RNA–Protein interactions for RNA: ENST00000543428.5

PSME3-204, Transcript of proteasome activator subunit 3, humanhuman

TSL 2

Gene PSME3, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-204ENST00000543428 MAP3K5Q99683 1374 aa29.02■■■□□ 2.24
PSME3-204ENST00000543428 DIAPH1O60610 1272 aaKnown RBP29.02■■■□□ 2.24
PSME3-204ENST00000543428 YY1P25490 414 aa29.02■■■□□ 2.24
PSME3-204ENST00000543428 MSL1Q68DK7 614 aa29.02■■■□□ 2.24
PSME3-204ENST00000543428 PHF14O94880 888 aa29.01■■■□□ 2.23
PSME3-204ENST00000543428 KDM6AO15550 1401 aaPredicted RBP29.01■■■□□ 2.23
PSME3-204ENST00000543428 HMOX1P09601 288 aa29■■■□□ 2.23
PSME3-204ENST00000543428 LINC00116Q8NCU8 138 aa29■■■□□ 2.23
PSME3-204ENST00000543428 RBM42Q9BTD8 480 aaKnown RBP29■■■□□ 2.23
PSME3-204ENST00000543428 ITPK1Q13572 414 aa28.98■■■□□ 2.23
PSME3-204ENST00000543428 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.97■■■□□ 2.23
PSME3-204ENST00000543428 UBR3Q6ZT12 1888 aa28.96■■■□□ 2.23
PSME3-204ENST00000543428 GNPATO15228 680 aa28.96■■■□□ 2.23
PSME3-204ENST00000543428 SSFA2P28290 1259 aa28.95■■■□□ 2.22
PSME3-204ENST00000543428 AKAP4Q5JQC9 854 aa28.95■■■□□ 2.22
PSME3-204ENST00000543428 SMIM5Q71RC9 77 aa28.94■■■□□ 2.22
PSME3-204ENST00000543428 AMIGO3Q86WK7 504 aa28.94■■■□□ 2.22
PSME3-204ENST00000543428 NFATC2IPQ8NCF5 419 aa28.94■■■□□ 2.22
PSME3-204ENST00000543428 U2SURPO15042 1029 aaKnown RBP28.92■■■□□ 2.22
PSME3-204ENST00000543428 GPR162Q16538 588 aa28.92■■■□□ 2.22
PSME3-204ENST00000543428 SCN11AQ9UI33 1791 aa28.9■■■□□ 2.22
PSME3-204ENST00000543428 PTCD1O75127 700 aaKnown RBP28.9■■■□□ 2.22
PSME3-204ENST00000543428 PELP1Q8IZL8 1130 aaKnown RBP28.9■■■□□ 2.22
PSME3-204ENST00000543428 CFAP53Q96M91 514 aa28.89■■■□□ 2.22
PSME3-204ENST00000543428 SLC4A9Q96Q91 983 aa28.89■■■□□ 2.22
PSME3-204ENST00000543428 ZNF831Q5JPB2 1677 aa28.89■■■□□ 2.21
PSME3-204ENST00000543428 NLGN2Q8NFZ4 835 aa28.88■■■□□ 2.21
PSME3-204ENST00000543428 RTCBQ9Y3I0 505 aaKnown RBP28.88■■■□□ 2.21
PSME3-204ENST00000543428 COL3A1P02461 1466 aaPredicted RBP28.87■■■□□ 2.21
PSME3-204ENST00000543428 MTHFSDQ2M296 383 aaKnown RBP28.87■■■□□ 2.21
PSME3-204ENST00000543428 LGR6Q9HBX8 967 aa28.86■■■□□ 2.21
PSME3-204ENST00000543428 RNMTO43148 476 aaKnown RBP28.85■■■□□ 2.21
PSME3-204ENST00000543428 RC3H1Q5TC82 1133 aaKnown RBP28.85■■■□□ 2.21
PSME3-204ENST00000543428 SLC52A2Q9HAB3 445 aa28.85■■■□□ 2.21
PSME3-204ENST00000543428 TRAPPC3LQ5T215 181 aa28.84■■■□□ 2.21
PSME3-204ENST00000543428 CNTNAP4Q9C0A0 1308 aa28.83■■■□□ 2.21
PSME3-204ENST00000543428 COL5A3P25940 1745 aaPredicted RBP28.83■■■□□ 2.21
PSME3-204ENST00000543428 CD2APQ9Y5K6 639 aa28.82■■■□□ 2.2
PSME3-204ENST00000543428 VIRMAQ69YN4 1812 aaKnown RBP28.8■■■□□ 2.2
PSME3-204ENST00000543428 ADRA2BP18089 450 aa28.8■■■□□ 2.2
PSME3-204ENST00000543428 NUDCQ9Y266 331 aa28.8■■■□□ 2.2
PSME3-204ENST00000543428 CHD4Q14839 1912 aa28.8■■■□□ 2.2
PSME3-204ENST00000543428 RPS6KA4O75676 772 aa28.79■■■□□ 2.2
PSME3-204ENST00000543428 PPP2R1AP30153 589 aa28.78■■■□□ 2.2
PSME3-204ENST00000543428 RFC4P35249 363 aa28.78■■■□□ 2.2
PSME3-204ENST00000543428 GAS2L2Q8NHY3 880 aa28.78■■■□□ 2.2
PSME3-204ENST00000543428 MRC1P22897 1456 aa28.78■■■□□ 2.2
PSME3-204ENST00000543428 CRKLP46109 303 aaKnown RBP28.77■■■□□ 2.2
PSME3-204ENST00000543428 ARHGEF1Q92888 912 aaKnown RBP28.77■■■□□ 2.2
PSME3-204ENST00000543428 SLC39A6Q13433 755 aa28.76■■■□□ 2.19
PSME3-204ENST00000543428 MMP10P09238 476 aa28.75■■■□□ 2.19
PSME3-204ENST00000543428 NLGN1Q8N2Q7 840 aa28.75■■■□□ 2.19
PSME3-204ENST00000543428 MYH14Q7Z406 1995 aaKnown RBP28.75■■■□□ 2.19
PSME3-204ENST00000543428 GNAT3A8MTJ3 354 aa28.74■■■□□ 2.19
PSME3-204ENST00000543428 TJP1Q07157 1748 aa28.74■■■□□ 2.19
PSME3-204ENST00000543428 UTRNP46939 3433 aa28.74■■■□□ 2.19
PSME3-204ENST00000543428 GRIN3BO60391 1043 aa28.73■■■□□ 2.19
PSME3-204ENST00000543428 PRKAR2BP31323 418 aa28.73■■■□□ 2.19
PSME3-204ENST00000543428 ADAMTS7Q9UKP4 1686 aa28.73■■■□□ 2.19
PSME3-204ENST00000543428 U2AF1L5P0DN76 240 aaPredicted RBP28.72■■■□□ 2.19
PSME3-204ENST00000543428 U2AF1Q01081 240 aaKnown RBP eCLIP28.72■■■□□ 2.19
PSME3-204ENST00000543428 TEFQ10587 303 aa28.72■■■□□ 2.19
PSME3-204ENST00000543428 DNAJC10Q8IXB1 793 aa28.72■■■□□ 2.19
PSME3-204ENST00000543428 CICQ96RK0 1608 aaPredicted RBP28.71■■■□□ 2.19
PSME3-204ENST00000543428 YBX3P16989 372 aaKnown RBP eCLIP28.7■■■□□ 2.181e-6■■□□□ 14.1
PSME3-204ENST00000543428 TTC5Q8N0Z6 440 aa28.7■■■□□ 2.18
PSME3-204ENST00000543428 RSPH6AQ9H0K4 717 aa28.7■■■□□ 2.18
PSME3-204ENST00000543428 GYS1P13807 737 aa28.69■■■□□ 2.18
PSME3-204ENST00000543428 CCDC87Q9NVE4 849 aa28.69■■■□□ 2.18
PSME3-204ENST00000543428 PHACTR3Q96KR7 559 aa28.68■■■□□ 2.18
PSME3-204ENST00000543428 C4AP0C0L4 1744 aa28.67■■■□□ 2.18
PSME3-204ENST00000543428 INTS5Q6P9B9 1019 aaKnown RBP28.67■■■□□ 2.18
PSME3-204ENST00000543428 ZNF784Q8NCA9 323 aaPredicted RBP28.67■■■□□ 2.18
PSME3-204ENST00000543428 IL17REQ8NFR9 667 aa28.67■■■□□ 2.18
PSME3-204ENST00000543428 GOLGB1Q14789 3259 aaKnown RBP28.67■■■□□ 2.18
PSME3-204ENST00000543428 KCPQ6ZWJ8 1503 aa28.67■■■□□ 2.18
PSME3-204ENST00000543428 CYP19A1P11511 503 aaPredicted RBP28.65■■■□□ 2.18
PSME3-204ENST00000543428 PARP3Q9Y6F1 533 aa28.65■■■□□ 2.18
PSME3-204ENST00000543428 FCHSD2O94868 740 aa28.64■■■□□ 2.18
PSME3-204ENST00000543428 VSIG10Q8N0Z9 540 aa28.64■■■□□ 2.18
PSME3-204ENST00000543428 SRP68Q9UHB9 627 aaKnown RBP28.64■■■□□ 2.18
PSME3-204ENST00000543428 WWC3Q9ULE0 1092 aa28.64■■■□□ 2.18
PSME3-204ENST00000543428 USP42Q9H9J4 1324 aaKnown RBP28.63■■■□□ 2.17
PSME3-204ENST00000543428 ZPR1O75312 459 aa28.62■■■□□ 2.17
PSME3-204ENST00000543428 UBR2Q8IWV8 1755 aa28.61■■■□□ 2.17
PSME3-204ENST00000543428 STARD3NLO95772 234 aa28.6■■■□□ 2.17
PSME3-204ENST00000543428 ZNF790Q6PG37 636 aa28.6■■■□□ 2.17
PSME3-204ENST00000543428 RTF1Q92541 710 aaKnown RBP28.6■■■□□ 2.17
PSME3-204ENST00000543428 SOS1Q07889 1333 aaPredicted RBP28.6■■■□□ 2.17
PSME3-204ENST00000543428 FKBP8Q14318 412 aa28.59■■■□□ 2.17
PSME3-204ENST00000543428 SIPA1L3O60292 1781 aaPredicted RBP28.58■■■□□ 2.17
PSME3-204ENST00000543428 NEFMP07197 916 aa28.58■■■□□ 2.17
PSME3-204ENST00000543428 ZNF496Q96IT1 587 aaPredicted RBP28.58■■■□□ 2.17
PSME3-204ENST00000543428 ZBTB1Q9Y2K1 713 aa28.58■■■□□ 2.17
PSME3-204ENST00000543428 CEMIPQ8WUJ3 1361 aa28.58■■■□□ 2.17
PSME3-204ENST00000543428 TGFB2P61812 414 aa28.57■■■□□ 2.16
PSME3-204ENST00000543428 KIF13BQ9NQT8 1826 aa28.57■■■□□ 2.16
PSME3-204ENST00000543428 BTBD11A6QL63 1104 aa28.56■■■□□ 2.16
PSME3-204ENST00000543428 CANXP27824 592 aaKnown RBP28.56■■■□□ 2.16
PSME3-204ENST00000543428 COL15A1P39059 1388 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms