RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 FLAD1Q8NFF5 587 aa22.17■■□□□ 1.14
CCND1-205ENST00000542367 ITPK1Q13572 414 aa22.16■■□□□ 1.14
CCND1-205ENST00000542367 C4BP0C0L5 1744 aa22.16■■□□□ 1.14
CCND1-205ENST00000542367 AKAP4Q5JQC9 854 aa22.15■■□□□ 1.14
CCND1-205ENST00000542367 AMIGO3Q86WK7 504 aa22.15■■□□□ 1.14
CCND1-205ENST00000542367 SMIM5Q71RC9 77 aa22.14■■□□□ 1.13
CCND1-205ENST00000542367 NFATC2IPQ8NCF5 419 aa22.14■■□□□ 1.13
CCND1-205ENST00000542367 RBM42Q9BTD8 480 aaKnown RBP22.14■■□□□ 1.13
CCND1-205ENST00000542367 COL24A1Q17RW2 1714 aa22.14■■□□□ 1.13
CCND1-205ENST00000542367 PHF14O94880 888 aa22.13■■□□□ 1.13
CCND1-205ENST00000542367 MSL1Q68DK7 614 aa22.13■■□□□ 1.13
CCND1-205ENST00000542367 COL3A1P02461 1466 aaPredicted RBP22.12■■□□□ 1.13
CCND1-205ENST00000542367 U2SURPO15042 1029 aaKnown RBP22.12■■□□□ 1.13
CCND1-205ENST00000542367 KLHL34Q8N239 644 aa22.12■■□□□ 1.13
CCND1-205ENST00000542367 SLC4A9Q96Q91 983 aa22.12■■□□□ 1.13
CCND1-205ENST00000542367 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.11■■□□□ 1.13
CCND1-205ENST00000542367 MTHFSDQ2M296 383 aaKnown RBP22.11■■□□□ 1.13
CCND1-205ENST00000542367 MAP3K5Q99683 1374 aa22.11■■□□□ 1.13
CCND1-205ENST00000542367 SSFA2P28290 1259 aa22.1■■□□□ 1.13
CCND1-205ENST00000542367 UBR3Q6ZT12 1888 aa22.1■■□□□ 1.13
CCND1-205ENST00000542367 LGR6Q9HBX8 967 aa22.1■■□□□ 1.13
CCND1-205ENST00000542367 GNPATO15228 680 aa22.09■■□□□ 1.13
CCND1-205ENST00000542367 SCN11AQ9UI33 1791 aa22.08■■□□□ 1.13
CCND1-205ENST00000542367 PTCD1O75127 700 aaKnown RBP22.08■■□□□ 1.13
CCND1-205ENST00000542367 CFAP53Q96M91 514 aa22.08■■□□□ 1.13
CCND1-205ENST00000542367 RNMTO43148 476 aaKnown RBP22.07■■□□□ 1.12
CCND1-205ENST00000542367 PPP2R1AP30153 589 aa22.07■■□□□ 1.12
CCND1-205ENST00000542367 SLC52A2Q9HAB3 445 aa22.07■■□□□ 1.12
CCND1-205ENST00000542367 YY1P25490 414 aa22.05■■□□□ 1.12
CCND1-205ENST00000542367 UTRNP46939 3433 aa22.05■■□□□ 1.12
CCND1-205ENST00000542367 ZNF831Q5JPB2 1677 aa22.04■■□□□ 1.12
CCND1-205ENST00000542367 RC3H1Q5TC82 1133 aaKnown RBP22.04■■□□□ 1.12
CCND1-205ENST00000542367 RTCBQ9Y3I0 505 aaKnown RBP22.04■■□□□ 1.12
CCND1-205ENST00000542367 NLGN2Q8NFZ4 835 aa22.03■■□□□ 1.12
CCND1-205ENST00000542367 NUDCQ9Y266 331 aa22.03■■□□□ 1.12
CCND1-205ENST00000542367 TRAPPC3LQ5T215 181 aa22.02■■□□□ 1.12
CCND1-205ENST00000542367 GAS2L2Q8NHY3 880 aa22.01■■□□□ 1.11
CCND1-205ENST00000542367 CNTNAP4Q9C0A0 1308 aa22.01■■□□□ 1.11
CCND1-205ENST00000542367 COL5A3P25940 1745 aaPredicted RBP22■■□□□ 1.11
CCND1-205ENST00000542367 RPS6KA4O75676 772 aa22■■□□□ 1.11
CCND1-205ENST00000542367 SLC39A6Q13433 755 aa22■■□□□ 1.11
CCND1-205ENST00000542367 GPR162Q16538 588 aa22■■□□□ 1.11
CCND1-205ENST00000542367 RSPH6AQ9H0K4 717 aa22■■□□□ 1.11
CCND1-205ENST00000542367 VIRMAQ69YN4 1812 aaKnown RBP22■■□□□ 1.11
CCND1-205ENST00000542367 MRC1P22897 1456 aa21.99■■□□□ 1.11
CCND1-205ENST00000542367 GNAT3A8MTJ3 354 aa21.99■■□□□ 1.11
CCND1-205ENST00000542367 PRKAR2BP31323 418 aa21.99■■□□□ 1.11
CCND1-205ENST00000542367 ARHGEF1Q92888 912 aaKnown RBP21.99■■□□□ 1.11
CCND1-205ENST00000542367 MYH14Q7Z406 1995 aaKnown RBP21.98■■□□□ 1.11
CCND1-205ENST00000542367 U2AF1L5P0DN76 240 aaPredicted RBP21.98■■□□□ 1.11
CCND1-205ENST00000542367 CRKLP46109 303 aaKnown RBP21.98■■□□□ 1.11
CCND1-205ENST00000542367 U2AF1Q01081 240 aaKnown RBP eCLIP21.98■■□□□ 1.11
CCND1-205ENST00000542367 PELP1Q8IZL8 1130 aaKnown RBP21.98■■□□□ 1.11
CCND1-205ENST00000542367 PHACTR3Q96KR7 559 aa21.98■■□□□ 1.11
CCND1-205ENST00000542367 CD2APQ9Y5K6 639 aa21.98■■□□□ 1.11
CCND1-205ENST00000542367 ADAMTS7Q9UKP4 1686 aa21.98■■□□□ 1.11
CCND1-205ENST00000542367 ADRA2BP18089 450 aa21.97■■□□□ 1.11
CCND1-205ENST00000542367 IL17REQ8NFR9 667 aa21.97■■□□□ 1.11
CCND1-205ENST00000542367 GOLGB1Q14789 3259 aaKnown RBP21.96■■□□□ 1.11
CCND1-205ENST00000542367 RFC4P35249 363 aa21.96■■□□□ 1.11
CCND1-205ENST00000542367 DNAJC10Q8IXB1 793 aa21.96■■□□□ 1.11
CCND1-205ENST00000542367 TJP1Q07157 1748 aa21.94■■□□□ 1.1
CCND1-205ENST00000542367 FCHSD2O94868 740 aa21.94■■□□□ 1.1
CCND1-205ENST00000542367 TEFQ10587 303 aa21.94■■□□□ 1.1
CCND1-205ENST00000542367 INTS5Q6P9B9 1019 aaKnown RBP21.94■■□□□ 1.1
CCND1-205ENST00000542367 MMP10P09238 476 aa21.93■■□□□ 1.1
CCND1-205ENST00000542367 NLGN1Q8N2Q7 840 aa21.93■■□□□ 1.1
CCND1-205ENST00000542367 GYS1P13807 737 aa21.92■■□□□ 1.1
CCND1-205ENST00000542367 CICQ96RK0 1608 aaPredicted RBP21.91■■□□□ 1.1
CCND1-205ENST00000542367 KCPQ6ZWJ8 1503 aa21.91■■□□□ 1.1
CCND1-205ENST00000542367 CYP19A1P11511 503 aaPredicted RBP21.91■■□□□ 1.1
CCND1-205ENST00000542367 TTC5Q8N0Z6 440 aa21.91■■□□□ 1.1
CCND1-205ENST00000542367 DDX10Q13206 875 aaKnown RBP21.9■■□□□ 1.1
CCND1-205ENST00000542367 VSIG10Q8N0Z9 540 aa21.9■■□□□ 1.1
CCND1-205ENST00000542367 CCDC87Q9NVE4 849 aa21.9■■□□□ 1.1
CCND1-205ENST00000542367 YBX3P16989 372 aaKnown RBP eCLIP21.89■■□□□ 1.09
CCND1-205ENST00000542367 CHD4Q14839 1912 aa21.88■■□□□ 1.09
CCND1-205ENST00000542367 CEMIPQ8WUJ3 1361 aa21.88■■□□□ 1.09
CCND1-205ENST00000542367 ZNF790Q6PG37 636 aa21.88■■□□□ 1.09
CCND1-205ENST00000542367 SRP68Q9UHB9 627 aaKnown RBP21.88■■□□□ 1.09
CCND1-205ENST00000542367 C4AP0C0L4 1744 aa21.87■■□□□ 1.09
CCND1-205ENST00000542367 ZNF496Q96IT1 587 aaPredicted RBP21.87■■□□□ 1.09
CCND1-205ENST00000542367 USP42Q9H9J4 1324 aaKnown RBP21.86■■□□□ 1.09
CCND1-205ENST00000542367 GRIN3BO60391 1043 aa21.86■■□□□ 1.09
CCND1-205ENST00000542367 RTF1Q92541 710 aaKnown RBP21.86■■□□□ 1.09
CCND1-205ENST00000542367 UBR2Q8IWV8 1755 aa21.86■■□□□ 1.09
CCND1-205ENST00000542367 SOS1Q07889 1333 aaPredicted RBP21.85■■□□□ 1.09
CCND1-205ENST00000542367 SIPA1L3O60292 1781 aaPredicted RBP21.85■■□□□ 1.09
CCND1-205ENST00000542367 BTBD11A6QL63 1104 aa21.85■■□□□ 1.09
CCND1-205ENST00000542367 FKBP8Q14318 412 aa21.85■■□□□ 1.09
CCND1-205ENST00000542367 ZBTB1Q9Y2K1 713 aa21.85■■□□□ 1.09
CCND1-205ENST00000542367 PARP3Q9Y6F1 533 aa21.85■■□□□ 1.09
CCND1-205ENST00000542367 STARD3NLO95772 234 aa21.84■■□□□ 1.09
CCND1-205ENST00000542367 RALBP1Q15311 655 aa21.84■■□□□ 1.09
CCND1-205ENST00000542367 MCM10Q7L590 875 aa21.84■■□□□ 1.09
CCND1-205ENST00000542367 HEG1Q9ULI3 1381 aa21.84■■□□□ 1.09
CCND1-205ENST00000542367 KCNQ3O43525 872 aa21.83■■□□□ 1.09
CCND1-205ENST00000542367 ZPR1O75312 459 aa21.83■■□□□ 1.09
CCND1-205ENST00000542367 DCTN1Q14203 1278 aa21.83■■□□□ 1.09
CCND1-205ENST00000542367 WWC3Q9ULE0 1092 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms