RNA–Protein interactions for RNA: ENST00000548209.5

LETMD1-213, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-213ENST00000548209 HNRNPUQ00839 825 aaKnown RBP eCLIP14.25□□□□□ -0.13
LETMD1-213ENST00000548209 NME9Q86XW9 330 aa14.25□□□□□ -0.13
LETMD1-213ENST00000548209 MRS2Q9HD23 443 aa14.25□□□□□ -0.13
LETMD1-213ENST00000548209 NEFLP07196 543 aa14.24□□□□□ -0.13
LETMD1-213ENST00000548209 SSFA2P28290 1259 aa14.24□□□□□ -0.13
LETMD1-213ENST00000548209 FAM161AQ3B820 660 aa14.24□□□□□ -0.13
LETMD1-213ENST00000548209 TIAM2Q8IVF5 1701 aa14.24□□□□□ -0.13
LETMD1-213ENST00000548209 MMP10P09238 476 aa14.23□□□□□ -0.13
LETMD1-213ENST00000548209 IP6K1Q92551 441 aa14.23□□□□□ -0.13
LETMD1-213ENST00000548209 POLR3GLQ9BT43 218 aa14.23□□□□□ -0.13
LETMD1-213ENST00000548209 RNF181Q9P0P0 153 aa14.23□□□□□ -0.13
LETMD1-213ENST00000548209 CCDC184Q52MB2 194 aa14.22□□□□□ -0.13
LETMD1-213ENST00000548209 DPEP1P16444 411 aa14.21□□□□□ -0.13
LETMD1-213ENST00000548209 MPRIPQ6WCQ1 1025 aa14.21□□□□□ -0.13
LETMD1-213ENST00000548209 SMARCC1Q92922 1105 aaPredicted RBP14.21□□□□□ -0.13
LETMD1-213ENST00000548209 VIRMAQ69YN4 1812 aaKnown RBP14.2□□□□□ -0.14
LETMD1-213ENST00000548209 FOXN1O15353 648 aa14.19□□□□□ -0.14
LETMD1-213ENST00000548209 PRDM10Q9NQV6 1147 aa14.19□□□□□ -0.14
LETMD1-213ENST00000548209 CCDC87Q9NVE4 849 aa14.19□□□□□ -0.14
LETMD1-213ENST00000548209 SBNO2Q9Y2G9 1366 aa14.19□□□□□ -0.14
LETMD1-213ENST00000548209 GNPATO15228 680 aa14.18□□□□□ -0.14
LETMD1-213ENST00000548209 FKBP8Q14318 412 aa14.18□□□□□ -0.14
LETMD1-213ENST00000548209 CGNL1Q0VF96 1302 aa14.17□□□□□ -0.14
LETMD1-213ENST00000548209 ZBED9Q6R2W3 1325 aa14.17□□□□□ -0.14
LETMD1-213ENST00000548209 DICER1Q9UPY3 1922 aaKnown RBP14.17□□□□□ -0.14
LETMD1-213ENST00000548209 RALBP1Q15311 655 aa14.17□□□□□ -0.14
LETMD1-213ENST00000548209 FAM9BQ8IZU0 186 aa14.17□□□□□ -0.14
LETMD1-213ENST00000548209 LINC00116Q8NCU8 138 aa14.17□□□□□ -0.14
LETMD1-213ENST00000548209 CD163L1Q9NR16 1453 aa14.17□□□□□ -0.14
LETMD1-213ENST00000548209 PCDH11XQ9BZA7 1347 aa14.16□□□□□ -0.14
LETMD1-213ENST00000548209 PCDH11YQ9BZA8 1340 aa14.16□□□□□ -0.14
LETMD1-213ENST00000548209 VEGFAP15692 232 aaPredicted RBP14.16□□□□□ -0.14
LETMD1-213ENST00000548209 RAPGEF4Q8WZA2 1011 aa14.16□□□□□ -0.14
LETMD1-213ENST00000548209 DCAF5Q96JK2 942 aa14.16□□□□□ -0.14
LETMD1-213ENST00000548209 MKRN1Q9UHC7 482 aaKnown RBP14.16□□□□□ -0.14
LETMD1-213ENST00000548209 EDC4Q6P2E9 1401 aaKnown RBP14.15□□□□□ -0.14
LETMD1-213ENST00000548209 HOXC9P31274 260 aa14.15□□□□□ -0.14
LETMD1-213ENST00000548209 PIM2Q9P1W9 311 aa14.15□□□□□ -0.14
LETMD1-213ENST00000548209 COL5A3P25940 1745 aaPredicted RBP14.15□□□□□ -0.14
LETMD1-213ENST00000548209 LOC102724428A0A0B4J2F2 783 aa14.14□□□□□ -0.15
LETMD1-213ENST00000548209 TATP17735 454 aaPredicted RBP14.14□□□□□ -0.15
LETMD1-213ENST00000548209 KCNA3P22001 575 aa14.14□□□□□ -0.15
LETMD1-213ENST00000548209 AMPHP49418 695 aa14.14□□□□□ -0.15
LETMD1-213ENST00000548209 CTCFP49711 727 aaPredicted RBP14.14□□□□□ -0.15
LETMD1-213ENST00000548209 SIK1P57059 783 aa14.14□□□□□ -0.15
LETMD1-213ENST00000548209 TMF1P82094 1093 aa14.14□□□□□ -0.15
LETMD1-213ENST00000548209 DALRD3Q5D0E6 543 aaKnown RBP14.14□□□□□ -0.15
LETMD1-213ENST00000548209 NLGN1Q8N2Q7 840 aa14.14□□□□□ -0.15
LETMD1-213ENST00000548209 USHBP1Q8N6Y0 703 aa14.14□□□□□ -0.15
LETMD1-213ENST00000548209 AIDAQ96BJ3 306 aa14.14□□□□□ -0.15
LETMD1-213ENST00000548209 TESK2Q96S53 571 aa14.14□□□□□ -0.15
LETMD1-213ENST00000548209 MYH14Q7Z406 1995 aaKnown RBP14.14□□□□□ -0.15
LETMD1-213ENST00000548209 MYBBP1AQ9BQG0 1328 aaKnown RBP14.14□□□□□ -0.15
LETMD1-213ENST00000548209 ZC3H4Q9UPT8 1303 aaKnown RBP14.14□□□□□ -0.15
LETMD1-213ENST00000548209 PDE4DIPQ5VU43 2346 aa14.13□□□□□ -0.15
LETMD1-213ENST00000548209 MLLT1Q03111 559 aaPredicted RBP14.13□□□□□ -0.15
LETMD1-213ENST00000548209 HDGFL2Q7Z4V5 671 aaPredicted RBP14.13□□□□□ -0.15
LETMD1-213ENST00000548209 ABHD8Q96I13 439 aa14.13□□□□□ -0.15
LETMD1-213ENST00000548209 PARP3Q9Y6F1 533 aa14.13□□□□□ -0.15
LETMD1-213ENST00000548209 MAP3K19Q56UN5 1328 aa14.13□□□□□ -0.15
LETMD1-213ENST00000548209 DLEC1Q9Y238 1755 aa14.12□□□□□ -0.15
LETMD1-213ENST00000548209 NBPF6Q5VWK0 638 aa14.12□□□□□ -0.15
LETMD1-213ENST00000548209 NBPF4Q96M43 638 aa14.12□□□□□ -0.15
LETMD1-213ENST00000548209 CREBZFQ9NS37 354 aa14.12□□□□□ -0.15
LETMD1-213ENST00000548209 GLTPD2A6NH11 291 aa14.11□□□□□ -0.15
LETMD1-213ENST00000548209 SMG6Q86US8 1419 aaKnown RBP14.11□□□□□ -0.15
LETMD1-213ENST00000548209 TMC1Q8TDI8 760 aa14.11□□□□□ -0.15
LETMD1-213ENST00000548209 PIGBQ92521 554 aa14.11□□□□□ -0.15
LETMD1-213ENST00000548209 AFDNP55196 1824 aaKnown RBP14.11□□□□□ -0.15
LETMD1-213ENST00000548209 ZNF831Q5JPB2 1677 aa14.1□□□□□ -0.15
LETMD1-213ENST00000548209 ATP6V1AP38606 617 aa14.1□□□□□ -0.15
LETMD1-213ENST00000548209 RASSF7Q02833 373 aa14.1□□□□□ -0.15
LETMD1-213ENST00000548209 ITPK1Q13572 414 aa14.1□□□□□ -0.15
LETMD1-213ENST00000548209 TRAPPC3LQ5T215 181 aa14.1□□□□□ -0.15
LETMD1-213ENST00000548209 ERICH6BQ5W0A0 696 aa14.1□□□□□ -0.15
LETMD1-213ENST00000548209 KDM6AO15550 1401 aaPredicted RBP14.09□□□□□ -0.15
LETMD1-213ENST00000548209 TNRC18O15417 2968 aaPredicted RBP14.09□□□□□ -0.15
LETMD1-213ENST00000548209 CYP27B1O15528 508 aa14.09□□□□□ -0.15
LETMD1-213ENST00000548209 LBX1P52954 281 aa14.09□□□□□ -0.15
LETMD1-213ENST00000548209 RTCBQ9Y3I0 505 aaKnown RBP14.09□□□□□ -0.15
LETMD1-213ENST00000548209 RTL1A6NKG5 1358 aa14.09□□□□□ -0.15
LETMD1-213ENST00000548209 CNTNAP1P78357 1384 aa14.09□□□□□ -0.15
LETMD1-213ENST00000548209 CDCA8Q53HL2 280 aa14.08□□□□□ -0.16
LETMD1-213ENST00000548209 PNISRQ8TF01 805 aaKnown RBP14.08□□□□□ -0.16
LETMD1-213ENST00000548209 A0A1W2PP64 1363 aa14.08□□□□□ -0.16
LETMD1-213ENST00000548209 SLC24A1O60721 1099 aa14.07□□□□□ -0.16
LETMD1-213ENST00000548209 GYS1P13807 737 aa14.07□□□□□ -0.16
LETMD1-213ENST00000548209 LMNB1P20700 586 aa14.07□□□□□ -0.16
LETMD1-213ENST00000548209 FBLN1P23142 703 aa14.07□□□□□ -0.16
LETMD1-213ENST00000548209 COG3Q96JB2 828 aa14.07□□□□□ -0.16
LETMD1-213ENST00000548209 TERF2IPQ9NYB0 399 aa14.07□□□□□ -0.16
LETMD1-213ENST00000548209 CCDC85CA6NKD9 419 aa14.06□□□□□ -0.16
LETMD1-213ENST00000548209 PER1O15534 1290 aaPredicted RBP14.06□□□□□ -0.16
LETMD1-213ENST00000548209 RFC4P35249 363 aa14.06□□□□□ -0.16
LETMD1-213ENST00000548209 SLC12A5Q9H2X9 1139 aa14.06□□□□□ -0.16
LETMD1-213ENST00000548209 TMOD3Q9NYL9 352 aa14.06□□□□□ -0.16
LETMD1-213ENST00000548209 ADRA2BP18089 450 aa14.05□□□□□ -0.16
LETMD1-213ENST00000548209 CHRNA5P30532 468 aa14.05□□□□□ -0.16
LETMD1-213ENST00000548209 ARHGEF1Q92888 912 aaKnown RBP14.05□□□□□ -0.16
LETMD1-213ENST00000548209 ASAP1Q9ULH1 1129 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms