RNA–Protein interactions for RNA: ENST00000538682.5

SLC3A2-212, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best)

Gene SLC3A2, Length 1,368 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-212ENST00000538682 CHD4Q14839 1912 aa20.32■□□□□ 0.84
SLC3A2-212ENST00000538682 UTRNP46939 3433 aa20.32■□□□□ 0.84
SLC3A2-212ENST00000538682 ADAMTS7Q9UKP4 1686 aa20.32■□□□□ 0.84
SLC3A2-212ENST00000538682 CICQ96RK0 1608 aaPredicted RBP20.32■□□□□ 0.84
SLC3A2-212ENST00000538682 DCAF8L1A6NGE4 600 aa20.32■□□□□ 0.84
SLC3A2-212ENST00000538682 AMIGO3Q86WK7 504 aa20.32■□□□□ 0.84
SLC3A2-212ENST00000538682 FLAD1Q8NFF5 587 aa20.32■□□□□ 0.84
SLC3A2-212ENST00000538682 AK7Q96M32 723 aa20.32■□□□□ 0.84
SLC3A2-212ENST00000538682 MSH5O43196 834 aa20.31■□□□□ 0.84
SLC3A2-212ENST00000538682 ITPK1Q13572 414 aa20.31■□□□□ 0.84
SLC3A2-212ENST00000538682 C1orf141Q5JVX7 400 aa20.31■□□□□ 0.84
SLC3A2-212ENST00000538682 TJP1Q07157 1748 aa20.29■□□□□ 0.84
SLC3A2-212ENST00000538682 MYH14Q7Z406 1995 aaKnown RBP20.29■□□□□ 0.84
SLC3A2-212ENST00000538682 DIAPH1O60610 1272 aaKnown RBP20.29■□□□□ 0.84
SLC3A2-212ENST00000538682 ATP6V1AP38606 617 aa20.29■□□□□ 0.84
SLC3A2-212ENST00000538682 HMOX1P09601 288 aa20.28■□□□□ 0.84
SLC3A2-212ENST00000538682 CABP4P57796 275 aa20.28■□□□□ 0.84
SLC3A2-212ENST00000538682 SLC4A9Q96Q91 983 aa20.28■□□□□ 0.84
SLC3A2-212ENST00000538682 MRC1P22897 1456 aa20.28■□□□□ 0.84
SLC3A2-212ENST00000538682 MSL1Q68DK7 614 aa20.27■□□□□ 0.84
SLC3A2-212ENST00000538682 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.26■□□□□ 0.83
SLC3A2-212ENST00000538682 SSFA2P28290 1259 aa20.26■□□□□ 0.83
SLC3A2-212ENST00000538682 CNGB1Q14028 1251 aaPredicted RBP20.26■□□□□ 0.83
SLC3A2-212ENST00000538682 AKAP4Q5JQC9 854 aa20.26■□□□□ 0.83
SLC3A2-212ENST00000538682 C4AP0C0L4 1744 aa20.26■□□□□ 0.83
SLC3A2-212ENST00000538682 PHF14O94880 888 aa20.25■□□□□ 0.83
SLC3A2-212ENST00000538682 SMIM5Q71RC9 77 aa20.25■□□□□ 0.83
SLC3A2-212ENST00000538682 YY1P25490 414 aa20.24■□□□□ 0.83
SLC3A2-212ENST00000538682 KLHL34Q8N239 644 aa20.24■□□□□ 0.83
SLC3A2-212ENST00000538682 GOLGB1Q14789 3259 aaKnown RBP20.24■□□□□ 0.83
SLC3A2-212ENST00000538682 GNPATO15228 680 aa20.23■□□□□ 0.83
SLC3A2-212ENST00000538682 NFATC2IPQ8NCF5 419 aa20.23■□□□□ 0.83
SLC3A2-212ENST00000538682 RBM42Q9BTD8 480 aaKnown RBP20.23■□□□□ 0.83
SLC3A2-212ENST00000538682 SIPA1L3O60292 1781 aaPredicted RBP20.23■□□□□ 0.83
SLC3A2-212ENST00000538682 UBR2Q8IWV8 1755 aa20.23■□□□□ 0.83
SLC3A2-212ENST00000538682 NLGN2Q8NFZ4 835 aa20.22■□□□□ 0.83
SLC3A2-212ENST00000538682 MTHFSDQ2M296 383 aaKnown RBP20.21■□□□□ 0.83
SLC3A2-212ENST00000538682 CNTNAP4Q9C0A0 1308 aa20.21■□□□□ 0.83
SLC3A2-212ENST00000538682 LGR6Q9HBX8 967 aa20.21■□□□□ 0.83
SLC3A2-212ENST00000538682 RNMTO43148 476 aaKnown RBP20.2■□□□□ 0.82
SLC3A2-212ENST00000538682 RC3H1Q5TC82 1133 aaKnown RBP20.2■□□□□ 0.82
SLC3A2-212ENST00000538682 SLC52A2Q9HAB3 445 aa20.2■□□□□ 0.82
SLC3A2-212ENST00000538682 KIF13BQ9NQT8 1826 aa20.19■□□□□ 0.82
SLC3A2-212ENST00000538682 KCPQ6ZWJ8 1503 aa20.19■□□□□ 0.82
SLC3A2-212ENST00000538682 U2SURPO15042 1029 aaKnown RBP20.18■□□□□ 0.82
SLC3A2-212ENST00000538682 PTCD1O75127 700 aaKnown RBP20.18■□□□□ 0.82
SLC3A2-212ENST00000538682 PPP2R1AP30153 589 aa20.17■□□□□ 0.82
SLC3A2-212ENST00000538682 RTCBQ9Y3I0 505 aaKnown RBP20.17■□□□□ 0.82
SLC3A2-212ENST00000538682 CD2APQ9Y5K6 639 aa20.16■□□□□ 0.82
SLC3A2-212ENST00000538682 KIAA1551Q9HCM1 1747 aa20.16■□□□□ 0.82
SLC3A2-212ENST00000538682 ADRA2BP18089 450 aa20.15■□□□□ 0.82
SLC3A2-212ENST00000538682 GPR162Q16538 588 aa20.15■□□□□ 0.82
SLC3A2-212ENST00000538682 TRAPPC3LQ5T215 181 aa20.15■□□□□ 0.82
SLC3A2-212ENST00000538682 CFAP53Q96M91 514 aa20.15■□□□□ 0.82
SLC3A2-212ENST00000538682 RPS6KA4O75676 772 aa20.14■□□□□ 0.81
SLC3A2-212ENST00000538682 CRKLP46109 303 aaKnown RBP20.12■□□□□ 0.81
SLC3A2-212ENST00000538682 SLC39A6Q13433 755 aa20.12■□□□□ 0.81
SLC3A2-212ENST00000538682 GAS2L2Q8NHY3 880 aa20.12■□□□□ 0.81
SLC3A2-212ENST00000538682 ARHGEF1Q92888 912 aaKnown RBP20.12■□□□□ 0.81
SLC3A2-212ENST00000538682 RSPH6AQ9H0K4 717 aa20.12■□□□□ 0.81
SLC3A2-212ENST00000538682 PELP1Q8IZL8 1130 aaKnown RBP20.11■□□□□ 0.81
SLC3A2-212ENST00000538682 YBX3P16989 372 aaKnown RBP eCLIP20.1■□□□□ 0.81
SLC3A2-212ENST00000538682 DNAJC10Q8IXB1 793 aa20.1■□□□□ 0.81
SLC3A2-212ENST00000538682 N4BP2Q86UW6 1770 aaPredicted RBP20.1■□□□□ 0.81
SLC3A2-212ENST00000538682 DLG5Q8TDM6 1919 aa20.1■□□□□ 0.81
SLC3A2-212ENST00000538682 GNAT3A8MTJ3 354 aa20.09■□□□□ 0.81
SLC3A2-212ENST00000538682 MMP10P09238 476 aa20.09■□□□□ 0.81
SLC3A2-212ENST00000538682 PRKAR2BP31323 418 aa20.09■□□□□ 0.81
SLC3A2-212ENST00000538682 PHACTR3Q96KR7 559 aa20.09■□□□□ 0.81
SLC3A2-212ENST00000538682 NUDCQ9Y266 331 aa20.09■□□□□ 0.81
SLC3A2-212ENST00000538682 BRCA1P38398 1863 aaKnown RBP20.09■□□□□ 0.81
SLC3A2-212ENST00000538682 CEMIPQ8WUJ3 1361 aa20.09■□□□□ 0.81
SLC3A2-212ENST00000538682 GYS1P13807 737 aa20.08■□□□□ 0.81
SLC3A2-212ENST00000538682 RFC4P35249 363 aa20.08■□□□□ 0.81
SLC3A2-212ENST00000538682 INTS5Q6P9B9 1019 aaKnown RBP20.08■□□□□ 0.81
SLC3A2-212ENST00000538682 NLGN1Q8N2Q7 840 aa20.08■□□□□ 0.81
SLC3A2-212ENST00000538682 IL17REQ8NFR9 667 aa20.08■□□□□ 0.81
SLC3A2-212ENST00000538682 USP42Q9H9J4 1324 aaKnown RBP20.07■□□□□ 0.8
SLC3A2-212ENST00000538682 VSIG10Q8N0Z9 540 aa20.07■□□□□ 0.8
SLC3A2-212ENST00000538682 C10orf71Q711Q0 1435 aa20.06■□□□□ 0.8
SLC3A2-212ENST00000538682 U2AF1L5P0DN76 240 aaPredicted RBP20.06■□□□□ 0.8
SLC3A2-212ENST00000538682 CYP19A1P11511 503 aaPredicted RBP20.06■□□□□ 0.8
SLC3A2-212ENST00000538682 U2AF1Q01081 240 aaKnown RBP eCLIP20.06■□□□□ 0.82e-23■□□□□ 11.2
SLC3A2-212ENST00000538682 CCDC87Q9NVE4 849 aa20.06■□□□□ 0.8
SLC3A2-212ENST00000538682 SOS1Q07889 1333 aaPredicted RBP20.05■□□□□ 0.8
SLC3A2-212ENST00000538682 GRIN3BO60391 1043 aa20.05■□□□□ 0.8
SLC3A2-212ENST00000538682 TEFQ10587 303 aa20.05■□□□□ 0.8
SLC3A2-212ENST00000538682 ZNF784Q8NCA9 323 aaPredicted RBP20.05■□□□□ 0.8
SLC3A2-212ENST00000538682 PXDNLA1KZ92 1463 aa20.05■□□□□ 0.8
SLC3A2-212ENST00000538682 AFDNP55196 1824 aaKnown RBP20.04■□□□□ 0.8
SLC3A2-212ENST00000538682 FCHSD2O94868 740 aa20.04■□□□□ 0.8
SLC3A2-212ENST00000538682 SRP68Q9UHB9 627 aaKnown RBP20.04■□□□□ 0.8
SLC3A2-212ENST00000538682 TTC5Q8N0Z6 440 aa20.03■□□□□ 0.8
SLC3A2-212ENST00000538682 ZNF790Q6PG37 636 aa20.02■□□□□ 0.8
SLC3A2-212ENST00000538682 ZBTB1Q9Y2K1 713 aa20.02■□□□□ 0.8
SLC3A2-212ENST00000538682 COL15A1P39059 1388 aa20.02■□□□□ 0.79
SLC3A2-212ENST00000538682 HEG1Q9ULI3 1381 aa20.02■□□□□ 0.79
SLC3A2-212ENST00000538682 NRXN2Q9P2S2 1712 aa20.01■□□□□ 0.79
SLC3A2-212ENST00000538682 FKBP8Q14318 412 aa20.01■□□□□ 0.79
SLC3A2-212ENST00000538682 ZNF496Q96IT1 587 aaPredicted RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms