RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.68□□□□□ -0.22
CDH4-201ENST00000543233 LRRC7Q96NW7 1537 aa13.68□□□□□ -0.22
CDH4-201ENST00000543233 TMEM2Q9UHN6 1383 aa13.68□□□□□ -0.22
CDH4-201ENST00000543233 PRIM1P49642 420 aaKnown RBP13.68□□□□□ -0.22
CDH4-201ENST00000543233 EIF4A2Q14240 407 aaKnown RBP13.68□□□□□ -0.22
CDH4-201ENST00000543233 HOMEZQ8IX15 550 aa13.68□□□□□ -0.22
CDH4-201ENST00000543233 OGFRQ9NZT2 677 aa13.68□□□□□ -0.22
CDH4-201ENST00000543233 CPS1P31327 1500 aa13.68□□□□□ -0.22
CDH4-201ENST00000543233 GNAI1P63096 354 aa13.67□□□□□ -0.22
CDH4-201ENST00000543233 TMED8Q6PL24 325 aaPredicted RBP13.67□□□□□ -0.22
CDH4-201ENST00000543233 TTC21BQ7Z4L5 1316 aa13.67□□□□□ -0.22
CDH4-201ENST00000543233 FOXO3O43524 673 aa13.67□□□□□ -0.22
CDH4-201ENST00000543233 CT47B1P0C2W7 299 aaPredicted RBP13.67□□□□□ -0.22
CDH4-201ENST00000543233 SSFA2P28290 1259 aa13.67□□□□□ -0.22
CDH4-201ENST00000543233 ANKRD45Q5TZF3 282 aa13.67□□□□□ -0.22
CDH4-201ENST00000543233 TSPYL1Q9H0U9 437 aa13.67□□□□□ -0.22
CDH4-201ENST00000543233 EDC4Q6P2E9 1401 aaKnown RBP13.67□□□□□ -0.22
CDH4-201ENST00000543233 ZSCAN23Q3MJ62 389 aa13.66□□□□□ -0.22
CDH4-201ENST00000543233 MCTP1Q6DN14 999 aa13.66□□□□□ -0.22
CDH4-201ENST00000543233 ZNF622Q969S3 477 aaKnown RBP eCLIP13.66□□□□□ -0.22
CDH4-201ENST00000543233 PDLIM2Q96JY6 352 aa13.66□□□□□ -0.22
CDH4-201ENST00000543233 IL16Q14005 1332 aa13.66□□□□□ -0.22
CDH4-201ENST00000543233 GTF2A1P52655 376 aaPredicted RBP13.66□□□□□ -0.22
CDH4-201ENST00000543233 KLHL40Q2TBA0 621 aa13.66□□□□□ -0.22
CDH4-201ENST00000543233 ZBTB40Q9NUA8 1239 aa13.66□□□□□ -0.22
CDH4-201ENST00000543233 MMP14P50281 582 aa13.66□□□□□ -0.22
CDH4-201ENST00000543233 GPATCH11Q8N954 259 aa13.66□□□□□ -0.22
CDH4-201ENST00000543233 ZNF692Q9BU19 519 aaPredicted RBP13.66□□□□□ -0.22
CDH4-201ENST00000543233 SLFN14P0C7P3 912 aa13.65□□□□□ -0.22
CDH4-201ENST00000543233 LMOD3Q0VAK6 560 aa13.65□□□□□ -0.22
CDH4-201ENST00000543233 AXDND1Q5T1B0 1012 aaPredicted RBP13.65□□□□□ -0.22
CDH4-201ENST00000543233 BANK1Q8NDB2 785 aa13.65□□□□□ -0.22
CDH4-201ENST00000543233 FEZ1Q99689 392 aa13.65□□□□□ -0.22
CDH4-201ENST00000543233 SPATA31D1Q6ZQQ2 1576 aa13.65□□□□□ -0.22
CDH4-201ENST00000543233 NECTIN2Q92692 538 aa13.65□□□□□ -0.22
CDH4-201ENST00000543233 RSPH14Q9UHP6 348 aa13.65□□□□□ -0.22
CDH4-201ENST00000543233 FAM135BQ49AJ0 1406 aa13.65□□□□□ -0.22
CDH4-201ENST00000543233 AGLP35573 1532 aa13.64□□□□□ -0.23
CDH4-201ENST00000543233 RBM25P49756 843 aaKnown RBP13.64□□□□□ -0.23
CDH4-201ENST00000543233 TOMM22Q9NS69 142 aa13.64□□□□□ -0.23
CDH4-201ENST00000543233 GEMIN8Q9NWZ8 242 aaKnown RBP13.64□□□□□ -0.23
CDH4-201ENST00000543233 AMPHP49418 695 aa13.64□□□□□ -0.23
CDH4-201ENST00000543233 NOLC1Q14978 699 aaKnown RBP eCLIP13.64□□□□□ -0.23
CDH4-201ENST00000543233 RAB3GAP1Q15042 981 aa13.64□□□□□ -0.23
CDH4-201ENST00000543233 MRPL50Q8N5N7 158 aaKnown RBP13.64□□□□□ -0.23
CDH4-201ENST00000543233 CPSF1Q10570 1443 aaKnown RBP13.64□□□□□ -0.23
CDH4-201ENST00000543233 ATP7BP35670 1465 aa13.64□□□□□ -0.23
CDH4-201ENST00000543233 ADGRB2O60241 1585 aa13.64□□□□□ -0.23
CDH4-201ENST00000543233 RBM27Q9P2N5 1060 aaKnown RBP13.64□□□□□ -0.23
CDH4-201ENST00000543233 MAP2P11137 1827 aaKnown RBP13.63□□□□□ -0.23
CDH4-201ENST00000543233 VIRMAQ69YN4 1812 aaKnown RBP13.63□□□□□ -0.23
CDH4-201ENST00000543233 IFT57Q9NWB7 429 aa13.63□□□□□ -0.23
CDH4-201ENST00000543233 NLRP6P59044 892 aa13.62□□□□□ -0.23
CDH4-201ENST00000543233 CFAP44Q96MT7 982 aa13.62□□□□□ -0.23
CDH4-201ENST00000543233 FEZ2Q9UHY8 353 aaPredicted RBP13.62□□□□□ -0.23
CDH4-201ENST00000543233 MED14O60244 1454 aa13.62□□□□□ -0.23
CDH4-201ENST00000543233 ALDH1L2Q3SY69 923 aa13.62□□□□□ -0.23
CDH4-201ENST00000543233 RIOK3O14730 519 aaKnown RBP13.62□□□□□ -0.23
CDH4-201ENST00000543233 TNNT1P13805 278 aa13.62□□□□□ -0.23
CDH4-201ENST00000543233 GTF2F1P35269 517 aaKnown RBP eCLIP13.62□□□□□ -0.23
CDH4-201ENST00000543233 SLC4A10Q6U841 1118 aa13.61□□□□□ -0.23
CDH4-201ENST00000543233 ZNF445P59923 1031 aa13.61□□□□□ -0.23
CDH4-201ENST00000543233 HDAC1Q13547 482 aaPredicted RBP13.61□□□□□ -0.23
CDH4-201ENST00000543233 TERF2Q15554 542 aa13.61□□□□□ -0.23
CDH4-201ENST00000543233 YY1AP1Q9H869 796 aa13.61□□□□□ -0.23
CDH4-201ENST00000543233 SYCE3A1L190 88 aa13.6□□□□□ -0.23
CDH4-201ENST00000543233 HSP90B1P14625 803 aaKnown RBP13.6□□□□□ -0.23
CDH4-201ENST00000543233 TTC12Q9H892 705 aaPredicted RBP13.6□□□□□ -0.23
CDH4-201ENST00000543233 DIAPH3Q9NSV4 1193 aa13.6□□□□□ -0.23
CDH4-201ENST00000543233 CIZ1Q9ULV3 898 aaPredicted RBP13.6□□□□□ -0.23
CDH4-201ENST00000543233 MAP3K19Q56UN5 1328 aa13.6□□□□□ -0.23
CDH4-201ENST00000543233 ZBTB7BO15156 539 aaPredicted RBP13.6□□□□□ -0.23
CDH4-201ENST00000543233 TULP2O00295 520 aa13.59□□□□□ -0.23
CDH4-201ENST00000543233 PLCB2Q00722 1185 aa13.59□□□□□ -0.23
CDH4-201ENST00000543233 ADAMTS13Q76LX8 1427 aa13.59□□□□□ -0.23
CDH4-201ENST00000543233 BAG4O95429 457 aaKnown RBP13.59□□□□□ -0.23
CDH4-201ENST00000543233 KCNA6P17658 529 aa13.59□□□□□ -0.23
CDH4-201ENST00000543233 CHD1LQ86WJ1 897 aa13.59□□□□□ -0.23
CDH4-201ENST00000543233 SMC5Q8IY18 1101 aa13.59□□□□□ -0.23
CDH4-201ENST00000543233 USHBP1Q8N6Y0 703 aa13.59□□□□□ -0.23
CDH4-201ENST00000543233 CNKSR2Q8WXI2 1034 aa13.59□□□□□ -0.23
CDH4-201ENST00000543233 EFCC1Q9HA90 598 aa13.59□□□□□ -0.23
CDH4-201ENST00000543233 DLC1Q96QB1 1528 aa13.58□□□□□ -0.23
CDH4-201ENST00000543233 LMOD2Q6P5Q4 547 aa13.58□□□□□ -0.24
CDH4-201ENST00000543233 RTF1Q92541 710 aaKnown RBP13.58□□□□□ -0.24
CDH4-201ENST00000543233 NRXN3Q9Y4C0 1643 aa13.58□□□□□ -0.24
CDH4-201ENST00000543233 PIBF1Q8WXW3 757 aa13.58□□□□□ -0.24
CDH4-201ENST00000543233 KIF20BQ96Q89 1820 aa13.58□□□□□ -0.24
CDH4-201ENST00000543233 F6X3S4 739 aa13.57□□□□□ -0.24
CDH4-201ENST00000543233 ZNF853P0CG23 659 aa13.57□□□□□ -0.24
CDH4-201ENST00000543233 MTHFSDQ2M296 383 aaKnown RBP13.57□□□□□ -0.24
CDH4-201ENST00000543233 MYCBPQ99417 103 aaPredicted RBP13.57□□□□□ -0.24
CDH4-201ENST00000543233 PTPRUQ92729 1446 aa13.57□□□□□ -0.24
CDH4-201ENST00000543233 IBTKQ9P2D0 1353 aaPredicted RBP13.57□□□□□ -0.24
CDH4-201ENST00000543233 SLC4A2P04920 1241 aa13.57□□□□□ -0.24
CDH4-201ENST00000543233 SIRT2Q8IXJ6 389 aa13.57□□□□□ -0.24
CDH4-201ENST00000543233 ABTB2Q8N961 1025 aa13.57□□□□□ -0.24
CDH4-201ENST00000543233 TSPYL4Q9UJ04 414 aa13.57□□□□□ -0.24
CDH4-201ENST00000543233 RAD51AP2Q09MP3 1159 aa13.56□□□□□ -0.24
CDH4-201ENST00000543233 AATKQ6ZMQ8 1374 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms