RNA–Protein interactions for RNA: ENST00000544336.5

PDCD2-211, Transcript of programmed cell death 2, humanhuman

TSL 1 (best)

Gene PDCD2, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-211ENST00000544336 GRIN3BO60391 1043 aa37.63■■■■□ 3.61
PDCD2-211ENST00000544336 PLEKHG2Q9H7P9 1386 aa37.63■■■■□ 3.61
PDCD2-211ENST00000544336 PLEKHO1Q53GL0 409 aaPredicted RBP37.62■■■■□ 3.61
PDCD2-211ENST00000544336 ZNF530Q6P9A1 599 aaPredicted RBP37.61■■■■□ 3.61
PDCD2-211ENST00000544336 AEBP1Q8IUX7 1158 aa37.6■■■■□ 3.61
PDCD2-211ENST00000544336 KNSTRNQ9Y448 316 aa37.59■■■■□ 3.61
PDCD2-211ENST00000544336 ERVV-2B6SEH9 535 aa37.58■■■■□ 3.61
PDCD2-211ENST00000544336 HSP90AB1P08238 724 aaKnown RBP37.58■■■■□ 3.61
PDCD2-211ENST00000544336 DCAF5Q96JK2 942 aa37.58■■■■□ 3.61
PDCD2-211ENST00000544336 RBM42Q9BTD8 480 aaKnown RBP37.58■■■■□ 3.61
PDCD2-211ENST00000544336 KDRP35968 1356 aa37.56■■■■□ 3.6
PDCD2-211ENST00000544336 KDM6AO15550 1401 aaPredicted RBP37.56■■■■□ 3.6
PDCD2-211ENST00000544336 WWC3Q9ULE0 1092 aa37.55■■■■□ 3.6
PDCD2-211ENST00000544336 AMOTQ4VCS5 1084 aa37.54■■■■□ 3.6
PDCD2-211ENST00000544336 CABP4P57796 275 aa37.53■■■■□ 3.6
PDCD2-211ENST00000544336 C1QTNF8P60827 252 aa37.53■■■■□ 3.6
PDCD2-211ENST00000544336 SLC4A9Q96Q91 983 aa37.53■■■■□ 3.6
PDCD2-211ENST00000544336 C1orf141Q5JVX7 400 aa37.51■■■■□ 3.6
PDCD2-211ENST00000544336 SULT6B1Q6IMI4 303 aa37.51■■■■□ 3.6
PDCD2-211ENST00000544336 ZNF831Q5JPB2 1677 aa37.5■■■■□ 3.59
PDCD2-211ENST00000544336 COL5A3P25940 1745 aaPredicted RBP37.5■■■■□ 3.59
PDCD2-211ENST00000544336 GIGYF1O75420 1035 aaPredicted RBP37.49■■■■□ 3.59
PDCD2-211ENST00000544336 MTHFSP49914 203 aa37.49■■■■□ 3.59
PDCD2-211ENST00000544336 RTCBQ9Y3I0 505 aaKnown RBP37.49■■■■□ 3.59
PDCD2-211ENST00000544336 SENP3-EIF4A1A0A087X0R7 540 aa37.47■■■■□ 3.59
PDCD2-211ENST00000544336 KIF7Q2M1P5 1343 aa37.46■■■■□ 3.59
PDCD2-211ENST00000544336 TRAPPC3LQ5T215 181 aa37.46■■■■□ 3.59
PDCD2-211ENST00000544336 MMP10P09238 476 aa37.45■■■■□ 3.59
PDCD2-211ENST00000544336 IL13P35225 146 aa37.45■■■■□ 3.59
PDCD2-211ENST00000544336 AMER1Q5JTC6 1135 aaPredicted RBP37.44■■■■□ 3.58
PDCD2-211ENST00000544336 PTCD1O75127 700 aaKnown RBP37.42■■■■□ 3.58
PDCD2-211ENST00000544336 NFATC2IPQ8NCF5 419 aa37.42■■■■□ 3.58
PDCD2-211ENST00000544336 RC3H1Q5TC82 1133 aaKnown RBP37.41■■■■□ 3.58
PDCD2-211ENST00000544336 ATP10DQ9P241 1426 aa37.41■■■■□ 3.58
PDCD2-211ENST00000544336 MYH14Q7Z406 1995 aaKnown RBP37.4■■■■□ 3.58
PDCD2-211ENST00000544336 CNTNAP4Q9C0A0 1308 aa37.4■■■■□ 3.58
PDCD2-211ENST00000544336 CICQ96RK0 1608 aaPredicted RBP37.4■■■■□ 3.58
PDCD2-211ENST00000544336 SCN11AQ9UI33 1791 aa37.4■■■■□ 3.58
PDCD2-211ENST00000544336 ARHGEF1Q92888 912 aaKnown RBP37.4■■■■□ 3.58
PDCD2-211ENST00000544336 C4AP0C0L4 1744 aa37.37■■■■□ 3.57
PDCD2-211ENST00000544336 RPS6KA4O75676 772 aa37.36■■■■□ 3.57
PDCD2-211ENST00000544336 ADRA2BP18089 450 aa37.36■■■■□ 3.57
PDCD2-211ENST00000544336 RFC4P35249 363 aa37.36■■■■□ 3.57
PDCD2-211ENST00000544336 N4BP2Q86UW6 1770 aaPredicted RBP37.35■■■■□ 3.57
PDCD2-211ENST00000544336 NLGN1Q8N2Q7 840 aa37.35■■■■□ 3.57
PDCD2-211ENST00000544336 KIF13BQ9NQT8 1826 aa37.35■■■■□ 3.57
PDCD2-211ENST00000544336 TJP1Q07157 1748 aa37.34■■■■□ 3.57
PDCD2-211ENST00000544336 HMOX1P09601 288 aa37.33■■■■□ 3.57
PDCD2-211ENST00000544336 CC2D1BQ5T0F9 858 aaKnown RBP37.33■■■■□ 3.57
PDCD2-211ENST00000544336 KIAA1551Q9HCM1 1747 aa37.33■■■■□ 3.57
PDCD2-211ENST00000544336 GYS1P13807 737 aa37.32■■■■□ 3.56
PDCD2-211ENST00000544336 PXDNLA1KZ92 1463 aa37.32■■■■□ 3.56
PDCD2-211ENST00000544336 VIRMAQ69YN4 1812 aaKnown RBP37.31■■■■□ 3.56
PDCD2-211ENST00000544336 CRKLP46109 303 aaKnown RBP37.31■■■■□ 3.56
PDCD2-211ENST00000544336 AKAP4Q5JQC9 854 aa37.31■■■■□ 3.56
PDCD2-211ENST00000544336 ZNF526Q8TF50 670 aaPredicted RBP37.31■■■■□ 3.56
PDCD2-211ENST00000544336 ADCY9O60503 1353 aa37.29■■■■□ 3.56
PDCD2-211ENST00000544336 CNGB1Q14028 1251 aaPredicted RBP37.28■■■■□ 3.56
PDCD2-211ENST00000544336 LGR6Q9HBX8 967 aa37.28■■■■□ 3.56
PDCD2-211ENST00000544336 C10orf71Q711Q0 1435 aa37.27■■■■□ 3.56
PDCD2-211ENST00000544336 GPBP1L1Q9HC44 474 aaPredicted RBP37.27■■■■□ 3.56
PDCD2-211ENST00000544336 A0A0G2JLW4 131 aa37.26■■■■□ 3.56
PDCD2-211ENST00000544336 PER1O15534 1290 aaPredicted RBP37.26■■■■□ 3.56
PDCD2-211ENST00000544336 CCDC87Q9NVE4 849 aa37.26■■■■□ 3.56
PDCD2-211ENST00000544336 PARP3Q9Y6F1 533 aa37.26■■■■□ 3.56
PDCD2-211ENST00000544336 SLC52A2Q9HAB3 445 aa37.25■■■■□ 3.55
PDCD2-211ENST00000544336 SRP68Q9UHB9 627 aaKnown RBP37.25■■■■□ 3.55
PDCD2-211ENST00000544336 TGFB2P61812 414 aa37.24■■■■□ 3.55
PDCD2-211ENST00000544336 DIAPH1O60610 1272 aaKnown RBP37.23■■■■□ 3.55
PDCD2-211ENST00000544336 BCS1LQ9Y276 419 aa37.23■■■■□ 3.55
PDCD2-211ENST00000544336 RNMTO43148 476 aaKnown RBP37.22■■■■□ 3.55
PDCD2-211ENST00000544336 DPEP1P16444 411 aa37.2■■■■□ 3.55
PDCD2-211ENST00000544336 SLC39A6Q13433 755 aa37.2■■■■□ 3.55
PDCD2-211ENST00000544336 MTHFSDQ2M296 383 aaKnown RBP37.2■■■■□ 3.55
PDCD2-211ENST00000544336 DNAJC10Q8IXB1 793 aa37.2■■■■□ 3.55
PDCD2-211ENST00000544336 MRC1P22897 1456 aa37.2■■■■□ 3.54
PDCD2-211ENST00000544336 INTS5Q6P9B9 1019 aaKnown RBP37.19■■■■□ 3.54
PDCD2-211ENST00000544336 USP42Q9H9J4 1324 aaKnown RBP37.18■■■■□ 3.54
PDCD2-211ENST00000544336 FKBP8Q14318 412 aa37.18■■■■□ 3.54
PDCD2-211ENST00000544336 BRCA1P38398 1863 aaKnown RBP37.16■■■■□ 3.54
PDCD2-211ENST00000544336 ADAMTS7Q9UKP4 1686 aa37.15■■■■□ 3.54
PDCD2-211ENST00000544336 DDR1Q08345 913 aa37.13■■■■□ 3.53
PDCD2-211ENST00000544336 KCPQ6ZWJ8 1503 aa37.13■■■■□ 3.53
PDCD2-211ENST00000544336 FCHSD2O94868 740 aa37.12■■■■□ 3.53
PDCD2-211ENST00000544336 U2SURPO15042 1029 aaKnown RBP37.11■■■■□ 3.53
PDCD2-211ENST00000544336 ARHGAP27Q6ZUM4 889 aa37.11■■■■□ 3.53
PDCD2-211ENST00000544336 COL3A1P02461 1466 aaPredicted RBP37.11■■■■□ 3.53
PDCD2-211ENST00000544336 ZPR1O75312 459 aa37.09■■■■□ 3.53
PDCD2-211ENST00000544336 CYP19A1P11511 503 aaPredicted RBP37.09■■■■□ 3.53
PDCD2-211ENST00000544336 USPL1Q5W0Q7 1092 aa37.09■■■■□ 3.53
PDCD2-211ENST00000544336 SOS1Q07889 1333 aaPredicted RBP37.09■■■■□ 3.53
PDCD2-211ENST00000544336 KCNA3P22001 575 aa37.07■■■■□ 3.52
PDCD2-211ENST00000544336 NPC1L1Q9UHC9 1359 aa37.06■■■■□ 3.52
PDCD2-211ENST00000544336 UBR2Q8IWV8 1755 aa37.05■■■■□ 3.52
PDCD2-211ENST00000544336 ZBTB1Q9Y2K1 713 aa37.05■■■■□ 3.52
PDCD2-211ENST00000544336 ARFGEF1Q9Y6D6 1849 aa37.05■■■■□ 3.52
PDCD2-211ENST00000544336 POLRMTO00411 1230 aaKnown RBP37.04■■■■□ 3.52
PDCD2-211ENST00000544336 COL15A1P39059 1388 aa37.04■■■■□ 3.52
PDCD2-211ENST00000544336 PIM2Q9P1W9 311 aa37.03■■■■□ 3.52
PDCD2-211ENST00000544336 TM4SF1P30408 202 aa37.02■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms