RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 SSH2Q76I76 1423 aa8.77□□□□□ -1.01
SNHG1-212ENST00000539975 CD163L1Q9NR16 1453 aa8.77□□□□□ -1.01
SNHG1-212ENST00000539975 NSD2O96028 1365 aa8.76□□□□□ -1.01
SNHG1-212ENST00000539975 USP31Q70CQ4 1352 aa8.76□□□□□ -1.01
SNHG1-212ENST00000539975 PPP1R3GB7ZBB8 358 aa8.76□□□□□ -1.01
SNHG1-212ENST00000539975 PPM1GO15355 546 aaPredicted RBP8.76□□□□□ -1.01
SNHG1-212ENST00000539975 CSB-PGBD3P0DP91 1061 aa8.76□□□□□ -1.01
SNHG1-212ENST00000539975 PSEN2P49810 448 aa8.76□□□□□ -1.01
SNHG1-212ENST00000539975 DDX10Q13206 875 aaKnown RBP8.76□□□□□ -1.01
SNHG1-212ENST00000539975 C6orf132Q5T0Z8 1188 aa8.76□□□□□ -1.01
SNHG1-212ENST00000539975 ANKRD13DQ6ZTN6 518 aa8.76□□□□□ -1.01
SNHG1-212ENST00000539975 BTG4Q9NY30 223 aa8.76□□□□□ -1.01
SNHG1-212ENST00000539975 USP19O94966 1318 aa8.76□□□□□ -1.01
SNHG1-212ENST00000539975 AFF2P51816 1311 aa8.76□□□□□ -1.01
SNHG1-212ENST00000539975 SHPRHQ149N8 1683 aa8.75□□□□□ -1.01
SNHG1-212ENST00000539975 KIAA0232Q92628 1395 aa8.75□□□□□ -1.01
SNHG1-212ENST00000539975 FAM83GA6ND36 823 aa8.75□□□□□ -1.01
SNHG1-212ENST00000539975 TNNT2P45379 298 aaPredicted RBP8.75□□□□□ -1.01
SNHG1-212ENST00000539975 CHRNA2Q15822 529 aa8.75□□□□□ -1.01
SNHG1-212ENST00000539975 CC2D1BQ5T0F9 858 aaKnown RBP8.75□□□□□ -1.01
SNHG1-212ENST00000539975 UNC5CLQ8IV45 518 aa8.75□□□□□ -1.01
SNHG1-212ENST00000539975 FNBP4Q8N3X1 1017 aaPredicted RBP8.75□□□□□ -1.01
SNHG1-212ENST00000539975 QTRT2Q9H974 415 aaKnown RBP8.75□□□□□ -1.01
SNHG1-212ENST00000539975 STRN4Q9NRL3 753 aa8.75□□□□□ -1.01
SNHG1-212ENST00000539975 TRPC5Q9UL62 973 aaPredicted RBP8.75□□□□□ -1.01
SNHG1-212ENST00000539975 A0A0G2JS52 829 aa8.74□□□□□ -1.01
SNHG1-212ENST00000539975 TESPA1A2RU30 521 aaPredicted RBP8.74□□□□□ -1.01
SNHG1-212ENST00000539975 SEMA3EO15041 775 aa8.74□□□□□ -1.01
SNHG1-212ENST00000539975 MAP3K7O43318 606 aa8.74□□□□□ -1.01
SNHG1-212ENST00000539975 RXRBP28702 533 aa8.74□□□□□ -1.01
SNHG1-212ENST00000539975 MYT1Q01538 1121 aa8.74□□□□□ -1.01
SNHG1-212ENST00000539975 DMRTA1Q5VZB9 504 aa8.74□□□□□ -1.01
SNHG1-212ENST00000539975 SPNS2Q8IVW8 549 aa8.74□□□□□ -1.01
SNHG1-212ENST00000539975 CPDO75976 1380 aa8.73□□□□□ -1.01
SNHG1-212ENST00000539975 MED1Q15648 1581 aaPredicted RBP8.73□□□□□ -1.01
SNHG1-212ENST00000539975 MLLT3P42568 568 aaPredicted RBP8.73□□□□□ -1.01
SNHG1-212ENST00000539975 ADGRD1Q6QNK2 874 aa8.73□□□□□ -1.01
SNHG1-212ENST00000539975 TOM1L2Q6ZVM7 507 aa8.73□□□□□ -1.01
SNHG1-212ENST00000539975 ARHGEF25Q86VW2 580 aa8.73□□□□□ -1.01
SNHG1-212ENST00000539975 AATKQ6ZMQ8 1374 aa8.73□□□□□ -1.01
SNHG1-212ENST00000539975 COL22A1Q8NFW1 1626 aaPredicted RBP8.72□□□□□ -1.01
SNHG1-212ENST00000539975 TRPM3Q9HCF6 1732 aaPredicted RBP8.72□□□□□ -1.01
SNHG1-212ENST00000539975 PER1O15534 1290 aaPredicted RBP8.72□□□□□ -1.01
SNHG1-212ENST00000539975 ONECUT3O60422 494 aaPredicted RBP8.72□□□□□ -1.01
SNHG1-212ENST00000539975 ZBED2Q9BTP6 218 aa8.72□□□□□ -1.01
SNHG1-212ENST00000539975 LRP6O75581 1613 aa8.72□□□□□ -1.01
SNHG1-212ENST00000539975 SMG6Q86US8 1419 aaKnown RBP8.71□□□□□ -1.01
SNHG1-212ENST00000539975 RBM6P78332 1123 aaKnown RBP8.71□□□□□ -1.02
SNHG1-212ENST00000539975 RRS1Q15050 365 aaKnown RBP8.71□□□□□ -1.02
SNHG1-212ENST00000539975 VPS72Q15906 364 aa8.71□□□□□ -1.02
SNHG1-212ENST00000539975 IP6K1Q92551 441 aa8.71□□□□□ -1.02
SNHG1-212ENST00000539975 CFAP53Q96M91 514 aa8.71□□□□□ -1.02
SNHG1-212ENST00000539975 USP35Q9P2H5 1018 aa8.71□□□□□ -1.02
SNHG1-212ENST00000539975 VPS9D1Q9Y2B5 631 aa8.71□□□□□ -1.02
SNHG1-212ENST00000539975 ALS2Q96Q42 1657 aa8.71□□□□□ -1.02
SNHG1-212ENST00000539975 AKAP12Q02952 1782 aa8.71□□□□□ -1.02
SNHG1-212ENST00000539975 OVOS2A0A0J9YW53 1432 aa8.71□□□□□ -1.02
SNHG1-212ENST00000539975 OVOS2Q6IE36 1432 aa8.71□□□□□ -1.02
SNHG1-212ENST00000539975 COL9A1P20849 921 aa8.7□□□□□ -1.02
SNHG1-212ENST00000539975 LTV1Q96GA3 475 aaPredicted RBP8.7□□□□□ -1.02
SNHG1-212ENST00000539975 GJD4Q96KN9 370 aaPredicted RBP8.7□□□□□ -1.02
SNHG1-212ENST00000539975 NLRP2Q9NX02 1062 aa8.7□□□□□ -1.02
SNHG1-212ENST00000539975 MON2Q7Z3U7 1717 aa8.7□□□□□ -1.02
SNHG1-212ENST00000539975 MAP3K19Q56UN5 1328 aa8.7□□□□□ -1.02
SNHG1-212ENST00000539975 KIF24Q5T7B8 1368 aa8.7□□□□□ -1.02
SNHG1-212ENST00000539975 NPC1L1Q9UHC9 1359 aa8.7□□□□□ -1.02
SNHG1-212ENST00000539975 HOXC9P31274 260 aa8.69□□□□□ -1.02
SNHG1-212ENST00000539975 PRIM1P49642 420 aaKnown RBP8.69□□□□□ -1.02
SNHG1-212ENST00000539975 RALBP1Q15311 655 aa8.69□□□□□ -1.02
SNHG1-212ENST00000539975 ANKRD24Q8TF21 1146 aa8.69□□□□□ -1.02
SNHG1-212ENST00000539975 THRAP3Q9Y2W1 955 aaKnown RBP8.69□□□□□ -1.02
SNHG1-212ENST00000539975 FLT4P35916 1363 aa8.69□□□□□ -1.02
SNHG1-212ENST00000539975 SLIT3O75094 1523 aa8.69□□□□□ -1.02
SNHG1-212ENST00000539975 PIK3C2AO00443 1686 aa8.69□□□□□ -1.02
SNHG1-212ENST00000539975 TULP1O00294 542 aaPredicted RBP8.68□□□□□ -1.02
SNHG1-212ENST00000539975 ANP32CO43423 234 aa8.68□□□□□ -1.02
SNHG1-212ENST00000539975 HRO43593 1189 aa8.68□□□□□ -1.02
SNHG1-212ENST00000539975 FBLN1P23142 703 aa8.68□□□□□ -1.02
SNHG1-212ENST00000539975 TSR1Q2NL82 804 aaKnown RBP8.68□□□□□ -1.02
SNHG1-212ENST00000539975 CDCA7Q9BWT1 371 aaPredicted RBP8.68□□□□□ -1.02
SNHG1-212ENST00000539975 POLKQ9UBT6 870 aa8.68□□□□□ -1.02
SNHG1-212ENST00000539975 EMILIN1Q9Y6C2 1016 aa8.68□□□□□ -1.02
SNHG1-212ENST00000539975 WDR17Q8IZU2 1322 aa8.68□□□□□ -1.02
SNHG1-212ENST00000539975 RTL1A6NKG5 1358 aa8.68□□□□□ -1.02
SNHG1-212ENST00000539975 BLMP54132 1417 aaPredicted RBP8.68□□□□□ -1.02
SNHG1-212ENST00000539975 NRKQ7Z2Y5 1582 aa8.68□□□□□ -1.02
SNHG1-212ENST00000539975 MYOM1P52179 1685 aa8.68□□□□□ -1.02
SNHG1-212ENST00000539975 SLIT2O94813 1529 aa8.67□□□□□ -1.02
SNHG1-212ENST00000539975 MTHFSP49914 203 aa8.67□□□□□ -1.02
SNHG1-212ENST00000539975 LARP1Q6PKG0 1096 aaKnown RBP8.67□□□□□ -1.02
SNHG1-212ENST00000539975 POTEAQ6S8J7 498 aa8.67□□□□□ -1.02
SNHG1-212ENST00000539975 BCL9LQ86UU0 1499 aa8.67□□□□□ -1.02
SNHG1-212ENST00000539975 TCP11L2Q8N4U5 519 aa8.67□□□□□ -1.02
SNHG1-212ENST00000539975 NUDCQ9Y266 331 aa8.67□□□□□ -1.02
SNHG1-212ENST00000539975 COL14A1Q05707 1796 aaKnown RBP8.66□□□□□ -1.02
SNHG1-212ENST00000539975 INSRP06213 1382 aa8.66□□□□□ -1.02
SNHG1-212ENST00000539975 SPATA31A5Q5VU36 1347 aa8.66□□□□□ -1.02
SNHG1-212ENST00000539975 SPATA31A7Q8IWB4 1347 aa8.66□□□□□ -1.02
SNHG1-212ENST00000539975 MMRN1Q13201 1228 aa8.66□□□□□ -1.02
SNHG1-212ENST00000539975 PDE3BQ13370 1112 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms