RNA–Protein interactions for RNA: ENST00000544454.5

LTBR-213, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-213ENST00000544454 STK32BQ9NY57 414 aa18.13■□□□□ 0.49
LTBR-213ENST00000544454 PSDA5PKW4 1024 aaPredicted RBP18.12■□□□□ 0.49
LTBR-213ENST00000544454 KCNQ4P56696 695 aa18.12■□□□□ 0.49
LTBR-213ENST00000544454 TEFQ10587 303 aa18.12■□□□□ 0.49
LTBR-213ENST00000544454 SLC15A2Q16348 729 aa18.12■□□□□ 0.49
LTBR-213ENST00000544454 RUNDC1Q96C34 613 aa18.12■□□□□ 0.49
LTBR-213ENST00000544454 CEMIPQ8WUJ3 1361 aa18.12■□□□□ 0.49
LTBR-213ENST00000544454 MRS2Q9HD23 443 aa18.11■□□□□ 0.49
LTBR-213ENST00000544454 ITGB4P16144 1822 aa18.11■□□□□ 0.49
LTBR-213ENST00000544454 NUP188Q5SRE5 1749 aa18.1■□□□□ 0.49
LTBR-213ENST00000544454 PNISRQ8TF01 805 aaKnown RBP18.1■□□□□ 0.49
LTBR-213ENST00000544454 AKT1S1Q96B36 256 aa18.1■□□□□ 0.49
LTBR-213ENST00000544454 MRC1P22897 1456 aa18.09■□□□□ 0.49
LTBR-213ENST00000544454 ATP6V1AP38606 617 aa18.09■□□□□ 0.49
LTBR-213ENST00000544454 MCM10Q7L590 875 aa18.09■□□□□ 0.49
LTBR-213ENST00000544454 CCDC146Q8IYE0 955 aa18.09■□□□□ 0.49
LTBR-213ENST00000544454 ADAMTS7Q9UKP4 1686 aa18.09■□□□□ 0.49
LTBR-213ENST00000544454 TMPOP42166 694 aaKnown RBP18.08■□□□□ 0.48
LTBR-213ENST00000544454 RBM42Q9BTD8 480 aaKnown RBP18.08■□□□□ 0.48
LTBR-213ENST00000544454 SCN11AQ9UI33 1791 aa18.07■□□□□ 0.48
LTBR-213ENST00000544454 LY75O60449 1722 aa18.07■□□□□ 0.48
LTBR-213ENST00000544454 PTCD1O75127 700 aaKnown RBP18.07■□□□□ 0.48
LTBR-213ENST00000544454 RIPK4P57078 832 aa18.07■□□□□ 0.48
LTBR-213ENST00000544454 DCTN1Q14203 1278 aa18.07■□□□□ 0.48
LTBR-213ENST00000544454 ZNF827Q17R98 1081 aa18.07■□□□□ 0.48
LTBR-213ENST00000544454 SLC4A9Q96Q91 983 aa18.07■□□□□ 0.48
LTBR-213ENST00000544454 SLC39A6Q13433 755 aa18.06■□□□□ 0.48
LTBR-213ENST00000544454 ITPK1Q13572 414 aa18.06■□□□□ 0.48
LTBR-213ENST00000544454 SRCAPQ6ZRS2 3230 aa18.06■□□□□ 0.48
LTBR-213ENST00000544454 BTBD11A6QL63 1104 aa18.05■□□□□ 0.48
LTBR-213ENST00000544454 LMOD3Q0VAK6 560 aa18.05■□□□□ 0.48
LTBR-213ENST00000544454 TAF7Q15545 349 aaPredicted RBP18.05■□□□□ 0.48
LTBR-213ENST00000544454 ZNF790Q6PG37 636 aa18.05■□□□□ 0.48
LTBR-213ENST00000544454 TTC5Q8N0Z6 440 aa18.05■□□□□ 0.48
LTBR-213ENST00000544454 TFCP2L1Q9NZI6 479 aa18.05■□□□□ 0.48
LTBR-213ENST00000544454 PAPPAQ13219 1627 aa18.04■□□□□ 0.48
LTBR-213ENST00000544454 VSIG10Q8N0Z9 540 aa18.03■□□□□ 0.48
LTBR-213ENST00000544454 LINC00116Q8NCU8 138 aa18.03■□□□□ 0.48
LTBR-213ENST00000544454 NEUROD2Q15784 382 aa18.02■□□□□ 0.48
LTBR-213ENST00000544454 RC3H1Q5TC82 1133 aaKnown RBP18.02■□□□□ 0.48
LTBR-213ENST00000544454 AK7Q96M32 723 aa18.02■□□□□ 0.48
LTBR-213ENST00000544454 RRP7AQ9Y3A4 280 aaKnown RBP18.02■□□□□ 0.48
LTBR-213ENST00000544454 APAF1O14727 1248 aa18.01■□□□□ 0.47
LTBR-213ENST00000544454 DIEXFQ68CQ4 756 aaKnown RBP18.01■□□□□ 0.47
LTBR-213ENST00000544454 FLAD1Q8NFF5 587 aa18.01■□□□□ 0.47
LTBR-213ENST00000544454 ZNF496Q96IT1 587 aaPredicted RBP18■□□□□ 0.47
LTBR-213ENST00000544454 FMNL2Q96PY5 1086 aa18■□□□□ 0.47
LTBR-213ENST00000544454 THUMPD2Q9BTF0 503 aaKnown RBP18■□□□□ 0.47
LTBR-213ENST00000544454 PDGFDQ9GZP0 370 aaPredicted RBP18■□□□□ 0.47
LTBR-213ENST00000544454 TRIM35Q9UPQ4 493 aa18■□□□□ 0.47
LTBR-213ENST00000544454 PNPLA7Q6ZV29 1317 aa17.99■□□□□ 0.47
LTBR-213ENST00000544454 SLC16A10Q8TF71 515 aa17.99■□□□□ 0.47
LTBR-213ENST00000544454 TEX13AQ9BXU3 409 aaPredicted RBP17.99■□□□□ 0.47
LTBR-213ENST00000544454 CNTNAP4Q9C0A0 1308 aa17.98■□□□□ 0.47
LTBR-213ENST00000544454 CCER2I3L3R5 266 aa17.98■□□□□ 0.47
LTBR-213ENST00000544454 KCNQ3O43525 872 aa17.98■□□□□ 0.47
LTBR-213ENST00000544454 DNAJC10Q8IXB1 793 aa17.98■□□□□ 0.47
LTBR-213ENST00000544454 BABAM1Q9NWV8 329 aa17.98■□□□□ 0.47
LTBR-213ENST00000544454 ZNF831Q5JPB2 1677 aa17.98■□□□□ 0.47
LTBR-213ENST00000544454 KCPQ6ZWJ8 1503 aa17.98■□□□□ 0.47
LTBR-213ENST00000544454 GNPATO15228 680 aa17.97■□□□□ 0.47
LTBR-213ENST00000544454 STARD3NLO95772 234 aa17.97■□□□□ 0.47
LTBR-213ENST00000544454 CYP19A1P11511 503 aaPredicted RBP17.97■□□□□ 0.47
LTBR-213ENST00000544454 SSFA2P28290 1259 aa17.97■□□□□ 0.47
LTBR-213ENST00000544454 COL23A1Q86Y22 540 aaPredicted RBP17.97■□□□□ 0.47
LTBR-213ENST00000544454 SPON1Q9HCB6 807 aa17.97■□□□□ 0.47
LTBR-213ENST00000544454 MIS18AQ9NYP9 233 aa17.97■□□□□ 0.47
LTBR-213ENST00000544454 HEG1Q9ULI3 1381 aa17.96■□□□□ 0.47
LTBR-213ENST00000544454 CRKLP46109 303 aaKnown RBP17.96■□□□□ 0.47
LTBR-213ENST00000544454 NCBP3Q53F19 620 aaKnown RBP17.96■□□□□ 0.47
LTBR-213ENST00000544454 MTFR1LQ9H019 292 aa17.96■□□□□ 0.47
LTBR-213ENST00000544454 RTCBQ9Y3I0 505 aaKnown RBP17.96■□□□□ 0.47
LTBR-213ENST00000544454 C5P01031 1676 aa17.96■□□□□ 0.47
LTBR-213ENST00000544454 C4BP0C0L5 1744 aa17.95■□□□□ 0.46
LTBR-213ENST00000544454 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.95■□□□□ 0.46
LTBR-213ENST00000544454 RPS6KA4O75676 772 aa17.95■□□□□ 0.46
LTBR-213ENST00000544454 ZBTB7AO95365 584 aa17.95■□□□□ 0.46
LTBR-213ENST00000544454 INTS5Q6P9B9 1019 aaKnown RBP17.95■□□□□ 0.46
LTBR-213ENST00000544454 FAM9BQ8IZU0 186 aa17.95■□□□□ 0.46
LTBR-213ENST00000544454 SIPA1L3O60292 1781 aaPredicted RBP17.94■□□□□ 0.46
LTBR-213ENST00000544454 MSH5O43196 834 aa17.94■□□□□ 0.46
LTBR-213ENST00000544454 SNRPA1P09661 255 aaKnown RBP17.94■□□□□ 0.46
LTBR-213ENST00000544454 ADRA2BP18089 450 aa17.94■□□□□ 0.46
LTBR-213ENST00000544454 TRAPPC3LQ5T215 181 aa17.94■□□□□ 0.46
LTBR-213ENST00000544454 AMIGO3Q86WK7 504 aa17.94■□□□□ 0.46
LTBR-213ENST00000544454 CCDC87Q9NVE4 849 aa17.94■□□□□ 0.46
LTBR-213ENST00000544454 CALD1Q05682 793 aaKnown RBP17.93■□□□□ 0.46
LTBR-213ENST00000544454 CCDC27Q2M243 656 aa17.93■□□□□ 0.46
LTBR-213ENST00000544454 TSPYL4Q9UJ04 414 aa17.93■□□□□ 0.46
LTBR-213ENST00000544454 VIRMAQ69YN4 1812 aaKnown RBP17.93■□□□□ 0.46
LTBR-213ENST00000544454 TAF1LQ8IZX4 1826 aa17.93■□□□□ 0.46
LTBR-213ENST00000544454 DLG5Q8TDM6 1919 aa17.92■□□□□ 0.46
LTBR-213ENST00000544454 CHL1O00533 1208 aa17.92■□□□□ 0.46
LTBR-213ENST00000544454 PHF14O94880 888 aa17.92■□□□□ 0.46
LTBR-213ENST00000544454 EIF4A1P60842 406 aaKnown RBP17.92■□□□□ 0.46
LTBR-213ENST00000544454 ATF5Q9Y2D1 282 aaPredicted RBP17.92■□□□□ 0.46
LTBR-213ENST00000544454 SMIM5Q71RC9 77 aa17.91■□□□□ 0.46
LTBR-213ENST00000544454 ARHGEF1Q92888 912 aaKnown RBP17.91■□□□□ 0.46
LTBR-213ENST00000544454 CASZ1Q86V15 1759 aa17.91■□□□□ 0.46
LTBR-213ENST00000544454 CICQ96RK0 1608 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms