RNA–Protein interactions for RNA: ENST00000540301.1

KLHL42-203, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-203ENST00000540301 TMF1P82094 1093 aa11.74□□□□□ -0.53
KLHL42-203ENST00000540301 RAPGEF4Q8WZA2 1011 aa11.74□□□□□ -0.53
KLHL42-203ENST00000540301 ZC3H4Q9UPT8 1303 aaKnown RBP11.74□□□□□ -0.53
KLHL42-203ENST00000540301 RAB3GAP2Q9H2M9 1393 aa11.74□□□□□ -0.53
KLHL42-203ENST00000540301 RGPD2P0DJD1 1756 aa11.74□□□□□ -0.53
KLHL42-203ENST00000540301 SBF1O95248 1867 aa11.74□□□□□ -0.53
KLHL42-203ENST00000540301 HOXC9P31274 260 aa11.73□□□□□ -0.53
KLHL42-203ENST00000540301 AMPHP49418 695 aa11.73□□□□□ -0.53
KLHL42-203ENST00000540301 TRAPPC3LQ5T215 181 aa11.73□□□□□ -0.53
KLHL42-203ENST00000540301 PCDH11XQ9BZA7 1347 aa11.73□□□□□ -0.53
KLHL42-203ENST00000540301 PCDH11YQ9BZA8 1340 aa11.73□□□□□ -0.53
KLHL42-203ENST00000540301 PARP3Q9Y6F1 533 aa11.73□□□□□ -0.53
KLHL42-203ENST00000540301 TATP17735 454 aaPredicted RBP11.72□□□□□ -0.53
KLHL42-203ENST00000540301 LBX1P52954 281 aa11.72□□□□□ -0.53
KLHL42-203ENST00000540301 NBPF6Q5VWK0 638 aa11.72□□□□□ -0.53
KLHL42-203ENST00000540301 PIGBQ92521 554 aa11.72□□□□□ -0.53
KLHL42-203ENST00000540301 NBPF4Q96M43 638 aa11.72□□□□□ -0.53
KLHL42-203ENST00000540301 MAP3K19Q56UN5 1328 aa11.71□□□□□ -0.53
KLHL42-203ENST00000540301 CCDC85CA6NKD9 419 aa11.71□□□□□ -0.53
KLHL42-203ENST00000540301 ATP6V1AP38606 617 aa11.71□□□□□ -0.53
KLHL42-203ENST00000540301 RGS19P49795 217 aa11.71□□□□□ -0.53
KLHL42-203ENST00000540301 ITPK1Q13572 414 aa11.71□□□□□ -0.53
KLHL42-203ENST00000540301 HDGFL2Q7Z4V5 671 aaPredicted RBP11.71□□□□□ -0.53
KLHL42-203ENST00000540301 USHBP1Q8N6Y0 703 aa11.71□□□□□ -0.53
KLHL42-203ENST00000540301 MAP2P11137 1827 aaKnown RBP11.71□□□□□ -0.54
KLHL42-203ENST00000540301 ITGB4P16144 1822 aa11.71□□□□□ -0.54
KLHL42-203ENST00000540301 C4AP0C0L4 1744 aa11.71□□□□□ -0.54
KLHL42-203ENST00000540301 CD163L1Q9NR16 1453 aa11.7□□□□□ -0.54
KLHL42-203ENST00000540301 CNTNAP1P78357 1384 aa11.7□□□□□ -0.54
KLHL42-203ENST00000540301 TMC1Q8TDI8 760 aa11.7□□□□□ -0.54
KLHL42-203ENST00000540301 RTCBQ9Y3I0 505 aaKnown RBP11.7□□□□□ -0.54
KLHL42-203ENST00000540301 CYP27B1O15528 508 aa11.69□□□□□ -0.54
KLHL42-203ENST00000540301 GYS1P13807 737 aa11.69□□□□□ -0.54
KLHL42-203ENST00000540301 LMNB1P20700 586 aa11.69□□□□□ -0.54
KLHL42-203ENST00000540301 RASSF7Q02833 373 aa11.69□□□□□ -0.54
KLHL42-203ENST00000540301 WBP1LQ9NX94 342 aa11.69□□□□□ -0.54
KLHL42-203ENST00000540301 EDC4Q6P2E9 1401 aaKnown RBP11.69□□□□□ -0.54
KLHL42-203ENST00000540301 POTECB2RU33 542 aa11.68□□□□□ -0.54
KLHL42-203ENST00000540301 FBLN1P23142 703 aa11.68□□□□□ -0.54
KLHL42-203ENST00000540301 CHRNA5P30532 468 aa11.68□□□□□ -0.54
KLHL42-203ENST00000540301 CHADLQ6NUI6 762 aa11.68□□□□□ -0.54
KLHL42-203ENST00000540301 ARHGEF1Q92888 912 aaKnown RBP11.68□□□□□ -0.54
KLHL42-203ENST00000540301 KDM6AO15550 1401 aaPredicted RBP11.68□□□□□ -0.54
KLHL42-203ENST00000540301 RFC4P35249 363 aa11.67□□□□□ -0.54
KLHL42-203ENST00000540301 VEGFBP49765 207 aa11.67□□□□□ -0.54
KLHL42-203ENST00000540301 SLC12A5Q9H2X9 1139 aa11.67□□□□□ -0.54
KLHL42-203ENST00000540301 ASAP1Q9ULH1 1129 aa11.67□□□□□ -0.54
KLHL42-203ENST00000540301 HSPA8P11142 646 aaKnown RBP11.66□□□□□ -0.54
KLHL42-203ENST00000540301 DPY19L2Q6NUT2 758 aa11.66□□□□□ -0.54
KLHL42-203ENST00000540301 COG3Q96JB2 828 aa11.66□□□□□ -0.54
KLHL42-203ENST00000540301 TERF2IPQ9NYB0 399 aa11.66□□□□□ -0.54
KLHL42-203ENST00000540301 NKX1-1Q15270 411 aaPredicted RBP11.65□□□□□ -0.54
KLHL42-203ENST00000540301 TMOD3Q9NYL9 352 aa11.65□□□□□ -0.54
KLHL42-203ENST00000540301 SMG6Q86US8 1419 aaKnown RBP11.65□□□□□ -0.54
KLHL42-203ENST00000540301 A0A1W2PP64 1363 aa11.64□□□□□ -0.55
KLHL42-203ENST00000540301 RTL1A6NKG5 1358 aa11.64□□□□□ -0.55
KLHL42-203ENST00000540301 RRS1Q15050 365 aaKnown RBP11.63□□□□□ -0.55
KLHL42-203ENST00000540301 RC3H1Q5TC82 1133 aaKnown RBP11.63□□□□□ -0.55
KLHL42-203ENST00000540301 PPP4R3CPQ6ZMV5 832 aa11.63□□□□□ -0.55
KLHL42-203ENST00000540301 ATG3Q9NT62 314 aa11.63□□□□□ -0.55
KLHL42-203ENST00000540301 TMEM88BA6NKF7 163 aa11.62□□□□□ -0.55
KLHL42-203ENST00000540301 RPS6KA4O75676 772 aa11.62□□□□□ -0.55
KLHL42-203ENST00000540301 POTEIP0CG38 1075 aa11.62□□□□□ -0.55
KLHL42-203ENST00000540301 POTEJP0CG39 1038 aa11.62□□□□□ -0.55
KLHL42-203ENST00000540301 DDR1Q08345 913 aa11.62□□□□□ -0.55
KLHL42-203ENST00000540301 CFAP44Q96MT7 982 aa11.62□□□□□ -0.55
KLHL42-203ENST00000540301 TIAM2Q8IVF5 1701 aa11.62□□□□□ -0.55
KLHL42-203ENST00000540301 VIRMAQ69YN4 1812 aaKnown RBP11.62□□□□□ -0.55
KLHL42-203ENST00000540301 PASKQ96RG2 1323 aa11.61□□□□□ -0.55
KLHL42-203ENST00000540301 CCDC88AQ3V6T2 1871 aa11.61□□□□□ -0.55
KLHL42-203ENST00000540301 MAP2K1Q02750 393 aaPredicted RBP11.61□□□□□ -0.55
KLHL42-203ENST00000540301 FKBP8Q14318 412 aa11.61□□□□□ -0.55
KLHL42-203ENST00000540301 ROCK2O75116 1388 aaKnown RBP11.61□□□□□ -0.55
KLHL42-203ENST00000540301 CNTNAP4Q9C0A0 1308 aa11.6□□□□□ -0.55
KLHL42-203ENST00000540301 HSP90AB2PQ58FF8 381 aa11.6□□□□□ -0.55
KLHL42-203ENST00000540301 SLC4A9Q96Q91 983 aa11.6□□□□□ -0.55
KLHL42-203ENST00000540301 SPG7Q9UQ90 795 aa11.6□□□□□ -0.55
KLHL42-203ENST00000540301 KDRP35968 1356 aa11.59□□□□□ -0.55
KLHL42-203ENST00000540301 DEFB115Q30KQ5 88 aa11.59□□□□□ -0.55
KLHL42-203ENST00000540301 RBM42Q9BTD8 480 aaKnown RBP11.59□□□□□ -0.55
KLHL42-203ENST00000540301 SRP68Q9UHB9 627 aaKnown RBP11.59□□□□□ -0.55
KLHL42-203ENST00000540301 NFKBIEO00221 500 aa11.58□□□□□ -0.56
KLHL42-203ENST00000540301 POLRMTO00411 1230 aaKnown RBP11.58□□□□□ -0.56
KLHL42-203ENST00000540301 ERFEQ4G0M1 354 aa11.58□□□□□ -0.56
KLHL42-203ENST00000540301 LDHDQ86WU2 507 aa11.58□□□□□ -0.56
KLHL42-203ENST00000540301 TTLL6Q8N841 843 aa11.58□□□□□ -0.56
KLHL42-203ENST00000540301 WDR33Q9C0J8 1336 aaKnown RBP11.58□□□□□ -0.56
KLHL42-203ENST00000540301 USP42Q9H9J4 1324 aaKnown RBP11.58□□□□□ -0.56
KLHL42-203ENST00000540301 INSRP06213 1382 aa11.57□□□□□ -0.56
KLHL42-203ENST00000540301 RASSF10A6NK89 507 aa11.57□□□□□ -0.56
KLHL42-203ENST00000540301 DDNO94850 711 aaPredicted RBP11.57□□□□□ -0.56
KLHL42-203ENST00000540301 TM4SF1P30408 202 aa11.57□□□□□ -0.56
KLHL42-203ENST00000540301 L3MBTL2Q969R5 705 aa11.57□□□□□ -0.56
KLHL42-203ENST00000540301 ITGBL1O95965 494 aaPredicted RBP11.56□□□□□ -0.56
KLHL42-203ENST00000540301 IFNL2Q8IZJ0 200 aa11.56□□□□□ -0.56
KLHL42-203ENST00000540301 BEGAINQ9BUH8 593 aa11.56□□□□□ -0.56
KLHL42-203ENST00000540301 MYH14Q7Z406 1995 aaKnown RBP11.56□□□□□ -0.56
KLHL42-203ENST00000540301 ZNF831Q5JPB2 1677 aa11.55□□□□□ -0.56
KLHL42-203ENST00000540301 PDE4DIPQ5VU43 2346 aa11.55□□□□□ -0.56
KLHL42-203ENST00000540301 COL5A3P25940 1745 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms