UI33 1791 aa10.59□□□□□ -0.71
DEPDC4-207ENST00000549249 IL16Q14005 1332 aa10.58□□□□□ -0.71
DEPDC4-207ENST00000549249 CRB1P82279 1406 aa10.58□□□□□ -0.72
DEPDC4-207ENST00000549249 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.58□□□□□ -0.72
DEPDC4-207ENST00000549249 SIPA1L3O60292 1781 aaPredicted RBP10.58□□□□□ -0.72
DEPDC4-207ENST00000549249 MAP3K5Q99683 1374 aa10.58□□□□□ -0.72
DEPDC4-207ENST00000549249 CARD10Q9BWT7 1032 aa10.58□□□□□ -0.72
DEPDC4-207ENST00000549249 OVOS2A0A0G2JMS6 1433 aa10.58□□□□□ -0.72
DEPDC4-207ENST00000549249 PLEKHG2Q9H7P9 1386 aa10.57□□□□□ -0.72
DEPDC4-207ENST00000549249 LMOD3Q0VAK6 560 aa10.57□□□□□ -0.72
DEPDC4-207ENST00000549249 TOM1L2Q6ZVM7 507 aa10.57□□□□□ -0.72
DEPDC4-207ENST00000549249 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.57□□□□□ -0.72
DEPDC4-207ENST00000549249 DISP2A7MBM2 1401 aa10.57□□□□□ -0.72
DEPDC4-207ENST00000549249 TATP17735 454 aaPredicted RBP10.56□□□□□ -0.72
DEPDC4-207ENST00000549249 EVA1CP58658 441 aa10.56□□□□□ -0.72
DEPDC4-207ENST00000549249 PLEKHO1Q53GL0 409 aaPredicted RBP10.56□□□□□ -0.72
DEPDC4-207ENST00000549249 MCM10Q7L590 875 aa10.56□□□□□ -0.72
DEPDC4-207ENST00000549249 FANCIQ9NVI1 1328 aa10.56□□□□□ -0.72
DEPDC4-207ENST00000549249 CEMIPQ8WUJ3 1361 aa10.55□□□□□ -0.72
DEPDC4-207ENST00000549249 KDM3BQ7LBC6 1761 aa10.55□□□□□ -0.72
DEPDC4-207ENST00000549249 GNAT3A8MTJ3 354 aa10.55□□□□□ -0.72
DEPDC4-207ENST00000549249 RGL2O15211 777 aa10.55□□□□□ -0.72
DEPDC4-207ENST00000549249 ZNF853P0CG23 659 aa10.55□□□□□ -0.72
DEPDC4-207ENST00000549249 AMOTQ4VCS5 1084 aa10.55□□□□□ -0.72
DEPDC4-207ENST00000549249 ZNF530Q6P9A1 599 aaPredicted RBP10.55□□□□□ -0.72
DEPDC4-207ENST00000549249 RAPGEF4Q8WZA2 1011 aa10.55□□□□□ -0.72
DEPDC4-207ENST00000549249 TSR2Q969E8 191 aaKnown RBP10.55□□□□□ -0.72
DEPDC4-207ENST00000549249 TRPC5Q9UL62 973 aaPredicted RBP10.55□□□□□ -0.72
DEPDC4-207ENST00000549249 SNPHO15079 494 aa10.54□□□□□ -0.72
DEPDC4-207ENST00000549249 KDM6AO15550 1401 aaPredicted RBP10.54□□□□□ -0.72
DEPDC4-207ENST00000549249 HTATSF1O43719 755 aaKnown RBP10.54□□□□□ -0.72
DEPDC4-207ENST00000549249 AKAP4Q5JQC9 854 aa10.54□□□□□ -0.72
DEPDC4-207ENST00000549249 IL17REQ8NFR9 667 aa10.54□□□□□ -0.72
DEPDC4-207ENST00000549249 MYH16Q9H6N6 1097 aa10.54□□□□□ -0.72
DEPDC4-207ENST00000549249 USP21Q9UK80 565 aa10.54□□□□□ -0.72
DEPDC4-207ENST00000549249 SUPT16HQ9Y5B9 1047 aaKnown RBP10.54□□□□□ -0.72
DEPDC4-207ENST00000549249 BCL9LQ86UU0 1499 aa10.54□□□□□ -0.72
DEPDC4-207ENST00000549249 TOGARAM1Q9Y4F4 1720 aa10.53□□□□□ -0.72
DEPDC4-207ENST00000549249 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.53□□□□□ -0.72
DEPDC4-207ENST00000549249 ZFP91Q96JP5 570 aaPredicted RBP10.53□□□□□ -0.72
DEPDC4-207ENST00000549249 TMEM121BQ9BXQ6 578 aaPredicted RBP10.53□□□□□ -0.72
DEPDC4-207ENST00000549249 IFT57Q9NWB7 429 aa10.53□□□□□ -0.72
DEPDC4-207ENST00000549249 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.53□□□□□ -0.72
DEPDC4-207ENST00000549249 RCAN3Q9UKA8 241 aa10.53□□□□□ -0.72
DEPDC4-207ENST00000549249 MRC1P22897 1456 aa10.53□□□□□ -0.72
DEPDC4-207ENST00000549249 RNF123Q5XPI4 1314 aa10.53□□□□□ -0.72
DEPDC4-207ENST00000549249 CYP27B1O15528 508 aa10.52□□□□□ -0.73
DEPDC4-207ENST00000549249 RNMTO43148 476 aaKnown RBP10.52□□□□□ -0.73
DEPDC4-207ENST00000549249 IL2RBP14784 551 aa10.52□□□□□ -0.73
DEPDC4-207ENST00000549249 PHKG2P15735 406 aa10.52□□□□□ -0.73
DEPDC4-207ENST00000549249 CALD1Q05682 793 aaKnown RBP10.52□□□□□ -0.73
DEPDC4-207ENST00000549249 FNBP4Q8N3X1 1017 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms