RNA–Protein interactions for RNA: ENST00000542428.1

AC009509.3-201, humanhuman

BASIC

Gene AC009509.3, Length 314 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009509.3-201ENST00000542428 MCM10Q7L590 875 aa13.78□□□□□ -0.2
AC009509.3-201ENST00000542428 BCORQ6W2J9 1755 aa13.78□□□□□ -0.2
AC009509.3-201ENST00000542428 KCNQ2O43526 872 aa13.77□□□□□ -0.21
AC009509.3-201ENST00000542428 TRIM37O94972 964 aa13.77□□□□□ -0.21
AC009509.3-201ENST00000542428 NEUROD2Q15784 382 aa13.77□□□□□ -0.21
AC009509.3-201ENST00000542428 MYH14Q7Z406 1995 aaKnown RBP13.77□□□□□ -0.21
AC009509.3-201ENST00000542428 SYTL4Q96C24 671 aaPredicted RBP13.77□□□□□ -0.21
AC009509.3-201ENST00000542428 THUMPD2Q9BTF0 503 aaKnown RBP13.77□□□□□ -0.21
AC009509.3-201ENST00000542428 LGR6Q9HBX8 967 aa13.77□□□□□ -0.21
AC009509.3-201ENST00000542428 SCN7AQ01118 1682 aa13.76□□□□□ -0.21
AC009509.3-201ENST00000542428 RIPK4P57078 832 aa13.76□□□□□ -0.21
AC009509.3-201ENST00000542428 IL17REQ8NFR9 667 aa13.76□□□□□ -0.21
AC009509.3-201ENST00000542428 TRIM35Q9UPQ4 493 aa13.76□□□□□ -0.21
AC009509.3-201ENST00000542428 PRIM1P49642 420 aaKnown RBP13.75□□□□□ -0.21
AC009509.3-201ENST00000542428 LMOD3Q0VAK6 560 aa13.75□□□□□ -0.21
AC009509.3-201ENST00000542428 RTF1Q92541 710 aaKnown RBP13.75□□□□□ -0.21
AC009509.3-201ENST00000542428 SLC52A2Q9HAB3 445 aa13.75□□□□□ -0.21
AC009509.3-201ENST00000542428 TMOD3Q9NYL9 352 aa13.75□□□□□ -0.21
AC009509.3-201ENST00000542428 PALLDQ8WX93 1383 aa13.74□□□□□ -0.21
AC009509.3-201ENST00000542428 CASZ1Q86V15 1759 aa13.74□□□□□ -0.21
AC009509.3-201ENST00000542428 CACNB1Q02641 598 aaPredicted RBP13.74□□□□□ -0.21
AC009509.3-201ENST00000542428 ERVV-2B6SEH9 535 aa13.73□□□□□ -0.21
AC009509.3-201ENST00000542428 HTATSF1O43719 755 aaKnown RBP13.73□□□□□ -0.21
AC009509.3-201ENST00000542428 CABP4P57796 275 aa13.73□□□□□ -0.21
AC009509.3-201ENST00000542428 BCL11BQ9C0K0 894 aaPredicted RBP13.73□□□□□ -0.21
AC009509.3-201ENST00000542428 ANKRD36CQ5JPF3 1778 aa13.73□□□□□ -0.21
AC009509.3-201ENST00000542428 CACNA1FO60840 1977 aa13.72□□□□□ -0.21
AC009509.3-201ENST00000542428 TEFQ10587 303 aa13.72□□□□□ -0.21
AC009509.3-201ENST00000542428 PIGBQ92521 554 aa13.72□□□□□ -0.21
AC009509.3-201ENST00000542428 UPF1Q92900 1129 aaKnown RBP eCLIP13.72□□□□□ -0.21
AC009509.3-201ENST00000542428 SALL2Q9Y467 1007 aaPredicted RBP13.72□□□□□ -0.21
AC009509.3-201ENST00000542428 ZNF521Q96K83 1311 aa13.71□□□□□ -0.21
AC009509.3-201ENST00000542428 CCDC27Q2M243 656 aa13.71□□□□□ -0.21
AC009509.3-201ENST00000542428 N4BP2Q86UW6 1770 aaPredicted RBP13.71□□□□□ -0.22
AC009509.3-201ENST00000542428 ARFGEF2Q9Y6D5 1785 aa13.71□□□□□ -0.22
AC009509.3-201ENST00000542428 NFATC2IPQ8NCF5 419 aa13.7□□□□□ -0.22
AC009509.3-201ENST00000542428 WWC1Q8IX03 1113 aa13.69□□□□□ -0.22
AC009509.3-201ENST00000542428 ASAP1Q9ULH1 1129 aa13.69□□□□□ -0.22
AC009509.3-201ENST00000542428 COL24A1Q17RW2 1714 aa13.69□□□□□ -0.22
AC009509.3-201ENST00000542428 APBA3O96018 575 aa13.68□□□□□ -0.22
AC009509.3-201ENST00000542428 HNRNPUQ00839 825 aaKnown RBP eCLIP13.68□□□□□ -0.22
AC009509.3-201ENST00000542428 SLC39A6Q13433 755 aa13.68□□□□□ -0.22
AC009509.3-201ENST00000542428 NCBP3Q53F19 620 aaKnown RBP13.68□□□□□ -0.22
AC009509.3-201ENST00000542428 DEFB132Q7Z7B7 95 aa13.68□□□□□ -0.22
AC009509.3-201ENST00000542428 ATG3Q9NT62 314 aa13.68□□□□□ -0.22
AC009509.3-201ENST00000542428 BAG6P46379 1132 aa13.67□□□□□ -0.22
AC009509.3-201ENST00000542428 SF3B2Q13435 895 aaKnown RBP13.67□□□□□ -0.22
AC009509.3-201ENST00000542428 AFDNP55196 1824 aaKnown RBP13.67□□□□□ -0.22
AC009509.3-201ENST00000542428 BTBD11A6QL63 1104 aa13.66□□□□□ -0.22
AC009509.3-201ENST00000542428 KCNQ3O43525 872 aa13.66□□□□□ -0.22
AC009509.3-201ENST00000542428 EN1Q05925 392 aaPredicted RBP13.66□□□□□ -0.22
AC009509.3-201ENST00000542428 HEG1Q9ULI3 1381 aa13.66□□□□□ -0.22
AC009509.3-201ENST00000542428 NUP98P52948 1817 aa13.66□□□□□ -0.22
AC009509.3-201ENST00000542428 EZH2Q15910 746 aaKnown RBP13.65□□□□□ -0.22
AC009509.3-201ENST00000542428 ZNF790Q6PG37 636 aa13.65□□□□□ -0.22
AC009509.3-201ENST00000542428 CCDC125Q86Z20 511 aa13.65□□□□□ -0.22
AC009509.3-201ENST00000542428 TTC5Q8N0Z6 440 aa13.65□□□□□ -0.22
AC009509.3-201ENST00000542428 NGEFQ8N5V2 710 aa13.65□□□□□ -0.22
AC009509.3-201ENST00000542428 IFT57Q9NWB7 429 aa13.65□□□□□ -0.22
AC009509.3-201ENST00000542428 MIS18AQ9NYP9 233 aa13.65□□□□□ -0.22
AC009509.3-201ENST00000542428 TSPYL4Q9UJ04 414 aa13.65□□□□□ -0.22
AC009509.3-201ENST00000542428 ZBED9Q6R2W3 1325 aa13.64□□□□□ -0.23
AC009509.3-201ENST00000542428 FANCIQ9NVI1 1328 aa13.64□□□□□ -0.23
AC009509.3-201ENST00000542428 PLSCR1O15162 318 aa13.64□□□□□ -0.23
AC009509.3-201ENST00000542428 ZNF853P0CG23 659 aa13.64□□□□□ -0.23
AC009509.3-201ENST00000542428 CALD1Q05682 793 aaKnown RBP13.64□□□□□ -0.23
AC009509.3-201ENST00000542428 TAF7Q15545 349 aaPredicted RBP13.64□□□□□ -0.23
AC009509.3-201ENST00000542428 POTEHQ6S545 545 aa13.64□□□□□ -0.23
AC009509.3-201ENST00000542428 SMARCC1Q92922 1105 aaPredicted RBP13.64□□□□□ -0.23
AC009509.3-201ENST00000542428 SLC4A9Q96Q91 983 aa13.64□□□□□ -0.23
AC009509.3-201ENST00000542428 LAS1LQ9Y4W2 734 aaKnown RBP13.64□□□□□ -0.23
AC009509.3-201ENST00000542428 IL16Q14005 1332 aa13.64□□□□□ -0.23
AC009509.3-201ENST00000542428 LOC102724428A0A0B4J2F2 783 aa13.63□□□□□ -0.23
AC009509.3-201ENST00000542428 PTCD1O75127 700 aaKnown RBP13.63□□□□□ -0.23
AC009509.3-201ENST00000542428 KCNQ4P56696 695 aa13.63□□□□□ -0.23
AC009509.3-201ENST00000542428 SIK1P57059 783 aa13.63□□□□□ -0.23
AC009509.3-201ENST00000542428 TXNRD1Q16881 649 aa13.63□□□□□ -0.23
AC009509.3-201ENST00000542428 TSR2Q969E8 191 aaKnown RBP13.63□□□□□ -0.23
AC009509.3-201ENST00000542428 ZNF496Q96IT1 587 aaPredicted RBP13.63□□□□□ -0.23
AC009509.3-201ENST00000542428 CFAP44Q96MT7 982 aa13.63□□□□□ -0.23
AC009509.3-201ENST00000542428 CAMKK2Q96RR4 588 aa13.63□□□□□ -0.23
AC009509.3-201ENST00000542428 SPINK5Q9NQ38 1064 aaPredicted RBP13.63□□□□□ -0.23
AC009509.3-201ENST00000542428 MBIPQ9NS73 344 aa13.63□□□□□ -0.23
AC009509.3-201ENST00000542428 CCNL1Q9UK58 526 aaPredicted RBP13.63□□□□□ -0.23
AC009509.3-201ENST00000542428 ITPK1Q13572 414 aa13.62□□□□□ -0.23
AC009509.3-201ENST00000542428 RBM42Q9BTD8 480 aaKnown RBP13.62□□□□□ -0.23
AC009509.3-201ENST00000542428 LRRC4BQ9NT99 713 aa13.62□□□□□ -0.23
AC009509.3-201ENST00000542428 PRAMEF22A3QJZ6 481 aa13.61□□□□□ -0.23
AC009509.3-201ENST00000542428 CHL1O00533 1208 aa13.61□□□□□ -0.23
AC009509.3-201ENST00000542428 SOCS7O14512 581 aa13.61□□□□□ -0.23
AC009509.3-201ENST00000542428 GNAI1P63096 354 aa13.61□□□□□ -0.23
AC009509.3-201ENST00000542428 KRT24Q2M2I5 525 aa13.61□□□□□ -0.23
AC009509.3-201ENST00000542428 WDR63Q8IWG1 891 aa13.61□□□□□ -0.23
AC009509.3-201ENST00000542428 FMNL2Q96PY5 1086 aa13.61□□□□□ -0.23
AC009509.3-201ENST00000542428 ANO8Q9HCE9 1232 aaPredicted RBP13.61□□□□□ -0.23
AC009509.3-201ENST00000542428 EIF4A1P60842 406 aaKnown RBP13.6□□□□□ -0.23
AC009509.3-201ENST00000542428 SLC27A3Q5K4L6 730 aa13.6□□□□□ -0.23
AC009509.3-201ENST00000542428 PROM2Q8N271 834 aa13.6□□□□□ -0.23
AC009509.3-201ENST00000542428 LINC00116Q8NCU8 138 aa13.6□□□□□ -0.23
AC009509.3-201ENST00000542428 YTHDC1Q96MU7 727 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms