RNA–Protein interactions for RNA: ENST00000541549.2

EIF3A-203, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EIF3A, Length 4,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-203ENST00000541549 PRIMPOLQ96LW4 560 aa14.12□□□□□ -0.15
EIF3A-203ENST00000541549 CENPHQ9H3R5 247 aa14.12□□□□□ -0.15
EIF3A-203ENST00000541549 PPFIA3O75145 1194 aa14.12□□□□□ -0.15
EIF3A-203ENST00000541549 PTPN23Q9H3S7 1636 aa14.11□□□□□ -0.15
EIF3A-203ENST00000541549 TAF7Q15545 349 aaPredicted RBP14.11□□□□□ -0.15
EIF3A-203ENST00000541549 NME9Q86XW9 330 aa14.11□□□□□ -0.15
EIF3A-203ENST00000541549 CCDC8Q9H0W5 538 aaPredicted RBP14.11□□□□□ -0.15
EIF3A-203ENST00000541549 FAM83GA6ND36 823 aa14.11□□□□□ -0.15
EIF3A-203ENST00000541549 GJB2P29033 226 aa14.11□□□□□ -0.15
EIF3A-203ENST00000541549 UBE2HP62256 183 aa14.11□□□□□ -0.15
EIF3A-203ENST00000541549 HSP90AB3PQ58FF7 597 aa14.11□□□□□ -0.15
EIF3A-203ENST00000541549 SAMD1Q6SPF0 538 aaPredicted RBP14.11□□□□□ -0.15
EIF3A-203ENST00000541549 DEF6Q9H4E7 631 aa14.11□□□□□ -0.15
EIF3A-203ENST00000541549 CNNM1Q9NRU3 951 aa14.11□□□□□ -0.15
EIF3A-203ENST00000541549 KIAA0754O94854 1291 aa14.11□□□□□ -0.15
EIF3A-203ENST00000541549 FBLN1P23142 703 aa14.11□□□□□ -0.15
EIF3A-203ENST00000541549 TAF3Q5VWG9 929 aa14.11□□□□□ -0.15
EIF3A-203ENST00000541549 CCDC191Q8NCU4 936 aa14.11□□□□□ -0.15
EIF3A-203ENST00000541549 BIN1O00499 593 aa14.11□□□□□ -0.15
EIF3A-203ENST00000541549 EPB41L2O43491 1005 aaKnown RBP14.11□□□□□ -0.15
EIF3A-203ENST00000541549 CCDC181Q5TID7 509 aa14.11□□□□□ -0.15
EIF3A-203ENST00000541549 DHX37Q8IY37 1157 aaKnown RBP14.11□□□□□ -0.15
EIF3A-203ENST00000541549 HECW1Q76N89 1606 aa14.1□□□□□ -0.15
EIF3A-203ENST00000541549 GTF2F1P35269 517 aaKnown RBP eCLIP14.1□□□□□ -0.15
EIF3A-203ENST00000541549 FAM69CQ0P6D2 419 aa14.1□□□□□ -0.15
EIF3A-203ENST00000541549 ESCO1Q5FWF5 840 aa14.1□□□□□ -0.15
EIF3A-203ENST00000541549 CCDC85AQ96PX6 553 aaPredicted RBP14.1□□□□□ -0.15
EIF3A-203ENST00000541549 SLC26A8Q96RN1 970 aa14.1□□□□□ -0.15
EIF3A-203ENST00000541549 CEP126Q9P2H0 1117 aa14.1□□□□□ -0.15
EIF3A-203ENST00000541549 PLEKHH1Q9ULM0 1364 aa14.1□□□□□ -0.15
EIF3A-203ENST00000541549 TOPBP1Q92547 1522 aa14.1□□□□□ -0.15
EIF3A-203ENST00000541549 DDX19AQ9NUU7 478 aaKnown RBP14.1□□□□□ -0.15
EIF3A-203ENST00000541549 BTBD11A6QL63 1104 aa14.09□□□□□ -0.15
EIF3A-203ENST00000541549 KLHL10Q6JEL2 608 aa14.09□□□□□ -0.15
EIF3A-203ENST00000541549 SNX21Q969T3 373 aa14.09□□□□□ -0.15
EIF3A-203ENST00000541549 NUDT16Q96DE0 195 aaKnown RBP14.09□□□□□ -0.15
EIF3A-203ENST00000541549 IGSF3O75054 1194 aa14.09□□□□□ -0.15
EIF3A-203ENST00000541549 C16orf71Q8IYS4 520 aaPredicted RBP14.09□□□□□ -0.15
EIF3A-203ENST00000541549 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.09□□□□□ -0.157e-12■□□□□ 10
EIF3A-203ENST00000541549 SPINK5Q9NQ38 1064 aaPredicted RBP14.09□□□□□ -0.15
EIF3A-203ENST00000541549 DHX29Q7Z478 1369 aaKnown RBP14.09□□□□□ -0.15
EIF3A-203ENST00000541549 RAB3GAP1Q15042 981 aa14.09□□□□□ -0.15
EIF3A-203ENST00000541549 TMX1Q9H3N1 280 aa14.09□□□□□ -0.15
EIF3A-203ENST00000541549 MBIPQ9NS73 344 aa14.09□□□□□ -0.15
EIF3A-203ENST00000541549 TCEAL9Q9UHQ7 104 aa14.09□□□□□ -0.15
EIF3A-203ENST00000541549 CCDC69A6NI79 296 aa14.09□□□□□ -0.15
EIF3A-203ENST00000541549 RAPGEF3O95398 923 aa14.09□□□□□ -0.15
EIF3A-203ENST00000541549 ZFYVE27Q5T4F4 411 aa14.09□□□□□ -0.15
EIF3A-203ENST00000541549 CTNNA3Q9UI47 895 aa14.09□□□□□ -0.15
EIF3A-203ENST00000541549 ARHGEF11O15085 1522 aa14.09□□□□□ -0.15
EIF3A-203ENST00000541549 GNAT3A8MTJ3 354 aa14.08□□□□□ -0.15
EIF3A-203ENST00000541549 TOP1P11387 765 aaKnown RBP14.08□□□□□ -0.15
EIF3A-203ENST00000541549 ZGPATQ8N5A5 531 aaKnown RBP14.08□□□□□ -0.15
EIF3A-203ENST00000541549 PRM3Q9NNZ6 103 aa14.08□□□□□ -0.15
EIF3A-203ENST00000541549 KIF4BQ2VIQ3 1234 aa14.08□□□□□ -0.16
EIF3A-203ENST00000541549 CCDC186Q7Z3E2 898 aa14.08□□□□□ -0.16
EIF3A-203ENST00000541549 MEIS3Q99687 375 aa14.08□□□□□ -0.16
EIF3A-203ENST00000541549 PARD3Q8TEW0 1356 aa14.08□□□□□ -0.16
EIF3A-203ENST00000541549 RPGRIP1LQ68CZ1 1315 aa14.08□□□□□ -0.16
EIF3A-203ENST00000541549 CCT2P78371 535 aaKnown RBP14.08□□□□□ -0.16
EIF3A-203ENST00000541549 CCDC57Q2TAC2 916 aa14.08□□□□□ -0.16
EIF3A-203ENST00000541549 UVSSAQ2YD98 709 aa14.08□□□□□ -0.16
EIF3A-203ENST00000541549 FSIP1Q8NA03 581 aa14.08□□□□□ -0.16
EIF3A-203ENST00000541549 CNPY2Q9Y2B0 182 aa14.08□□□□□ -0.16
EIF3A-203ENST00000541549 ZSCAN12O43309 604 aa14.07□□□□□ -0.16
EIF3A-203ENST00000541549 FLIIQ13045 1269 aa14.07□□□□□ -0.16
EIF3A-203ENST00000541549 USP48Q86UV5 1035 aa14.07□□□□□ -0.16
EIF3A-203ENST00000541549 SMC5Q8IY18 1101 aa14.07□□□□□ -0.16
EIF3A-203ENST00000541549 TCEANC2Q96MN5 208 aa14.07□□□□□ -0.16
EIF3A-203ENST00000541549 CDKL5O76039 1030 aa14.07□□□□□ -0.16
EIF3A-203ENST00000541549 HSP90AB2PQ58FF8 381 aa14.07□□□□□ -0.16
EIF3A-203ENST00000541549 CDK5RAP3Q96JB5 506 aa14.07□□□□□ -0.16
EIF3A-203ENST00000541549 CALCOCO1Q9P1Z2 691 aa14.07□□□□□ -0.16
EIF3A-203ENST00000541549 GOLGA6L10A6NI86 522 aa14.07□□□□□ -0.16
EIF3A-203ENST00000541549 NECAB1Q8N987 351 aa14.07□□□□□ -0.16
EIF3A-203ENST00000541549 CAMSAP2Q08AD1 1489 aa14.07□□□□□ -0.16
EIF3A-203ENST00000541549 STIM1Q13586 685 aa14.07□□□□□ -0.16
EIF3A-203ENST00000541549 C8orf76Q96K31 380 aa14.07□□□□□ -0.16
EIF3A-203ENST00000541549 CCDC43Q96MW1 224 aaKnown RBP14.07□□□□□ -0.16
EIF3A-203ENST00000541549 TMC6Q7Z403 805 aa14.06□□□□□ -0.16
EIF3A-203ENST00000541549 CCDC82Q8N4S0 544 aa14.06□□□□□ -0.16
EIF3A-203ENST00000541549 CRACR2AQ9BSW2 395 aa14.06□□□□□ -0.16
EIF3A-203ENST00000541549 U3KPZ7 1027 aaPredicted RBP14.06□□□□□ -0.16
EIF3A-203ENST00000541549 IDH1O75874 414 aaKnown RBP14.06□□□□□ -0.16
EIF3A-203ENST00000541549 ISM2Q6H9L7 571 aa14.06□□□□□ -0.16
EIF3A-203ENST00000541549 CPLX3Q8WVH0 158 aa14.06□□□□□ -0.16
EIF3A-203ENST00000541549 NACAP1Q9BZK3 213 aa14.06□□□□□ -0.16
EIF3A-203ENST00000541549 CCAR1Q8IX12 1150 aaKnown RBP14.06□□□□□ -0.16
EIF3A-203ENST00000541549 PIBF1Q8WXW3 757 aa14.06□□□□□ -0.16
EIF3A-203ENST00000541549 TANGO6Q9C0B7 1094 aa14.06□□□□□ -0.16
EIF3A-203ENST00000541549 ZSCAN22P10073 491 aaPredicted RBP14.05□□□□□ -0.16
EIF3A-203ENST00000541549 ZSWIM4Q9H7M6 989 aa14.05□□□□□ -0.16
EIF3A-203ENST00000541549 JAKMIP3Q5VZ66 844 aa14.05□□□□□ -0.16
EIF3A-203ENST00000541549 CEP135Q66GS9 1140 aa14.05□□□□□ -0.16
EIF3A-203ENST00000541549 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.05□□□□□ -0.16
EIF3A-203ENST00000541549 V9GYY5 206 aaPredicted RBP14.05□□□□□ -0.16
EIF3A-203ENST00000541549 EIF5P55010 431 aaKnown RBP14.05□□□□□ -0.16
EIF3A-203ENST00000541549 IMMTQ16891 758 aaKnown RBP14.05□□□□□ -0.16
EIF3A-203ENST00000541549 ECHDC1Q9NTX5 307 aa14.05□□□□□ -0.16
EIF3A-203ENST00000541549 CTAGE5O15320 804 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms