RNA–Protein interactions for RNA: ENST00000543254.1

KLHL42-204, Transcript of kelch like family member 42, humanhuman

TSL 2

Gene KLHL42, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-204ENST00000543254 LMOD3Q0VAK6 560 aa16.57■□□□□ 0.24
KLHL42-204ENST00000543254 CCDC184Q52MB2 194 aa16.57■□□□□ 0.24
KLHL42-204ENST00000543254 DIEXFQ68CQ4 756 aaKnown RBP16.57■□□□□ 0.24
KLHL42-204ENST00000543254 MCM10Q7L590 875 aa16.57■□□□□ 0.24
KLHL42-204ENST00000543254 TTC5Q8N0Z6 440 aa16.57■□□□□ 0.24
KLHL42-204ENST00000543254 IL17REQ8NFR9 667 aa16.57■□□□□ 0.24
KLHL42-204ENST00000543254 LRRC4BQ9NT99 713 aa16.57■□□□□ 0.24
KLHL42-204ENST00000543254 PTCD1O75127 700 aaKnown RBP16.56■□□□□ 0.24
KLHL42-204ENST00000543254 ATP6V1AP38606 617 aa16.56■□□□□ 0.24
KLHL42-204ENST00000543254 RIPK4P57078 832 aa16.56■□□□□ 0.24
KLHL42-204ENST00000543254 NEUROD2Q15784 382 aa16.56■□□□□ 0.24
KLHL42-204ENST00000543254 TOGARAM1Q9Y4F4 1720 aa16.56■□□□□ 0.24
KLHL42-204ENST00000543254 DCTN1Q14203 1278 aa16.55■□□□□ 0.24
KLHL42-204ENST00000543254 ANO8Q9HCE9 1232 aaPredicted RBP16.55■□□□□ 0.24
KLHL42-204ENST00000543254 RGPD3A6NKT7 1758 aaPredicted RBP16.55■□□□□ 0.24
KLHL42-204ENST00000543254 RGPD4Q7Z3J3 1758 aa16.55■□□□□ 0.24
KLHL42-204ENST00000543254 TMPOP42166 694 aaKnown RBP16.54■□□□□ 0.24
KLHL42-204ENST00000543254 SLC15A2Q16348 729 aa16.54■□□□□ 0.24
KLHL42-204ENST00000543254 TFCP2L1Q9NZI6 479 aa16.54■□□□□ 0.24
KLHL42-204ENST00000543254 RRP7AQ9Y3A4 280 aaKnown RBP16.54■□□□□ 0.24
KLHL42-204ENST00000543254 BTBD11A6QL63 1104 aa16.53■□□□□ 0.24
KLHL42-204ENST00000543254 SLC39A6Q13433 755 aa16.53■□□□□ 0.24
KLHL42-204ENST00000543254 PNISRQ8TF01 805 aaKnown RBP16.53■□□□□ 0.24
KLHL42-204ENST00000543254 AK7Q96M32 723 aa16.53■□□□□ 0.24
KLHL42-204ENST00000543254 CEMIPQ8WUJ3 1361 aa16.52■□□□□ 0.24
KLHL42-204ENST00000543254 MRC1P22897 1456 aa16.52■□□□□ 0.23
KLHL42-204ENST00000543254 RREB1Q92766 1687 aa16.51■□□□□ 0.23
KLHL42-204ENST00000543254 FAM9BQ8IZU0 186 aa16.51■□□□□ 0.23
KLHL42-204ENST00000543254 ITGB4P16144 1822 aa16.5■□□□□ 0.23
KLHL42-204ENST00000543254 APAF1O14727 1248 aa16.5■□□□□ 0.23
KLHL42-204ENST00000543254 TAF7Q15545 349 aaPredicted RBP16.5■□□□□ 0.23
KLHL42-204ENST00000543254 ZNF827Q17R98 1081 aa16.5■□□□□ 0.23
KLHL42-204ENST00000543254 ZNF790Q6PG37 636 aa16.5■□□□□ 0.23
KLHL42-204ENST00000543254 NUP188Q5SRE5 1749 aa16.5■□□□□ 0.23
KLHL42-204ENST00000543254 MSH5O43196 834 aa16.49■□□□□ 0.23
KLHL42-204ENST00000543254 AKT1S1Q96B36 256 aa16.49■□□□□ 0.23
KLHL42-204ENST00000543254 THUMPD2Q9BTF0 503 aaKnown RBP16.49■□□□□ 0.23
KLHL42-204ENST00000543254 ITPK1Q13572 414 aa16.48■□□□□ 0.23
KLHL42-204ENST00000543254 LINC00116Q8NCU8 138 aa16.48■□□□□ 0.23
KLHL42-204ENST00000543254 FMNL2Q96PY5 1086 aa16.48■□□□□ 0.23
KLHL42-204ENST00000543254 SCN11AQ9UI33 1791 aa16.48■□□□□ 0.23
KLHL42-204ENST00000543254 CCER2I3L3R5 266 aa16.46■□□□□ 0.23
KLHL42-204ENST00000543254 GNPATO15228 680 aa16.46■□□□□ 0.23
KLHL42-204ENST00000543254 PHF14O94880 888 aa16.46■□□□□ 0.23
KLHL42-204ENST00000543254 CALD1Q05682 793 aaKnown RBP16.46■□□□□ 0.23
KLHL42-204ENST00000543254 VSIG10Q8N0Z9 540 aa16.46■□□□□ 0.23
KLHL42-204ENST00000543254 FLAD1Q8NFF5 587 aa16.46■□□□□ 0.23
KLHL42-204ENST00000543254 SLC4A9Q96Q91 983 aa16.46■□□□□ 0.23
KLHL42-204ENST00000543254 STARD3NLO95772 234 aa16.45■□□□□ 0.22
KLHL42-204ENST00000543254 DNAJC10Q8IXB1 793 aa16.45■□□□□ 0.22
KLHL42-204ENST00000543254 ZNF496Q96IT1 587 aaPredicted RBP16.45■□□□□ 0.22
KLHL42-204ENST00000543254 TEX13AQ9BXU3 409 aaPredicted RBP16.45■□□□□ 0.22
KLHL42-204ENST00000543254 MIS18AQ9NYP9 233 aa16.45■□□□□ 0.22
KLHL42-204ENST00000543254 TSPYL4Q9UJ04 414 aa16.45■□□□□ 0.22
KLHL42-204ENST00000543254 LAS1LQ9Y4W2 734 aaKnown RBP16.45■□□□□ 0.22
KLHL42-204ENST00000543254 ADAMTS7Q9UKP4 1686 aa16.45■□□□□ 0.22
KLHL42-204ENST00000543254 LY75O60449 1722 aa16.45■□□□□ 0.22
KLHL42-204ENST00000543254 RTCBQ9Y3I0 505 aaKnown RBP16.44■□□□□ 0.22
KLHL42-204ENST00000543254 HEG1Q9ULI3 1381 aa16.43■□□□□ 0.22
KLHL42-204ENST00000543254 KCNQ3O43525 872 aa16.43■□□□□ 0.22
KLHL42-204ENST00000543254 ZBTB7AO95365 584 aa16.43■□□□□ 0.22
KLHL42-204ENST00000543254 CRKLP46109 303 aaKnown RBP16.43■□□□□ 0.22
KLHL42-204ENST00000543254 RC3H1Q5TC82 1133 aaKnown RBP16.43■□□□□ 0.22
KLHL42-204ENST00000543254 TRIM35Q9UPQ4 493 aa16.43■□□□□ 0.22
KLHL42-204ENST00000543254 PNPLA7Q6ZV29 1317 aa16.43■□□□□ 0.22
KLHL42-204ENST00000543254 CNTNAP4Q9C0A0 1308 aa16.43■□□□□ 0.22
KLHL42-204ENST00000543254 PAPPAQ13219 1627 aa16.42■□□□□ 0.22
KLHL42-204ENST00000543254 SENP3-EIF4A1A0A087X0R7 540 aa16.42■□□□□ 0.22
KLHL42-204ENST00000543254 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.42■□□□□ 0.22
KLHL42-204ENST00000543254 SNRPA1P09661 255 aaKnown RBP16.42■□□□□ 0.22
KLHL42-204ENST00000543254 SSFA2P28290 1259 aa16.42■□□□□ 0.22
KLHL42-204ENST00000543254 NPM2Q86SE8 214 aaKnown RBP16.42■□□□□ 0.22
KLHL42-204ENST00000543254 SPON1Q9HCB6 807 aa16.42■□□□□ 0.22
KLHL42-204ENST00000543254 MIER1Q8N108 512 aa16.41■□□□□ 0.22
KLHL42-204ENST00000543254 PDGFDQ9GZP0 370 aaPredicted RBP16.41■□□□□ 0.22
KLHL42-204ENST00000543254 CCDC87Q9NVE4 849 aa16.41■□□□□ 0.22
KLHL42-204ENST00000543254 BABAM1Q9NWV8 329 aa16.41■□□□□ 0.22
KLHL42-204ENST00000543254 SALL2Q9Y467 1007 aaPredicted RBP16.41■□□□□ 0.22
KLHL42-204ENST00000543254 KCPQ6ZWJ8 1503 aa16.4■□□□□ 0.22
KLHL42-204ENST00000543254 CYP19A1P11511 503 aaPredicted RBP16.4■□□□□ 0.22
KLHL42-204ENST00000543254 TRAPPC3LQ5T215 181 aa16.4■□□□□ 0.22
KLHL42-204ENST00000543254 COL23A1Q86Y22 540 aaPredicted RBP16.4■□□□□ 0.22
KLHL42-204ENST00000543254 SLC16A10Q8TF71 515 aa16.4■□□□□ 0.22
KLHL42-204ENST00000543254 MTFR1LQ9H019 292 aa16.4■□□□□ 0.22
KLHL42-204ENST00000543254 ATF5Q9Y2D1 282 aaPredicted RBP16.4■□□□□ 0.22
KLHL42-204ENST00000543254 RPS6KA4O75676 772 aa16.39■□□□□ 0.21
KLHL42-204ENST00000543254 ADRA2BP18089 450 aa16.39■□□□□ 0.21
KLHL42-204ENST00000543254 PPP1R1BQ9UD71 204 aaPredicted RBP16.39■□□□□ 0.21
KLHL42-204ENST00000543254 C5P01031 1676 aa16.39■□□□□ 0.21
KLHL42-204ENST00000543254 C4BP0C0L5 1744 aa16.39■□□□□ 0.21
KLHL42-204ENST00000543254 CANXP27824 592 aaKnown RBP16.38■□□□□ 0.21
KLHL42-204ENST00000543254 RFC4P35249 363 aa16.38■□□□□ 0.21
KLHL42-204ENST00000543254 ZNF330Q9Y3S2 320 aaPredicted RBP16.38■□□□□ 0.21
KLHL42-204ENST00000543254 POLD1P28340 1107 aa16.37■□□□□ 0.21
KLHL42-204ENST00000543254 EIF4A1P60842 406 aaKnown RBP16.37■□□□□ 0.21
KLHL42-204ENST00000543254 GNAI1P63096 354 aa16.37■□□□□ 0.21
KLHL42-204ENST00000543254 CCDC27Q2M243 656 aa16.37■□□□□ 0.21
KLHL42-204ENST00000543254 INTS5Q6P9B9 1019 aaKnown RBP16.37■□□□□ 0.21
KLHL42-204ENST00000543254 SMIM5Q71RC9 77 aa16.37■□□□□ 0.21
KLHL42-204ENST00000543254 CFAP44Q96MT7 982 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms