RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 ATG3Q9NT62 314 aa21.3■■□□□ 1
DDX54-204ENST00000546898 ASAP1Q9ULH1 1129 aa21.3■■□□□ 1
DDX54-204ENST00000546898 ZBTB7AO95365 584 aa21.29■■□□□ 1
DDX54-204ENST00000546898 MTHFSDQ2M296 383 aaKnown RBP21.29■■□□□ 1
DDX54-204ENST00000546898 SLC16A10Q8TF71 515 aa21.29■■□□□ 1
DDX54-204ENST00000546898 RALBP1Q15311 655 aa21.28■■□□□ 1
DDX54-204ENST00000546898 GAS2L2Q8NHY3 880 aa21.28■■□□□ 1
DDX54-204ENST00000546898 RSPH6AQ9H0K4 717 aa21.27■■□□□ 1
DDX54-204ENST00000546898 SIPA1L3O60292 1781 aaPredicted RBP21.26■□□□□ 0.99
DDX54-204ENST00000546898 PPP1R1BQ9UD71 204 aaPredicted RBP21.26■□□□□ 0.99
DDX54-204ENST00000546898 MAP3K5Q99683 1374 aa21.25■□□□□ 0.99
DDX54-204ENST00000546898 RNMTO43148 476 aaKnown RBP21.25■□□□□ 0.99
DDX54-204ENST00000546898 U2AF1L5P0DN76 240 aaPredicted RBP21.25■□□□□ 0.99
DDX54-204ENST00000546898 PRKAR2BP31323 418 aa21.25■□□□□ 0.99
DDX54-204ENST00000546898 ATP6V1AP38606 617 aa21.25■□□□□ 0.99
DDX54-204ENST00000546898 U2AF1Q01081 240 aaKnown RBP eCLIP21.25■□□□□ 0.99
DDX54-204ENST00000546898 NFATC2IPQ8NCF5 419 aa21.25■□□□□ 0.99
DDX54-204ENST00000546898 TJP1Q07157 1748 aa21.24■□□□□ 0.99
DDX54-204ENST00000546898 PTGER2P43116 358 aa21.24■□□□□ 0.99
DDX54-204ENST00000546898 FLAD1Q8NFF5 587 aa21.24■□□□□ 0.99
DDX54-204ENST00000546898 AK7Q96M32 723 aa21.24■□□□□ 0.99
DDX54-204ENST00000546898 SLC52A2Q9HAB3 445 aa21.24■□□□□ 0.99
DDX54-204ENST00000546898 ATF5Q9Y2D1 282 aaPredicted RBP21.24■□□□□ 0.99
DDX54-204ENST00000546898 UBR2Q8IWV8 1755 aa21.23■□□□□ 0.99
DDX54-204ENST00000546898 FCHSD2O94868 740 aa21.23■□□□□ 0.99
DDX54-204ENST00000546898 ITPK1Q13572 414 aa21.22■□□□□ 0.99
DDX54-204ENST00000546898 LINC00116Q8NCU8 138 aa21.22■□□□□ 0.99
DDX54-204ENST00000546898 SGIP1Q9BQI5 828 aa21.22■□□□□ 0.99
DDX54-204ENST00000546898 LGR6Q9HBX8 967 aa21.22■□□□□ 0.99
DDX54-204ENST00000546898 GNAT3A8MTJ3 354 aa21.21■□□□□ 0.99
DDX54-204ENST00000546898 RBM42Q9BTD8 480 aaKnown RBP21.21■□□□□ 0.99
DDX54-204ENST00000546898 COL23A1Q86Y22 540 aaPredicted RBP21.2■□□□□ 0.98
DDX54-204ENST00000546898 MYBBP1AQ9BQG0 1328 aaKnown RBP21.2■□□□□ 0.98
DDX54-204ENST00000546898 DLG5Q8TDM6 1919 aa21.19■□□□□ 0.98
DDX54-204ENST00000546898 SSFA2P28290 1259 aa21.19■□□□□ 0.98
DDX54-204ENST00000546898 PHACTR3Q96KR7 559 aa21.19■□□□□ 0.98
DDX54-204ENST00000546898 SLC4A9Q96Q91 983 aa21.19■□□□□ 0.98
DDX54-204ENST00000546898 MYH14Q7Z406 1995 aaKnown RBP21.19■□□□□ 0.98
DDX54-204ENST00000546898 MSH5O43196 834 aa21.18■□□□□ 0.98
DDX54-204ENST00000546898 KCPQ6ZWJ8 1503 aa21.18■□□□□ 0.98
DDX54-204ENST00000546898 POLD1P28340 1107 aa21.17■□□□□ 0.98
DDX54-204ENST00000546898 CNTNAP4Q9C0A0 1308 aa21.17■□□□□ 0.98
DDX54-204ENST00000546898 CEMIPQ8WUJ3 1361 aa21.17■□□□□ 0.98
DDX54-204ENST00000546898 PTCD1O75127 700 aaKnown RBP21.16■□□□□ 0.98
DDX54-204ENST00000546898 TEFQ10587 303 aa21.16■□□□□ 0.98
DDX54-204ENST00000546898 GNPATO15228 680 aa21.15■□□□□ 0.98
DDX54-204ENST00000546898 NEFMP07197 916 aa21.15■□□□□ 0.98
DDX54-204ENST00000546898 RC3H1Q5TC82 1133 aaKnown RBP21.15■□□□□ 0.98
DDX54-204ENST00000546898 ARXQ96QS3 562 aa21.15■□□□□ 0.98
DDX54-204ENST00000546898 C4AP0C0L4 1744 aa21.15■□□□□ 0.98
DDX54-204ENST00000546898 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.14■□□□□ 0.97
DDX54-204ENST00000546898 IL17REQ8NFR9 667 aa21.14■□□□□ 0.97
DDX54-204ENST00000546898 PNNQ9H307 717 aaKnown RBP21.14■□□□□ 0.97
DDX54-204ENST00000546898 PHF14O94880 888 aa21.13■□□□□ 0.97
DDX54-204ENST00000546898 AMIGO3Q86WK7 504 aa21.13■□□□□ 0.97
DDX54-204ENST00000546898 HTATSF1O43719 755 aaKnown RBP21.12■□□□□ 0.97
DDX54-204ENST00000546898 RTF1Q92541 710 aaKnown RBP21.12■□□□□ 0.97
DDX54-204ENST00000546898 RTCBQ9Y3I0 505 aaKnown RBP21.12■□□□□ 0.97
DDX54-204ENST00000546898 ADRA2BP18089 450 aa21.11■□□□□ 0.97
DDX54-204ENST00000546898 SLC39A6Q13433 755 aa21.11■□□□□ 0.97
DDX54-204ENST00000546898 TTC5Q8N0Z6 440 aa21.11■□□□□ 0.97
DDX54-204ENST00000546898 PRKRIP1Q9H875 184 aaPredicted RBP21.11■□□□□ 0.97
DDX54-204ENST00000546898 VSIG10Q8N0Z9 540 aa21.1■□□□□ 0.97
DDX54-204ENST00000546898 FHDC1Q9C0D6 1143 aaPredicted RBP21.1■□□□□ 0.97
DDX54-204ENST00000546898 RPS6KA4O75676 772 aa21.09■□□□□ 0.97
DDX54-204ENST00000546898 PLEKHF1Q96S99 279 aa21.09■□□□□ 0.97
DDX54-204ENST00000546898 MAPK8IP3Q9UPT6 1336 aa21.08■□□□□ 0.97
DDX54-204ENST00000546898 ZNF316A6NFI3 1004 aaPredicted RBP21.08■□□□□ 0.97
DDX54-204ENST00000546898 CRKLP46109 303 aaKnown RBP21.08■□□□□ 0.97
DDX54-204ENST00000546898 TRAPPC3LQ5T215 181 aa21.08■□□□□ 0.97
DDX54-204ENST00000546898 MSL1Q68DK7 614 aa21.08■□□□□ 0.97
DDX54-204ENST00000546898 SYT17Q9BSW7 474 aa21.08■□□□□ 0.97
DDX54-204ENST00000546898 ZNF790Q6PG37 636 aa21.07■□□□□ 0.96
DDX54-204ENST00000546898 DNAJC10Q8IXB1 793 aa21.07■□□□□ 0.96
DDX54-204ENST00000546898 SMIM5Q71RC9 77 aa21.06■□□□□ 0.96
DDX54-204ENST00000546898 BTBD11A6QL63 1104 aa21.05■□□□□ 0.96
DDX54-204ENST00000546898 NFE2L2Q16236 605 aa21.05■□□□□ 0.96
DDX54-204ENST00000546898 MCM10Q7L590 875 aa21.05■□□□□ 0.96
DDX54-204ENST00000546898 CCDC87Q9NVE4 849 aa21.05■□□□□ 0.96
DDX54-204ENST00000546898 HEG1Q9ULI3 1381 aa21.05■□□□□ 0.96
DDX54-204ENST00000546898 KDM3BQ7LBC6 1761 aa21.05■□□□□ 0.96
DDX54-204ENST00000546898 DCAF8L1A6NGE4 600 aa21.04■□□□□ 0.96
DDX54-204ENST00000546898 CYP19A1P11511 503 aaPredicted RBP21.03■□□□□ 0.96
DDX54-204ENST00000546898 ARHGEF1Q92888 912 aaKnown RBP21.03■□□□□ 0.96
DDX54-204ENST00000546898 ZNF496Q96IT1 587 aaPredicted RBP21.03■□□□□ 0.96
DDX54-204ENST00000546898 FMNL2Q96PY5 1086 aa21.03■□□□□ 0.96
DDX54-204ENST00000546898 RFC4P35249 363 aa21.02■□□□□ 0.96
DDX54-204ENST00000546898 WDR43Q15061 677 aaKnown RBP eCLIP21.02■□□□□ 0.96
DDX54-204ENST00000546898 INTS5Q6P9B9 1019 aaKnown RBP21.02■□□□□ 0.96
DDX54-204ENST00000546898 TEX13AQ9BXU3 409 aaPredicted RBP21.02■□□□□ 0.96
DDX54-204ENST00000546898 LAMB4A4D0S4 1761 aa21.01■□□□□ 0.95
DDX54-204ENST00000546898 DCTN1Q14203 1278 aa21.01■□□□□ 0.95
DDX54-204ENST00000546898 KLHL34Q8N239 644 aa21.01■□□□□ 0.95
DDX54-204ENST00000546898 SOS1Q07889 1333 aaPredicted RBP21.01■□□□□ 0.95
DDX54-204ENST00000546898 KIF13BQ9NQT8 1826 aa21■□□□□ 0.95
DDX54-204ENST00000546898 STARD3NLO95772 234 aa21■□□□□ 0.95
DDX54-204ENST00000546898 NLGN1Q8N2Q7 840 aa21■□□□□ 0.95
DDX54-204ENST00000546898 ZBTB1Q9Y2K1 713 aa20.99■□□□□ 0.95
DDX54-204ENST00000546898 USP42Q9H9J4 1324 aaKnown RBP20.99■□□□□ 0.95
DDX54-204ENST00000546898 COL15A1P39059 1388 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 314.5 ms