RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 RBSNQ9H1K0 784 aa16.31■□□□□ 0.2
RPS6KC1-206ENST00000543354 URI1O94763 535 aaPredicted RBP16.31■□□□□ 0.2
RPS6KC1-206ENST00000543354 RUFY1Q96T51 708 aa16.31■□□□□ 0.2
RPS6KC1-206ENST00000543354 ERC1Q8IUD2 1116 aa16.3■□□□□ 0.2
RPS6KC1-206ENST00000543354 OTUD7AQ8TE49 926 aaPredicted RBP16.3■□□□□ 0.2
RPS6KC1-206ENST00000543354 ZBTB40Q9NUA8 1239 aa16.3■□□□□ 0.2
RPS6KC1-206ENST00000543354 GLRX3O76003 335 aaKnown RBP16.3■□□□□ 0.2
RPS6KC1-206ENST00000543354 FAM69CQ0P6D2 419 aa16.3■□□□□ 0.2
RPS6KC1-206ENST00000543354 DHX37Q8IY37 1157 aaKnown RBP16.3■□□□□ 0.2
RPS6KC1-206ENST00000543354 SNX21Q969T3 373 aa16.3■□□□□ 0.2
RPS6KC1-206ENST00000543354 ATAD2Q6PL18 1390 aa16.3■□□□□ 0.2
RPS6KC1-206ENST00000543354 THOC2Q8NI27 1593 aaKnown RBP16.3■□□□□ 0.2
RPS6KC1-206ENST00000543354 H0YHG0 523 aa16.3■□□□□ 0.2
RPS6KC1-206ENST00000543354 OFD1O75665 1012 aa16.3■□□□□ 0.2
RPS6KC1-206ENST00000543354 C17orf53Q8N3J3 647 aaPredicted RBP16.3■□□□□ 0.2
RPS6KC1-206ENST00000543354 SFPQP23246 707 aaKnown RBP eCLIP16.3■□□□□ 0.2
RPS6KC1-206ENST00000543354 CCDC141Q6ZP82 1450 aa16.29■□□□□ 0.2
RPS6KC1-206ENST00000543354 CCT2P78371 535 aaKnown RBP16.29■□□□□ 0.2
RPS6KC1-206ENST00000543354 CCDC186Q7Z3E2 898 aa16.29■□□□□ 0.2
RPS6KC1-206ENST00000543354 ABCC11Q96J66 1382 aa16.29■□□□□ 0.2
RPS6KC1-206ENST00000543354 TSC1Q92574 1164 aa16.29■□□□□ 0.2
RPS6KC1-206ENST00000543354 CHAMP1Q96JM3 812 aa16.29■□□□□ 0.2
RPS6KC1-206ENST00000543354 FLIIQ13045 1269 aa16.29■□□□□ 0.2
RPS6KC1-206ENST00000543354 VPS37DQ86XT2 251 aa16.29■□□□□ 0.2
RPS6KC1-206ENST00000543354 KIF18AQ8NI77 898 aa16.29■□□□□ 0.2
RPS6KC1-206ENST00000543354 IDI1Q13907 227 aa16.28■□□□□ 0.2
RPS6KC1-206ENST00000543354 SCAND2PQ9GZW5 306 aaPredicted RBP16.28■□□□□ 0.2
RPS6KC1-206ENST00000543354 PDE1AP54750 535 aa16.28■□□□□ 0.2
RPS6KC1-206ENST00000543354 CCDC82Q8N4S0 544 aa16.28■□□□□ 0.2
RPS6KC1-206ENST00000543354 MAGI1Q96QZ7 1491 aaPredicted RBP16.28■□□□□ 0.2
RPS6KC1-206ENST00000543354 ZNF692Q9BU19 519 aaPredicted RBP16.28■□□□□ 0.2
RPS6KC1-206ENST00000543354 SLC52A1Q9NWF4 448 aa16.28■□□□□ 0.2
RPS6KC1-206ENST00000543354 LEKR1Q6ZMV7 388 aa16.27■□□□□ 0.2
RPS6KC1-206ENST00000543354 EVA1CP58658 441 aa16.27■□□□□ 0.2
RPS6KC1-206ENST00000543354 ZFP91Q96JP5 570 aaPredicted RBP16.27■□□□□ 0.2
RPS6KC1-206ENST00000543354 SCAF11Q99590 1463 aaKnown RBP16.27■□□□□ 0.19
RPS6KC1-206ENST00000543354 MCM5P33992 734 aa16.27■□□□□ 0.19
RPS6KC1-206ENST00000543354 DNM1Q05193 864 aaKnown RBP16.27■□□□□ 0.19
RPS6KC1-206ENST00000543354 CEP89Q96ST8 783 aa16.27■□□□□ 0.19
RPS6KC1-206ENST00000543354 ACBD3Q9H3P7 528 aa16.27■□□□□ 0.19
RPS6KC1-206ENST00000543354 UGGT2Q9NYU1 1516 aa16.27■□□□□ 0.19
RPS6KC1-206ENST00000543354 RALGAPBQ86X10 1494 aa16.27■□□□□ 0.19
RPS6KC1-206ENST00000543354 FAM193AP78312 1265 aa16.26■□□□□ 0.19
RPS6KC1-206ENST00000543354 RAB11FIP4Q86YS3 637 aa16.26■□□□□ 0.19
RPS6KC1-206ENST00000543354 PHACTR3Q96KR7 559 aa16.26■□□□□ 0.19
RPS6KC1-206ENST00000543354 CWC15Q9P013 229 aaKnown RBP16.26■□□□□ 0.19
RPS6KC1-206ENST00000543354 UBE2HP62256 183 aa16.26■□□□□ 0.19
RPS6KC1-206ENST00000543354 ESCO1Q5FWF5 840 aa16.26■□□□□ 0.19
RPS6KC1-206ENST00000543354 PPP1R42Q7Z4L9 355 aa16.26■□□□□ 0.19
RPS6KC1-206ENST00000543354 PLEKHO1Q53GL0 409 aaPredicted RBP16.26■□□□□ 0.19
RPS6KC1-206ENST00000543354 NOM1Q5C9Z4 860 aaKnown RBP16.26■□□□□ 0.19
RPS6KC1-206ENST00000543354 GAS2L3Q86XJ1 694 aa16.26■□□□□ 0.19
RPS6KC1-206ENST00000543354 LRRC2Q9BYS8 371 aa16.26■□□□□ 0.19
RPS6KC1-206ENST00000543354 ZSWIM4Q9H7M6 989 aa16.26■□□□□ 0.19
RPS6KC1-206ENST00000543354 CPA1P15085 419 aa16.25■□□□□ 0.19
RPS6KC1-206ENST00000543354 KIAA0586Q9BVV6 1533 aa16.25■□□□□ 0.19
RPS6KC1-206ENST00000543354 BTBD11A6QL63 1104 aa16.25■□□□□ 0.19
RPS6KC1-206ENST00000543354 GTF2F1P35269 517 aaKnown RBP eCLIP16.25■□□□□ 0.195e-6■■■■□ 24.4
RPS6KC1-206ENST00000543354 TMCO3Q6UWJ1 677 aa16.25■□□□□ 0.19
RPS6KC1-206ENST00000543354 JARID2Q92833 1246 aaPredicted RBP16.25■□□□□ 0.19
RPS6KC1-206ENST00000543354 CCDC102AQ96A19 550 aa16.25■□□□□ 0.19
RPS6KC1-206ENST00000543354 HSP90AA4PQ58FG1 418 aa16.24■□□□□ 0.19
RPS6KC1-206ENST00000543354 PLEKHM2Q8IWE5 1019 aa16.24■□□□□ 0.19
RPS6KC1-206ENST00000543354 ZRANB1Q9UGI0 708 aa16.24■□□□□ 0.19
RPS6KC1-206ENST00000543354 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.24■□□□□ 0.19
RPS6KC1-206ENST00000543354 FBXO31Q5XUX0 539 aaPredicted RBP16.24■□□□□ 0.19
RPS6KC1-206ENST00000543354 KLHL10Q6JEL2 608 aa16.24■□□□□ 0.19
RPS6KC1-206ENST00000543354 PPFIBP1Q86W92 1011 aa16.24■□□□□ 0.19
RPS6KC1-206ENST00000543354 NUP133Q8WUM0 1156 aa16.24■□□□□ 0.19
RPS6KC1-206ENST00000543354 PIBF1Q8WXW3 757 aa16.24■□□□□ 0.19
RPS6KC1-206ENST00000543354 PRAG1Q86YV5 1406 aa16.24■□□□□ 0.19
RPS6KC1-206ENST00000543354 GNAT3A8MTJ3 354 aa16.24■□□□□ 0.19
RPS6KC1-206ENST00000543354 FILIP1LQ4L180 1135 aa16.24■□□□□ 0.19
RPS6KC1-206ENST00000543354 JMYQ8N9B5 988 aa16.24■□□□□ 0.19
RPS6KC1-206ENST00000543354 IQGAP2Q13576 1575 aa16.24■□□□□ 0.19
RPS6KC1-206ENST00000543354 VAMP4O75379 141 aa16.24■□□□□ 0.19
RPS6KC1-206ENST00000543354 DACT1Q9NYF0 836 aa16.24■□□□□ 0.19
RPS6KC1-206ENST00000543354 ANKRD44Q8N8A2 993 aa16.23■□□□□ 0.19
RPS6KC1-206ENST00000543354 AK7Q96M32 723 aa16.23■□□□□ 0.19
RPS6KC1-206ENST00000543354 ZSCAN22P10073 491 aaPredicted RBP16.23■□□□□ 0.19
RPS6KC1-206ENST00000543354 TSPYL1Q9H0U9 437 aa16.23■□□□□ 0.19
RPS6KC1-206ENST00000543354 GPATCH8Q9UKJ3 1502 aaKnown RBP16.23■□□□□ 0.19
RPS6KC1-206ENST00000543354 NOS1P29475 1434 aa16.23■□□□□ 0.19
RPS6KC1-206ENST00000543354 MRC2Q9UBG0 1479 aa16.23■□□□□ 0.19
RPS6KC1-206ENST00000543354 CPLX3Q8WVH0 158 aa16.23■□□□□ 0.19
RPS6KC1-206ENST00000543354 CCDC47Q96A33 483 aaKnown RBP16.23■□□□□ 0.19
RPS6KC1-206ENST00000543354 RBM33Q96EV2 1170 aaKnown RBP16.23■□□□□ 0.19
RPS6KC1-206ENST00000543354 ESYT1Q9BSJ8 1104 aa16.23■□□□□ 0.19
RPS6KC1-206ENST00000543354 PI4KAP2A4QPH2 592 aa16.22■□□□□ 0.19
RPS6KC1-206ENST00000543354 PI4KAP1Q8N8J0 262 aa16.22■□□□□ 0.19
RPS6KC1-206ENST00000543354 FSIP1Q8NA03 581 aa16.22■□□□□ 0.19
RPS6KC1-206ENST00000543354 HSP90AB2PQ58FF8 381 aa16.22■□□□□ 0.19
RPS6KC1-206ENST00000543354 MRPL50Q8N5N7 158 aaKnown RBP16.22■□□□□ 0.19
RPS6KC1-206ENST00000543354 PRIMPOLQ96LW4 560 aa16.22■□□□□ 0.19
RPS6KC1-206ENST00000543354 TRIM34Q9BYJ4 488 aa16.22■□□□□ 0.19
RPS6KC1-206ENST00000543354 CUL7Q14999 1698 aa16.22■□□□□ 0.19
RPS6KC1-206ENST00000543354 MAGI3Q5TCQ9 1506 aa16.22■□□□□ 0.19
RPS6KC1-206ENST00000543354 POLR3DP05423 398 aaPredicted RBP16.22■□□□□ 0.19
RPS6KC1-206ENST00000543354 SH2B1Q9NRF2 756 aaPredicted RBP16.22■□□□□ 0.19
RPS6KC1-206ENST00000543354 FAM173BQ6P4H8 233 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms