RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 ITPK1Q13572 414 aa16.37■□□□□ 0.21
GABPB1-206ENST00000543881 TMOD3Q9NYL9 352 aa16.37■□□□□ 0.21
GABPB1-206ENST00000543881 ASAP1Q9ULH1 1129 aa16.37■□□□□ 0.21
GABPB1-206ENST00000543881 NCAPD2Q15021 1401 aa16.37■□□□□ 0.21
GABPB1-206ENST00000543881 ATP6V1AP38606 617 aa16.36■□□□□ 0.21
GABPB1-206ENST00000543881 POLKQ9UBT6 870 aa16.36■□□□□ 0.21
GABPB1-206ENST00000543881 WASHC2AQ641Q2 1341 aa16.36■□□□□ 0.21
GABPB1-206ENST00000543881 KIF13BQ9NQT8 1826 aa16.36■□□□□ 0.21
GABPB1-206ENST00000543881 PXDNLA1KZ92 1463 aa16.36■□□□□ 0.21
GABPB1-206ENST00000543881 PANK3Q9H999 370 aa16.35■□□□□ 0.21
GABPB1-206ENST00000543881 N4BP2Q86UW6 1770 aaPredicted RBP16.35■□□□□ 0.21
GABPB1-206ENST00000543881 TOMM70O94826 608 aa16.35■□□□□ 0.21
GABPB1-206ENST00000543881 KIAA1551Q9HCM1 1747 aa16.34■□□□□ 0.21
GABPB1-206ENST00000543881 TGFB2P61812 414 aa16.34■□□□□ 0.21
GABPB1-206ENST00000543881 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.34■□□□□ 0.21
GABPB1-206ENST00000543881 BCS1LQ9Y276 419 aa16.34■□□□□ 0.21
GABPB1-206ENST00000543881 A0A0G2JLW4 131 aa16.33■□□□□ 0.2
GABPB1-206ENST00000543881 TNNT2P45379 298 aaPredicted RBP16.33■□□□□ 0.2
GABPB1-206ENST00000543881 DNAJC5GQ8N7S2 189 aa16.33■□□□□ 0.2
GABPB1-206ENST00000543881 EYA1Q99502 592 aa16.33■□□□□ 0.2
GABPB1-206ENST00000543881 ATG3Q9NT62 314 aa16.33■□□□□ 0.2
GABPB1-206ENST00000543881 PHKG2P15735 406 aa16.32■□□□□ 0.2
GABPB1-206ENST00000543881 IFNL2Q8IZJ0 200 aa16.32■□□□□ 0.2
GABPB1-206ENST00000543881 TRAPPC3LQ5T215 181 aa16.31■□□□□ 0.2
GABPB1-206ENST00000543881 ARHGAP27Q6ZUM4 889 aa16.31■□□□□ 0.2
GABPB1-206ENST00000543881 NLGN1Q8N2Q7 840 aa16.31■□□□□ 0.2
GABPB1-206ENST00000543881 RTCBQ9Y3I0 505 aaKnown RBP16.31■□□□□ 0.2
GABPB1-206ENST00000543881 C10orf71Q711Q0 1435 aa16.3■□□□□ 0.2
GABPB1-206ENST00000543881 NMRK2Q9NPI5 230 aa16.3■□□□□ 0.2
GABPB1-206ENST00000543881 EIF4A2Q14240 407 aaKnown RBP16.29■□□□□ 0.2
GABPB1-206ENST00000543881 KDRP35968 1356 aa16.29■□□□□ 0.2
GABPB1-206ENST00000543881 FCHSD2O94868 740 aa16.29■□□□□ 0.2
GABPB1-206ENST00000543881 DPEP1P16444 411 aa16.29■□□□□ 0.2
GABPB1-206ENST00000543881 ARHGEF1Q92888 912 aaKnown RBP16.29■□□□□ 0.2
GABPB1-206ENST00000543881 CCDC87Q9NVE4 849 aa16.29■□□□□ 0.2
GABPB1-206ENST00000543881 SLC4A9Q96Q91 983 aa16.28■□□□□ 0.2
GABPB1-206ENST00000543881 RBM42Q9BTD8 480 aaKnown RBP16.28■□□□□ 0.2
GABPB1-206ENST00000543881 BRCA1P38398 1863 aaKnown RBP16.28■□□□□ 0.2
GABPB1-206ENST00000543881 C4AP0C0L4 1744 aa16.27■□□□□ 0.2
GABPB1-206ENST00000543881 GYS1P13807 737 aa16.27■□□□□ 0.19
GABPB1-206ENST00000543881 ADRA2BP18089 450 aa16.27■□□□□ 0.19
GABPB1-206ENST00000543881 WDR90Q96KV7 1748 aa16.27■□□□□ 0.19
GABPB1-206ENST00000543881 ZNF831Q5JPB2 1677 aa16.27■□□□□ 0.19
GABPB1-206ENST00000543881 RFC4P35249 363 aa16.26■□□□□ 0.19
GABPB1-206ENST00000543881 RC3H1Q5TC82 1133 aaKnown RBP16.26■□□□□ 0.19
GABPB1-206ENST00000543881 C9orf131Q5VYM1 1079 aa16.26■□□□□ 0.19
GABPB1-206ENST00000543881 RBM46Q8TBY0 533 aaKnown RBP16.26■□□□□ 0.19
GABPB1-206ENST00000543881 PARP3Q9Y6F1 533 aa16.26■□□□□ 0.19
GABPB1-206ENST00000543881 COL5A3P25940 1745 aaPredicted RBP16.25■□□□□ 0.19
GABPB1-206ENST00000543881 RPS6KA4O75676 772 aa16.25■□□□□ 0.19
GABPB1-206ENST00000543881 ARFGEF1Q9Y6D6 1849 aa16.24■□□□□ 0.19
GABPB1-206ENST00000543881 CNTNAP4Q9C0A0 1308 aa16.24■□□□□ 0.19
GABPB1-206ENST00000543881 ERVV-2B6SEH9 535 aa16.24■□□□□ 0.19
GABPB1-206ENST00000543881 KCNA3P22001 575 aa16.24■□□□□ 0.19
GABPB1-206ENST00000543881 C16orf71Q8IYS4 520 aaPredicted RBP16.24■□□□□ 0.19
GABPB1-206ENST00000543881 KIF7Q2M1P5 1343 aa16.24■□□□□ 0.19
GABPB1-206ENST00000543881 HTRA3P83110 453 aa16.23■□□□□ 0.19
GABPB1-206ENST00000543881 MORC1Q86VD1 984 aa16.23■□□□□ 0.19
GABPB1-206ENST00000543881 PLEKHG2Q9H7P9 1386 aa16.23■□□□□ 0.19
GABPB1-206ENST00000543881 DCAF5Q96JK2 942 aa16.22■□□□□ 0.19
GABPB1-206ENST00000543881 PIM2Q9P1W9 311 aa16.22■□□□□ 0.19
GABPB1-206ENST00000543881 MYH14Q7Z406 1995 aaKnown RBP16.22■□□□□ 0.19
GABPB1-206ENST00000543881 HSP90AB1P08238 724 aaKnown RBP16.22■□□□□ 0.19
GABPB1-206ENST00000543881 AMER1Q5JTC6 1135 aaPredicted RBP16.22■□□□□ 0.19
GABPB1-206ENST00000543881 KLRG1Q96E93 195 aa16.22■□□□□ 0.19
GABPB1-206ENST00000543881 KNSTRNQ9Y448 316 aa16.22■□□□□ 0.19
GABPB1-206ENST00000543881 KCPQ6ZWJ8 1503 aa16.21■□□□□ 0.19
GABPB1-206ENST00000543881 FSTL1Q12841 308 aa16.21■□□□□ 0.19
GABPB1-206ENST00000543881 KDM2BQ8NHM5 1336 aa16.2■□□□□ 0.18
GABPB1-206ENST00000543881 CABP4P57796 275 aa16.2■□□□□ 0.18
GABPB1-206ENST00000543881 DALRD3Q5D0E6 543 aaKnown RBP16.2■□□□□ 0.18
GABPB1-206ENST00000543881 COL13A1Q5TAT6 717 aaPredicted RBP16.2■□□□□ 0.18
GABPB1-206ENST00000543881 JMYQ8N9B5 988 aa16.2■□□□□ 0.18
GABPB1-206ENST00000543881 RNF181Q9P0P0 153 aa16.2■□□□□ 0.18
GABPB1-206ENST00000543881 PLEKHO1Q53GL0 409 aaPredicted RBP16.19■□□□□ 0.18
GABPB1-206ENST00000543881 AEBP1Q8IUX7 1158 aa16.19■□□□□ 0.18
GABPB1-206ENST00000543881 SRP68Q9UHB9 627 aaKnown RBP16.19■□□□□ 0.18
GABPB1-206ENST00000543881 KDM6AO15550 1401 aaPredicted RBP16.19■□□□□ 0.18
GABPB1-206ENST00000543881 PTCD1O75127 700 aaKnown RBP16.18■□□□□ 0.18
GABPB1-206ENST00000543881 CRKLP46109 303 aaKnown RBP16.18■□□□□ 0.18
GABPB1-206ENST00000543881 RRAGCQ9HB90 399 aa16.18■□□□□ 0.18
GABPB1-206ENST00000543881 PER1O15534 1290 aaPredicted RBP16.17■□□□□ 0.18
GABPB1-206ENST00000543881 DDR1Q08345 913 aa16.17■□□□□ 0.18
GABPB1-206ENST00000543881 FKBP8Q14318 412 aa16.17■□□□□ 0.18
GABPB1-206ENST00000543881 ZNF530Q6P9A1 599 aaPredicted RBP16.17■□□□□ 0.18
GABPB1-206ENST00000543881 SBF1O95248 1867 aa16.17■□□□□ 0.18
GABPB1-206ENST00000543881 USP42Q9H9J4 1324 aaKnown RBP16.17■□□□□ 0.18
GABPB1-206ENST00000543881 CHRNA5P30532 468 aa16.16■□□□□ 0.18
GABPB1-206ENST00000543881 IL13P35225 146 aa16.16■□□□□ 0.18
GABPB1-206ENST00000543881 TNRC6CQ9HCJ0 1690 aaKnown RBP16.16■□□□□ 0.18
GABPB1-206ENST00000543881 MTHFSP49914 203 aa16.16■□□□□ 0.18
GABPB1-206ENST00000543881 AMOTQ4VCS5 1084 aa16.16■□□□□ 0.18
GABPB1-206ENST00000543881 NFATC2IPQ8NCF5 419 aa16.15■□□□□ 0.18
GABPB1-206ENST00000543881 SULT6B1Q6IMI4 303 aa16.14■□□□□ 0.17
GABPB1-206ENST00000543881 SMC1BQ8NDV3 1235 aa16.14■□□□□ 0.17
GABPB1-206ENST00000543881 TJP1Q07157 1748 aa16.13■□□□□ 0.17
GABPB1-206ENST00000543881 POLRMTO00411 1230 aaKnown RBP16.13■□□□□ 0.17
GABPB1-206ENST00000543881 CAPN15O75808 1086 aa16.13■□□□□ 0.17
GABPB1-206ENST00000543881 C1orf141Q5JVX7 400 aa16.13■□□□□ 0.17
GABPB1-206ENST00000543881 TM4SF1P30408 202 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms