RNA–Protein interactions for RNA: ENST00000548140.1

HECTD4-206, Transcript of HECT domain E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HECTD4, Length 1,426 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD4-206ENST00000548140 MIS18AQ9NYP9 233 aa21.22■□□□□ 0.99
HECTD4-206ENST00000548140 BRWD3Q6RI45 1802 aa21.22■□□□□ 0.99
HECTD4-206ENST00000548140 ZNF853P0CG23 659 aa21.21■□□□□ 0.99
HECTD4-206ENST00000548140 SYTL4Q96C24 671 aaPredicted RBP21.21■□□□□ 0.99
HECTD4-206ENST00000548140 ACSBG1Q96GR2 724 aa21.21■□□□□ 0.99
HECTD4-206ENST00000548140 BTBD11A6QL63 1104 aa21.21■□□□□ 0.99
HECTD4-206ENST00000548140 CHL1O00533 1208 aa21.21■□□□□ 0.99
HECTD4-206ENST00000548140 TSR2Q969E8 191 aaKnown RBP21.21■□□□□ 0.99
HECTD4-206ENST00000548140 TMOD3Q9NYL9 352 aa21.21■□□□□ 0.99
HECTD4-206ENST00000548140 TSPYL4Q9UJ04 414 aa21.21■□□□□ 0.99
HECTD4-206ENST00000548140 TOGARAM1Q9Y4F4 1720 aa21.2■□□□□ 0.98
HECTD4-206ENST00000548140 MRC1P22897 1456 aa21.2■□□□□ 0.98
HECTD4-206ENST00000548140 PRIM1P49642 420 aaKnown RBP21.2■□□□□ 0.98
HECTD4-206ENST00000548140 MBIPQ9NS73 344 aa21.2■□□□□ 0.98
HECTD4-206ENST00000548140 DUSP27Q5VZP5 1158 aa21.19■□□□□ 0.98
HECTD4-206ENST00000548140 TRMT2AQ8IZ69 625 aaKnown RBP21.19■□□□□ 0.98
HECTD4-206ENST00000548140 BABAM1Q9NWV8 329 aa21.19■□□□□ 0.98
HECTD4-206ENST00000548140 FANCIQ9NVI1 1328 aa21.18■□□□□ 0.98
HECTD4-206ENST00000548140 DOT1LQ8TEK3 1739 aa21.18■□□□□ 0.98
HECTD4-206ENST00000548140 SIPA1L3O60292 1781 aaPredicted RBP21.16■□□□□ 0.98
HECTD4-206ENST00000548140 KAT6BQ8WYB5 2073 aa21.16■□□□□ 0.98
HECTD4-206ENST00000548140 FAM196AQ6ZSG2 479 aa21.16■□□□□ 0.98
HECTD4-206ENST00000548140 PIGBQ92521 554 aa21.16■□□□□ 0.98
HECTD4-206ENST00000548140 KCNQ2O43526 872 aa21.15■□□□□ 0.98
HECTD4-206ENST00000548140 SLC39A6Q13433 755 aa21.15■□□□□ 0.98
HECTD4-206ENST00000548140 BCL9O00512 1426 aa21.15■□□□□ 0.98
HECTD4-206ENST00000548140 ITGB4P16144 1822 aa21.15■□□□□ 0.98
HECTD4-206ENST00000548140 KCNQ3O43525 872 aa21.14■□□□□ 0.98
HECTD4-206ENST00000548140 ZNF790Q6PG37 636 aa21.13■□□□□ 0.97
HECTD4-206ENST00000548140 TTC5Q8N0Z6 440 aa21.13■□□□□ 0.97
HECTD4-206ENST00000548140 EXOSC9Q06265 439 aaKnown RBP21.12■□□□□ 0.97
HECTD4-206ENST00000548140 CENPBP07199 599 aaPredicted RBP21.11■□□□□ 0.97
HECTD4-206ENST00000548140 ASAP1Q9ULH1 1129 aa21.11■□□□□ 0.97
HECTD4-206ENST00000548140 KDM3BQ7LBC6 1761 aa21.11■□□□□ 0.97
HECTD4-206ENST00000548140 EIF4A1P60842 406 aaKnown RBP21.1■□□□□ 0.97
HECTD4-206ENST00000548140 ATG3Q9NT62 314 aa21.1■□□□□ 0.97
HECTD4-206ENST00000548140 ELL2O00472 640 aaPredicted RBP21.09■□□□□ 0.97
HECTD4-206ENST00000548140 KRT24Q2M2I5 525 aa21.09■□□□□ 0.97
HECTD4-206ENST00000548140 PTF1AQ7RTS3 328 aa21.09■□□□□ 0.97
HECTD4-206ENST00000548140 C8orf58Q8NAV2 365 aa21.09■□□□□ 0.97
HECTD4-206ENST00000548140 NHSQ6T4R5 1651 aa21.09■□□□□ 0.97
HECTD4-206ENST00000548140 TRIM37O94972 964 aa21.08■□□□□ 0.97
HECTD4-206ENST00000548140 SBF2Q86WG5 1849 aa21.08■□□□□ 0.96
HECTD4-206ENST00000548140 PTCD1O75127 700 aaKnown RBP21.07■□□□□ 0.96
HECTD4-206ENST00000548140 ZNF496Q96IT1 587 aaPredicted RBP21.07■□□□□ 0.96
HECTD4-206ENST00000548140 BCL11BQ9C0K0 894 aaPredicted RBP21.07■□□□□ 0.96
HECTD4-206ENST00000548140 TSPYL6Q8N831 410 aa21.06■□□□□ 0.96
HECTD4-206ENST00000548140 FMNL2Q96PY5 1086 aa21.06■□□□□ 0.96
HECTD4-206ENST00000548140 PAPPAQ13219 1627 aa21.06■□□□□ 0.96
HECTD4-206ENST00000548140 TWISTNBQ3B726 338 aaPredicted RBP21.05■□□□□ 0.96
HECTD4-206ENST00000548140 SMARCC1Q92922 1105 aaPredicted RBP21.05■□□□□ 0.96
HECTD4-206ENST00000548140 RBM42Q9BTD8 480 aaKnown RBP21.04■□□□□ 0.96
HECTD4-206ENST00000548140 BTAF1O14981 1849 aa21.03■□□□□ 0.96
HECTD4-206ENST00000548140 KCPQ6ZWJ8 1503 aa21.03■□□□□ 0.96
HECTD4-206ENST00000548140 VAMP4O75379 141 aa21.03■□□□□ 0.96
HECTD4-206ENST00000548140 CT47B1P0C2W7 299 aaPredicted RBP21.03■□□□□ 0.96
HECTD4-206ENST00000548140 PALLDQ8WX93 1383 aa21.02■□□□□ 0.96
HECTD4-206ENST00000548140 HEG1Q9ULI3 1381 aa21.02■□□□□ 0.96
HECTD4-206ENST00000548140 GIGYF1O75420 1035 aaPredicted RBP21.02■□□□□ 0.96
HECTD4-206ENST00000548140 SNRPA1P09661 255 aaKnown RBP21.02■□□□□ 0.96
HECTD4-206ENST00000548140 UBR2Q8IWV8 1755 aa21.01■□□□□ 0.95
HECTD4-206ENST00000548140 PRAMEF22A3QJZ6 481 aa21■□□□□ 0.95
HECTD4-206ENST00000548140 SOS1Q07889 1333 aaPredicted RBP21■□□□□ 0.95
HECTD4-206ENST00000548140 HOXB7P09629 217 aa20.99■□□□□ 0.95
HECTD4-206ENST00000548140 EIF2S2P20042 333 aaKnown RBP20.99■□□□□ 0.95
HECTD4-206ENST00000548140 RCAN3Q9UKA8 241 aa20.99■□□□□ 0.95
HECTD4-206ENST00000548140 LOC102724428A0A0B4J2F2 783 aa20.98■□□□□ 0.95
HECTD4-206ENST00000548140 SIK1P57059 783 aa20.98■□□□□ 0.95
HECTD4-206ENST00000548140 VSIG10Q8N0Z9 540 aa20.98■□□□□ 0.95
HECTD4-206ENST00000548140 NECTIN2Q92692 538 aa20.98■□□□□ 0.95
HECTD4-206ENST00000548140 SLC4A9Q96Q91 983 aa20.98■□□□□ 0.95
HECTD4-206ENST00000548140 ATP6V1AP38606 617 aa20.97■□□□□ 0.95
HECTD4-206ENST00000548140 HDGFL1Q5TGJ6 251 aa20.97■□□□□ 0.95
HECTD4-206ENST00000548140 ZNF428Q96B54 188 aa20.97■□□□□ 0.95
HECTD4-206ENST00000548140 TCERG1O14776 1098 aaKnown RBP20.96■□□□□ 0.95
HECTD4-206ENST00000548140 APBA3O96018 575 aa20.96■□□□□ 0.95
HECTD4-206ENST00000548140 RARSP54136 660 aaKnown RBP20.96■□□□□ 0.95
HECTD4-206ENST00000548140 USP16Q9Y5T5 823 aa20.96■□□□□ 0.95
HECTD4-206ENST00000548140 EP400Q96L91 3159 aa20.96■□□□□ 0.95
HECTD4-206ENST00000548140 CCDC30Q5VVM6 783 aa20.95■□□□□ 0.95
HECTD4-206ENST00000548140 DNAJC10Q8IXB1 793 aa20.95■□□□□ 0.95
HECTD4-206ENST00000548140 TEX13AQ9BXU3 409 aaPredicted RBP20.95■□□□□ 0.95
HECTD4-206ENST00000548140 CHMP4AQ9BY43 222 aa20.95■□□□□ 0.95
HECTD4-206ENST00000548140 C5P01031 1676 aa20.95■□□□□ 0.94
HECTD4-206ENST00000548140 ALDH1L2Q3SY69 923 aa20.94■□□□□ 0.94
HECTD4-206ENST00000548140 SSH1Q8WYL5 1049 aa20.94■□□□□ 0.94
HECTD4-206ENST00000548140 BCL2L13Q9BXK5 485 aa20.94■□□□□ 0.94
HECTD4-206ENST00000548140 SMC4Q9NTJ3 1288 aa20.94■□□□□ 0.94
HECTD4-206ENST00000548140 STK31Q9BXU1 1019 aa20.93■□□□□ 0.94
HECTD4-206ENST00000548140 CCNL1Q9UK58 526 aaPredicted RBP20.93■□□□□ 0.94
HECTD4-206ENST00000548140 BCAR3O75815 825 aa20.92■□□□□ 0.94
HECTD4-206ENST00000548140 STARD3NLO95772 234 aa20.92■□□□□ 0.94
HECTD4-206ENST00000548140 KCNQ4P56696 695 aa20.92■□□□□ 0.94
HECTD4-206ENST00000548140 SF3B2Q13435 895 aaKnown RBP20.92■□□□□ 0.94
HECTD4-206ENST00000548140 ITPK1Q13572 414 aa20.92■□□□□ 0.94
HECTD4-206ENST00000548140 PLSCR1O15162 318 aa20.91■□□□□ 0.94
HECTD4-206ENST00000548140 TNS1Q9HBL0 1735 aaKnown RBP20.9■□□□□ 0.94
HECTD4-206ENST00000548140 SLC4A2P04920 1241 aa20.9■□□□□ 0.94
HECTD4-206ENST00000548140 CHPF2Q9P2E5 772 aa20.9■□□□□ 0.94
HECTD4-206ENST00000548140 LAMB4A4D0S4 1761 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms