RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 AK7Q96M32 723 aa31.18■■■□□ 2.58
CHFR-222ENST00000544093 ATP6V1AP38606 617 aa31.17■■■□□ 2.58
CHFR-222ENST00000544093 SGIP1Q9BQI5 828 aa31.17■■■□□ 2.58
CHFR-222ENST00000544093 COL24A1Q17RW2 1714 aa31.17■■■□□ 2.58
CHFR-222ENST00000544093 MTHFSDQ2M296 383 aaKnown RBP31.16■■■□□ 2.58
CHFR-222ENST00000544093 VIRMAQ69YN4 1812 aaKnown RBP31.16■■■□□ 2.58
CHFR-222ENST00000544093 NFATC2IPQ8NCF5 419 aa31.15■■■□□ 2.58
CHFR-222ENST00000544093 GAS2L2Q8NHY3 880 aa31.15■■■□□ 2.58
CHFR-222ENST00000544093 ADAMTS7Q9UKP4 1686 aa31.14■■■□□ 2.58
CHFR-222ENST00000544093 POLD1P28340 1107 aa31.14■■■□□ 2.58
CHFR-222ENST00000544093 MRC1P22897 1456 aa31.14■■■□□ 2.57
CHFR-222ENST00000544093 UBR3Q6ZT12 1888 aa31.13■■■□□ 2.57
CHFR-222ENST00000544093 MSH5O43196 834 aa31.12■■■□□ 2.57
CHFR-222ENST00000544093 COL23A1Q86Y22 540 aaPredicted RBP31.12■■■□□ 2.57
CHFR-222ENST00000544093 SLC52A2Q9HAB3 445 aa31.12■■■□□ 2.57
CHFR-222ENST00000544093 RNMTO43148 476 aaKnown RBP31.11■■■□□ 2.57
CHFR-222ENST00000544093 LINC00116Q8NCU8 138 aa31.11■■■□□ 2.57
CHFR-222ENST00000544093 ARXQ96QS3 562 aa31.11■■■□□ 2.57
CHFR-222ENST00000544093 RBM42Q9BTD8 480 aaKnown RBP31.11■■■□□ 2.57
CHFR-222ENST00000544093 ITPK1Q13572 414 aa31.1■■■□□ 2.57
CHFR-222ENST00000544093 U2AF1L5P0DN76 240 aaPredicted RBP31.09■■■□□ 2.57
CHFR-222ENST00000544093 SSFA2P28290 1259 aa31.09■■■□□ 2.57
CHFR-222ENST00000544093 U2AF1Q01081 240 aaKnown RBP eCLIP31.09■■■□□ 2.57
CHFR-222ENST00000544093 RALBP1Q15311 655 aa31.09■■■□□ 2.57
CHFR-222ENST00000544093 RSPH6AQ9H0K4 717 aa31.09■■■□□ 2.57
CHFR-222ENST00000544093 MAP3K5Q99683 1374 aa31.08■■■□□ 2.57
CHFR-222ENST00000544093 FCHSD2O94868 740 aa31.08■■■□□ 2.57
CHFR-222ENST00000544093 LGR6Q9HBX8 967 aa31.08■■■□□ 2.57
CHFR-222ENST00000544093 COL5A3P25940 1745 aaPredicted RBP31.07■■■□□ 2.56
CHFR-222ENST00000544093 DCAF8L1A6NGE4 600 aa31.07■■■□□ 2.56
CHFR-222ENST00000544093 PRKAR2BP31323 418 aa31.07■■■□□ 2.56
CHFR-222ENST00000544093 DDX10Q13206 875 aaKnown RBP31.07■■■□□ 2.56
CHFR-222ENST00000544093 CICQ96RK0 1608 aaPredicted RBP31.06■■■□□ 2.56
CHFR-222ENST00000544093 GNAT3A8MTJ3 354 aa31.06■■■□□ 2.56
CHFR-222ENST00000544093 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.04■■■□□ 2.56
CHFR-222ENST00000544093 GNPATO15228 680 aa31.04■■■□□ 2.56
CHFR-222ENST00000544093 RC3H1Q5TC82 1133 aaKnown RBP31.04■■■□□ 2.56
CHFR-222ENST00000544093 SLC4A9Q96Q91 983 aa31.04■■■□□ 2.56
CHFR-222ENST00000544093 FHDC1Q9C0D6 1143 aaPredicted RBP31.04■■■□□ 2.56
CHFR-222ENST00000544093 PTCD1O75127 700 aaKnown RBP31.03■■■□□ 2.56
CHFR-222ENST00000544093 CNTNAP4Q9C0A0 1308 aa31.02■■■□□ 2.56
CHFR-222ENST00000544093 PHF14O94880 888 aa31.01■■■□□ 2.55
CHFR-222ENST00000544093 SYT17Q9BSW7 474 aa31.01■■■□□ 2.55
CHFR-222ENST00000544093 PHACTR3Q96KR7 559 aa31■■■□□ 2.55
CHFR-222ENST00000544093 RTCBQ9Y3I0 505 aaKnown RBP31■■■□□ 2.55
CHFR-222ENST00000544093 NEFMP07197 916 aa30.99■■■□□ 2.55
CHFR-222ENST00000544093 ADRA2BP18089 450 aa30.99■■■□□ 2.55
CHFR-222ENST00000544093 TEFQ10587 303 aa30.99■■■□□ 2.55
CHFR-222ENST00000544093 AMIGO3Q86WK7 504 aa30.97■■■□□ 2.55
CHFR-222ENST00000544093 TJP1Q07157 1748 aa30.97■■■□□ 2.55
CHFR-222ENST00000544093 TRAPPC3LQ5T215 181 aa30.96■■■□□ 2.55
CHFR-222ENST00000544093 PNNQ9H307 717 aaKnown RBP30.96■■■□□ 2.55
CHFR-222ENST00000544093 CEMIPQ8WUJ3 1361 aa30.95■■■□□ 2.55
CHFR-222ENST00000544093 SIPA1L3O60292 1781 aaPredicted RBP30.95■■■□□ 2.55
CHFR-222ENST00000544093 IL17REQ8NFR9 667 aa30.95■■■□□ 2.55
CHFR-222ENST00000544093 UBR2Q8IWV8 1755 aa30.94■■■□□ 2.54
CHFR-222ENST00000544093 RPS6KA4O75676 772 aa30.94■■■□□ 2.54
CHFR-222ENST00000544093 MSL1Q68DK7 614 aa30.94■■■□□ 2.54
CHFR-222ENST00000544093 TTC5Q8N0Z6 440 aa30.94■■■□□ 2.54
CHFR-222ENST00000544093 VSIG10Q8N0Z9 540 aa30.94■■■□□ 2.54
CHFR-222ENST00000544093 MYH14Q7Z406 1995 aaKnown RBP30.94■■■□□ 2.54
CHFR-222ENST00000544093 KCPQ6ZWJ8 1503 aa30.93■■■□□ 2.54
CHFR-222ENST00000544093 RTF1Q92541 710 aaKnown RBP30.93■■■□□ 2.54
CHFR-222ENST00000544093 MYBBP1AQ9BQG0 1328 aaKnown RBP30.93■■■□□ 2.54
CHFR-222ENST00000544093 SLC39A6Q13433 755 aa30.92■■■□□ 2.54
CHFR-222ENST00000544093 HTATSF1O43719 755 aaKnown RBP30.91■■■□□ 2.54
CHFR-222ENST00000544093 CRKLP46109 303 aaKnown RBP30.91■■■□□ 2.54
CHFR-222ENST00000544093 SMIM5Q71RC9 77 aa30.88■■■□□ 2.53
CHFR-222ENST00000544093 KLHL34Q8N239 644 aa30.88■■■□□ 2.53
CHFR-222ENST00000544093 RFC4P35249 363 aa30.87■■■□□ 2.53
CHFR-222ENST00000544093 ZNF790Q6PG37 636 aa30.87■■■□□ 2.53
CHFR-222ENST00000544093 DNAJC10Q8IXB1 793 aa30.87■■■□□ 2.53
CHFR-222ENST00000544093 ARHGEF1Q92888 912 aaKnown RBP30.86■■■□□ 2.53
CHFR-222ENST00000544093 NLGN1Q8N2Q7 840 aa30.85■■■□□ 2.53
CHFR-222ENST00000544093 CCDC87Q9NVE4 849 aa30.85■■■□□ 2.53
CHFR-222ENST00000544093 CD2APQ9Y5K6 639 aa30.85■■■□□ 2.53
CHFR-222ENST00000544093 C4AP0C0L4 1744 aa30.84■■■□□ 2.53
CHFR-222ENST00000544093 MAPK8IP3Q9UPT6 1336 aa30.84■■■□□ 2.53
CHFR-222ENST00000544093 TEX13AQ9BXU3 409 aaPredicted RBP30.84■■■□□ 2.53
CHFR-222ENST00000544093 BTBD11A6QL63 1104 aa30.83■■■□□ 2.53
CHFR-222ENST00000544093 CYP19A1P11511 503 aaPredicted RBP30.83■■■□□ 2.53
CHFR-222ENST00000544093 INTS5Q6P9B9 1019 aaKnown RBP30.83■■■□□ 2.53
CHFR-222ENST00000544093 PLEKHF1Q96S99 279 aa30.83■■■□□ 2.53
CHFR-222ENST00000544093 STARD3NLO95772 234 aa30.82■■■□□ 2.52
CHFR-222ENST00000544093 HEG1Q9ULI3 1381 aa30.81■■■□□ 2.52
CHFR-222ENST00000544093 FMNL2Q96PY5 1086 aa30.81■■■□□ 2.52
CHFR-222ENST00000544093 DLG5Q8TDM6 1919 aa30.81■■■□□ 2.52
CHFR-222ENST00000544093 MCM10Q7L590 875 aa30.8■■■□□ 2.52
CHFR-222ENST00000544093 ZNF496Q96IT1 587 aaPredicted RBP30.8■■■□□ 2.52
CHFR-222ENST00000544093 PRKRIP1Q9H875 184 aaPredicted RBP30.79■■■□□ 2.52
CHFR-222ENST00000544093 GYS1P13807 737 aa30.78■■■□□ 2.52
CHFR-222ENST00000544093 NFE2L2Q16236 605 aa30.78■■■□□ 2.52
CHFR-222ENST00000544093 SOS1Q07889 1333 aaPredicted RBP30.77■■■□□ 2.52
CHFR-222ENST00000544093 USP42Q9H9J4 1324 aaKnown RBP30.77■■■□□ 2.52
CHFR-222ENST00000544093 MMP10P09238 476 aa30.77■■■□□ 2.52
CHFR-222ENST00000544093 NLGN2Q8NFZ4 835 aa30.75■■■□□ 2.51
CHFR-222ENST00000544093 ZPR1O75312 459 aa30.74■■■□□ 2.51
CHFR-222ENST00000544093 GPR162Q16538 588 aa30.74■■■□□ 2.51
CHFR-222ENST00000544093 DCTN1Q14203 1278 aa30.73■■■□□ 2.51
CHFR-222ENST00000544093 TAF7Q15545 349 aaPredicted RBP30.73■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms